0	chr6	78037493	78037494	2000001	0	+	Chinese1; RIP_L1_chr6_078_01	CTCATGACCTTTCTTCATGT	CTGCTTTTGTGAATGATGAG	LINE	L1	Ta-1	ataaacagattttagagtgtgtgtgaatgactaatagattttaatgcctttaatcaatatatcataggagagggaaattaattaattcagcctgatgcac<br>tcagtagttcagaagccaataaaaaatctaaatggagatatgcattatgccattgtaaatgcaaatatgaatttaaaaaattatagatttgagcccctta<br>cttctgccacagagctcatgacctttcttcttgttttctccgtctaaggcacaccaaccctctttcttatttgactgtgtcatactgttgtctctgcaca<br>gaactctgctgtctcttaacctagccaattccttctcacctttttagttccaactttcttgtttcttccaactactcacagtacaaaggcaaccccatta<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>tgtgctctcatataattataaacttctcttcattacctcttattataaatgtaattatctaattatgtaaccatttgttt<br>aatctatctccacactgaaagctatatgctatgtgagagtgagcaggggtcatacctgcttcactatcccccgccctttttctcatcattcacaaaagca<br>gatcacaggattttgaacatataatgaacatataaagaaattaagaaatattaattaaataaatgaattaaggaaagaataaaacaaagagattatttgt<br>taccttggtacagctatgtttagttttcactgttactgctgtcattttgagatggaggggacttgagagtattttagaccttctatattatgttcagcga<br>gaggtctttcaatctttcat	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/48	NA	NA	NA	intergenic	
0	chr3	102762298	102762299	2000002	0	+	Chinese2; RIP_L1_chr3_102_01	TATGCTTGGAACGTGATAAG	TCAGTCTCTTAGACAAGATC	LINE	L1	Ta-1	acatgatagtaatcagtctcttagacaagatctcgttttttaaaatcatttggaaaagactatgcctaccttcttttattttagtaaactatatacaata<br>taaacatttccattttagtcattttcaagtgtacagttcaatggcattaagtacattcacgttcttgtacaaccatcactactatccatctccagaactt<br>tttcatcatcccatactgaaaattcatacctattaaacagtaactgcccattcttccctttccccagcccctggtaaacactattctactttctttcttt<br>atgatttgactattctaggcacttcatataggtggacttatacaatatttgtccttttgtgcctggcttatctcagtgtataatgcctccaaagtttatc<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>catgttgtaccatgtatcagaacttcattcctttttaagactgaataatattccattgtatgtacatgcaacatttttta<br>atctattcatctgttcatggatatttgggttgcttccaccttttggttattatcaataatgctacaatgacattagagtacaagtgtctgtttgtgtctc<br>tgctttcaatttctttgggtatattactaggagtagaatggctgcagaatatgttcattctgtgtttggttacaaatatatgtggaggctgaattggccc<br>caaaggccaccaatttacaaatgtgttttaatttcatttcacattaaactttccaaatgagctaggaggagacagaaacttaccgtggcttatcacgttc<br>caagcatagtgccaggtact	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/48	NA	NA	NA	intergenic	
0	chr8	73950330	73956377	2000003	0	-	238346; Chinese3; LID3; RIP_L1_chr8_073_01;AC213218	TATTAACACCAAGTGGAAGG;NA	TAGAATTGGTACAGAACTGC;NA	LINE	L1	L1HS	tcccagcctaccaaaatgataacgctgggttttatttttggaaaaagtacttttcatcttgtaaaaatttaatggcctttcagtgacagggaagttctga<br>gtggttttcactggctcttttctggccgcagcagaaggtggatgctacggctaggacctccccctgcttgaagggacagccagggagaggaaacacgccc<br>tctgcattgtctgggtgctgctgcttcacagattgtgcctgtacaacattttttctcttcttccctctctgagctagaggcagggcagaggtagccagac<br>ctttagaaaagattgccaatattaacatctaacttctgatagtacttttctgtctacagatgtttgagtgccttaattcctttatctttt<font color="green"><u>AAGATTTGCA<br></u></font><font color="red">GGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTACCG<br>GGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAA<br>GCGCAAGGGGTCAGGGAGTTCCCTTTCTGAGTCAAAGAAAGGGGTGACGGTCGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGA<br>CCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAG<br>ATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTTGAACTGGGTGGA<br>GCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTA<br>AGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACAGACTGCCTCCTCAAGTGGGTCCC<br>TGACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGG<br>GTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACC<br>ACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAAC<br>AAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGA<br>AGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGA<br>GAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAG<br>GGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGA<br>AAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAG<br>GAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAA<br>GGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGTGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGG<br>GCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATA<br>GACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGC<br>TGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAA<br>TTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTG<br>TGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGG<br>CAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCA<br>ACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCC<br>CACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTC<br>TGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACCTTTTTTTCAGCACCACACCACACCTATTCCAAAATTGA<br>CCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGG<br>ATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGA<br>TGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTA<br>CAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAA<br>GAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACA<br>AAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCAC<br>AGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTC<br>CCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAG<br>GACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACATGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCT<br>CCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATT<br>GATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAG<br>GCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTT<br>TGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACA<br>GCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGT<br>TGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGAT<br>TGTATATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCA<br>CAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCGTAATTGCTTCAAAGAGAATAAAATACCTAGGAATCC<br>AACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTC<br>ATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACA<br>GAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACAC<br>TACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGACATAGATCAATGGAACAGAACAGAGCCCTC<br>AGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAA<br>AACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTA<br>AAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAA<br>AGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAA<br>ATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGT<br>GGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCA<br>AATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGA<br>ACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACC<br>CAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGC<br>AAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGAT<br>GAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCA<br>TAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTG<br>GGAGATATACTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCC<br>TAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AAGATTTGCA</u></font>atgagcagagatttccttccacttggtgttaatataaaatga<br>tcatacatctgatcattaatataagacttggaccagggcttctaaaggttgaatatgcatctgaatcacctgggggatcttgttaaaaggtagattctga<br>tcctgtgtttgtggagcgggctgccaggctgctatggctcccaggtggttctgatgttgctggctcatggacagcacctgcaggagcaagggagggttca<br>ggataacagtagaggagggtgagaaggagaagatgcaggttccctctttttgttctgagggtgtgtctgttctcttctcacccaggataatcatccatca<br>tccaagcctacgtccttgggaggaagcctccgctaccagcaaaggccc	UCSC;UCSC	<UL><LI>Bennett EA, Coleman LE, Tsui C, Pittard WS, Devine SE. Natural genetic variation caused by transposable elements in humans. Genetics. 2004 Oct;168(2):933-51.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15514065">PMID:15514065</a>.</LI><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Sheen FM, Sherry ST, Risch GM, Robichaux M, Nasidze I, Stoneking M, Batzer MA,Swergold GD. Reading between the LINEs: human genomic variation induced by LINE-1retrotransposition. Genome Res. 2000 Oct;10(10):1496-508.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=11042149">PMID:11042149</a>.</LI><LI>Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R,Wilson RK, Eichler EE. A human genome structural variation sequencing resource reveals insights intomutational mechanisms. Cell. 2010 Nov 24;143(5):837-47.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=21111241">PMID:21111241</a>.</LI></UL>	E:Retrotransposon display:L1 display; E:Insertion-specific detection:PCR;E: fosmid-end sequencing	NA;NA	48/52;NA	NA;NA	NA;NA	NA;NA	intron:KCNB2:NM:004770:2/3;intron:KCNB2:NM:004770:2/3	
0	chr21	18439432	18439433	2000004	0	+	Chinese4; RIP_L1_chr21_018_01	GTATGTCAATTATACATGAC	AATGCCTATCAGGTCATCTT	LINE	L1	Ta-1	acatgaaaagccttaaagaaagcaggttatattcagaatcacattaacaaagtaaaggttcaaaacagtattatttttatataagaattacaactttgat<br>gctttgaaaataaattatttgtatgtcaattatacatgactaatttcaattttaagttgttattctttgtagtaacaaatctagaatattaatctttacc<br>ttgttaaaagcctgcttttatttactacaaatacattgtgtagtaaacaagatgttcaagtcagtaaagcagaacacttcaacatctctgctcattagaa<br>agtggcatttgggccgggcgcggtggctcaggcctgtaatcccagcactttgggaggccgagactggcggatcatgaggtcaggagatcgagaccatcct<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>ggctaacaaggtgaaacccccgtctctactaaaaatacaaaaaattagccgggcgcggtggcgggcgcctgtagtcccag<br>ctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagctggcagtgagccaagatcgcgccactgcactccagcctaggggacgagtg<br>agactacctttcaaaaaaaaaaaaaaaaaaaaaagcggcattcaatatgatattgaattcatctttaacctatatgtgaaaagatgacctgataggcatt<br>aaaaagttgttttttctgaatgcttgcttatatagcatagaatggagggtgggctgttaaaatgaggcaataacctgtttcattcggggtcaatgtgttc<br>aagaaagaaagcttgatatc	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/48	NA	NA	NA	intergenic	
0	chr6	85374878	85380939	2000005	0	+	L1HS222; Chinese5; 239250; RIP_L1_chr6_085_01;AC226594	TTTGTCAGGTAAGCTAGGTT;NA	TATTTGCCTACATTCATGGC;NA	LINE	L1	L1HS	taaagccaatactttagaaatgatatttgcctacattcatggcacaatgactttaaaatggaaggaaacacaagcatttatatcaacagctatagatggc<br>tattcatattctgaagagaaaaaaagagaaaaactgtaattgtagatactataagtcttaatatcaaataaaagccctggaattcagcattgtctttgta<br>tcctatatactattgtcaatgtattgagccaggaactaagattcatgagtctgatgaattacatttaatatctaaggcttaaatttaataaatttttcca<br>agagcacttaatagtttatgagataactgatgattatataagtaagatactgtgcttcactcttctggagataagaattatgttg<font color="green"><u>AGAAATGTGAGGGGA<br></u></font><font color="red">GAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCTACGCAGAAGATGGGTGATTTCTGCATTTCCATCTGAGGTACCG<br>GGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAA<br>GCGCAAGGGGTCAGGGAGTTCCCTTTCTGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGA<br>CCGGCTTAAGAAACGGTGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAG<br>ATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCTGGAAGCTCGAACTGGGTGGA<br>GCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCCGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTA<br>AGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTTGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGAC<br>CCCTGACCCCTGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCC<br>TGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAA<br>AGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAAGAACGCAGTTCCTCACCAGCAACAGAACAAAG<br>CTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTT<br>GAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGAAGGAGCTGAAAACCAAGGCTCGAGAAC<br>TACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGTGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCAAGAAGGGAA<br>GTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGT<br>GATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAA<br>TACAGAGAACACCATAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGC<br>AGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCA<br>ATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAACTGAAGGAGAAATAAAATACTTTATAGACA<br>AGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCA<br>AAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCA<br>CACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCT<br>GTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGG<br>GGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAA<br>GAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGGACTTAGACTCCCACAC<br>ATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAACGATACCCAGGAATTGAACTCAGCTCTGCAC<br>CAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACA<br>TACTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAGATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAA<br>AAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTC<br>TTTGAAGCCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGATGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGA<br>GAAAGCAGGAAAGATCTAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAACAAACACATTCAAAAGCTAGCAGAAGGCAAGAAAT<br>AACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAGAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATT<br>GATAGACCACTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAA<br>TACAAACTACCATCAGAGAGTACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAG<br>ACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCA<br>GATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTA<br>ACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGC<br>AAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGCCTGG<br>TTCAATATATGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTCTCTCAATAGATGCAGAAAAAGCCTTTGACA<br>AAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATCTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAA<br>TATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAA<br>GTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAGTTGTCCCTGTTTGCAGACGACATGATTGTTT<br>ATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGC<br>ATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTT<br>ACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCCTGGG<br>TAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATT<br>GGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGACCAAAGCTGGAGGCATCACACTACCT<br>GACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAA<br>TAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTG<br>GCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACC<br>ATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACA<br>AAATTGACAAATGGGATCTAATTAAACTAAAGAGCTACTGCACAGCTAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTT<br>CGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAACCCCATCAAAAAGTGGGTGAAGG<br>ACATGAACAGACACTTCTCAAAAGAACACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAAC<br>CACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTAA<br>CACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCC<br>CATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTG<br>GAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATG<br>TCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGA<br>ATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATA<br>CCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTT<br>AGAGTATAATAAAAAAAAAAAAAAAAAAAAAGAAATGTTTTTTTTAAAAAAAAAAAAAAAAA</font><font color="green"><u>AGAAATGTCAGGGGA</u></font>aagttaatattttatttcaaatt<br>tccttcttaatgactgagacattacaagaggagaaagaattgaaagggaaatatttacttataaaaccaaagaatttaaaaattaatcagaaaacactac<br>aaatatggtttcatttattcttctcctcctcttcttcctctttcttctccattttagaattcttccacagttaatagaaagagattagaaaataaccttc<br>cttaaattaagatatctgtacataaaaacctagcttacctgacaaacttcctgaagaatttggcaaagctcttggggtagatgtggatgttttctcctgg<br>tattcctcaaataccagcagagaaggtacactagttcctcacctaatccattatttcaggtc	UCSC;UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Bennett EA, Coleman LE, Tsui C, Pittard WS, Devine SE. Natural genetic variation caused by transposable elements in humans. Genetics. 2004 Oct;168(2):933-51.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15514065">PMID:15514065</a>.</LI><LI>Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R,Wilson RK, Eichler EE. A human genome structural variation sequencing resource reveals insights intomutational mechanisms. Cell. 2010 Nov 24;143(5):837-47.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=21111241">PMID:21111241</a>.</LI></UL>	C:Reference; E:Insertion-specific detection:PCR;E: fosmid-end sequencing	NA;NA	60;NA	6195;NA	118;NA	NA;NA	intergenic;intergenic	
0	chr9	9226253	9226254	2000006	0	+	Chinese6; RIP_L1_chr9_009_01	GACCACAAATGAATTGACAC	TAGATTCAGTAACTCTGGTG	LINE	L1	Ta-1	ctttttttttgttgttgttgtttggccatgatattctaaacatggaaagttaccttgcatgtctccatgaacttattagtctgagtcaattctaaacaat<br>aaggggttatatttaaaaagagcaaaattggccaggtgcggtgtctcatgcctgtaatcccagcactttgggaggctgaggcaggtggatcacctgaggt<br>caggagttcaagaccagcctggccaacatggtgaaaccctgcctctaccaaaaatacaaaaaagtagctgggcacctgtaaccccagctacccaggaggc<br>tgaggcaggagaattgcttgaatccaggaggtggaggctgcagtgagccgagactgtgccattgcactccagcctgggcaacaagaacaaaaccccatcc<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>caaaataaataaataaatacacaaataaggaacaaaattatttgagagagctctcatcccaaacaactatatttctgata<br>cctatgggaaaatcaaatttaaaaatggacacaaaggagtataaaagctagccttagatactcctttaataagattaaaaagcagaaattagattagaaa<br>caaagttaaaattcaaatccacccataaattctcctctctgccctcttatactctctcaacttcctgggagtccctgacactccagatcttttgcatttc<br>tggtccccagatttaaaattccctttttctaaatctagctccatttccttagtacattcctttagctaaagaatgaattatttgtttgaattcatttgaa<br>ttatgacttttggttttggg	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/45	NA	NA	NA	intron:PTPRD:NM:130392:8/44	
0	chr5	77383437	77383438	2000007	0	-	Chinese7; RIP_L1_chr5_077_01	CGAGTCTGTGCTTATATGTA	ATCCACATTTAGTTACCCAG	LINE	L1	Ta-1	ttaccaaaataagaggtgagaaagtcttgtgtgctttataatgtatagtgattactaaaataaaatatgagaaattatcataaatttgtatatcaaaatt<br>tatatacataaggaagaagttatctttagtattaaaaaccatttatttgaagtaatatttgctggaagattcaaatatatttcttcgagtctgtgcttat<br>atgtaagagttaaccaaatttgccgtttacttttttaaatcctattctaggtcaatactaggttaatgctagcctcaatgaaatggattgaaggtaaaat<br>caagacccactttctacagtttataggataaatgagacaatactgtgactttctgcattacaaatcttatcaattgagacatacattggttttaaaagta<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>ctaattttaaagatgaagctgtgcctctgtttatagctattttcttacctcgtcatttttataaattatatatcaaaata<br>gatactgatgtaaagtaagccaaacaaaactagatacaaagagcattttatatactgcagattttcatatctttgaaattcaaaaacagaatggattgat<br>aatacttaatgactgggtaactaaatgtggattaaagcataaaaggctgggaaacattgttttcataaagctttacgtggaaatgtcatctttgaatagt<br>aatgtggatgctgaacaaggcttattccaaggcacttacttgctattccatgttttatttttcgaatctcattttaaattttataattcaatcattttga<br>acagctatgttcaaaagaag	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/48	NA	NA	NA	intron:AP3B1:NM:003664:22/27	
0	chr2	23044768	23044769	2000008	0	+	Chinese8; RIP_L1_chr2_023_01	CTTATGCTCTTACTAGTGTC	TCTGATGTGACTCTTGAATC	LINE	L1	Ta-1	aatgaaaaatgcttttcactacaaattggtaagaatcacaagatggcaacagcagagcattaaaccaagtgtggggtcctgtgcaattgcatgagtggtg<br>tattagtccattctccctctgctattaggacatacctgagactgggtaatttataaaggaaagaactttaattgactcacagttccgcatggctagggag<br>gcctcatggaacttacaatcatggtgaaagggaaagccaatatgtccttcttcacacggtggcagcaaggagaagtgcagattgaacatgggaaaaaacc<br>ccccgataaaactatcagatctcatgagaactcactcactatcacaagaacagcatggaggtaaccacccccatgatgcaattacttcccagcaggttcc<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>taccacaatacatggggattacgggaactacaattcaagatgagatttgggcagggacacagccaaccacatcagacggt<br>gtgctcagggaagcctaactgcctggcttcttacttccctcatctttgttccagtgtcaccatatattagagaagtcattcttctcaccattctatgtgg<br>gatagttactcctgtggcactctttgtttctttcccttgttttgcagttctccttagcacttgccaccagctaatctactctgcactaaatcatttactt<br>ctttctttggtgtctatctcctcctgtggaaatataagggccatacatgctttatcacccagggtatagaatatgcccaccacagagtagccactcaaat<br>atttgctgattgaatgaaca	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/48	NA	NA	NA	intergenic	
0	chr12	12824628	12824629	2000009	0	-	Chinese9; RIP_L1_chr12_012_01	CACTAGTGATTAAGGATGTG	AATTCATAGTGCACCAAGTG	LINE	L1	Ta-1	acttgagcccaggaatacaataccagcctgggcaacatggcaaaaccccatctctacaaaaactacaaaaattagctgtgtgtggtggcctgtgcctgca<br>gtcccagctactgggaaggtggaggtgggaggatcgcttgagccccggaggcagaggttgcagtgagccaagattgctccactgcactccagcctgggtg<br>gcagagccagactctgtatcaaaataaataaataaataaaattgaaataaaaaataaaattgagacaacttgtaaatgtgaggtttagtccaaaggtctt<br>gcagactttcctttgtcatctgttctaatatgtacattcaccaaaataaaaataaattcggccaggcacagtggcttatgcctgtaatcccagcacttcg<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>ggaggctgaggcaggcgcctcggtggtgtgtgcctgtagtcccagctacttggtacttgggaggctaagctgggaggatg<br>gtttgagcctgggaggtgaggctgcagtgagccgagatcacaccactgcactccagcctgggcaatagagccagacattgtctcaaaaaaaaaaaaagca<br>aattaaaataataacacatattcacctgaggatttttgcccatgatttctttgaatttccccagaatgtaagtgctctagaacatagtcaagctctcata<br>gttgcttgttgaatttaactaaagaaaaatgctttgttcacttaaagaaatatcattattttataacaattttataagaatttaacataaaattttctct<br>tggactatacagcttggtat	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	52/52	NA	NA	NA	intron:APOLD1:NM:001130415:1/2	
0	chr6	78805907	78805908	2000010	0	+	Chinese10; RIP_L1_chr6_078_02	TCTGTGCATGTCAGTAAATG	GGCATAAAGTAAGCTACATC	LINE	L1	Ta-1	attaaagtcagaaaaacatgatagttaaaactacaatacattattagcagaattgagttaattttggaagctctcattaatgagatgacaattgtggcat<br>aaagtaagctacatctgattagaagtatataattacatattcgatattaactttaaagaaggaaataagaataatttttctcttatttcctctttaatga<br>acaagacattaaagaattgaagacataaacaatattttagtagatttaaatgaaagagataaataatgagcaaagaaaaatttatattagagtgaaaatg<br>tagggcttgcataaaagatcaaatgtaggaaaattaaagactgcactaaagcatattaaaaagattgtcactttcagaacaatcttcaattatcagtcat<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>aaaaacagaaatgcttacgtttctgaaagaaatatttatcatacaattaattctcactttgatttgagagacaagttttc<br>tgagatttaaattttcctaattttttcttttattattaatcaatgattcattcagtcattcattcattcatccattcaacaattatgtatccagggccaa<br>tcatggattaaagcgaaccgacttaagagttttaatatattaataatgtctcataaagatactttgaaaattggctgcatagtatttttattaaggtaaa<br>tttacatttactgacatgcacagatcttatgtttttaatctattgagatattttatacctcagttataataaggcataatttgaatacattaaaattcat<br>ctacctttttggaagtaaag	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/48	NA	NA	NA	intergenic	
0	chr4	94778478	94784513	2000011	0	-	238931; L1HS418; Chinese11; RIP_L1_chr4_094_01;AC216113	GTCTAACATAAGCTCTAACG;NA	AGCACCAAGAATATAAGAGG;NA	LINE	L1	L1HS	tgaatgattttgagtcactttactgaatacattctggttaagaagtaatttgtttggcaaatttctgcacttgctaaaaacatgcagaaaagaggaaatt<br>aatactagtaaaattcatgctgattagcaccaagaatataagaggctccctagaagggccacgatggtttttttagggagtactaaagggatcttggttc<br>attaatggaaaatacacagaaaattgagaaaaatcatcagaacaaaaattttactatcaaaaccactattttggataaagattaaaaaccttacagagta<br>gaaatctcacgattttttttagcgtgccagttcctttctgtcatgccatggacattgctcatggaacattggtaaaaatatcatt<font color="green"><u>AAGATGCAAGTTTTA<br></u></font><font color="red">GTGGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGT<br>ACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTG<br>GGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTT<br>CAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCGGATTGCTAGCACAGCAGTC<br>TGAGATCAAACTGCAAGGCGGCAACTAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCTGGAAGCTCGAACTGGG<br>TGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGA<br>CTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCAAGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCC<br>TGACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGG<br>GTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACC<br>ACAAAGATGGTGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAAC<br>AAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGA<br>AGCTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACGAAGGCTCGA<br>GAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGGAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAG<br>GGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACATCTGATTGGTGTACCTGA<br>AAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAG<br>GAAATACAGAGAACGCCACAAAGATACTCCTCAAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAA<br>GGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGG<br>GCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATA<br>GACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGTGCTAAACATGGAAAGGAACAACCGGTACCAGCCGC<br>TGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAA<br>TTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTG<br>TGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGG<br>CAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCA<br>ACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCC<br>CACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTC<br>TGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGA<br>CCACATACTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGG<br>ATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGA<br>TGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTA<br>CAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAA<br>GAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACA<br>AAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCAC<br>AGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTC<br>CCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAG<br>GACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACATGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCT<br>CCCTAACTCATTTTATGAGGCCAGCATCATTCTGATGCCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATT<br>GATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAG<br>GCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTT<br>TGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACA<br>GCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGT<br>TGGAAGTTCTGGACAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGAT<br>TGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCA<br>CAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCC<br>AACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCGCTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTC<br>ATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACA<br>GAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAACCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACAC<br>TACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTC<br>AGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAA<br>AACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTA<br>AAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCATGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAA<br>AGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAA<br>ATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGT<br>GGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCA<br>AATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGA<br>ACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACC<br>CAGCCATCCCATTACTGGATATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGC<br>AAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGAT<br>GAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCA<br>TAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGTGGGATAGCATTG<br>GGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACC<br>CTAAAACTTAGAGTATAATTAAAAAAAAAAAAAAAA</font><font color="green"><u>AAGATGCAAGTTTTA</u></font>aatatgttttcttaggcagcaacatacaaaataaaaacatgttgatttt<br>gatcattttcattagttactaacatttaaaaaataaagagctttataaaatgacagaagcagaatggattattatgaaaaaagtaaatgaacacattgag<br>gtacatatttctctatttgaaattggtattaaaacagagaactacgttcacaaagacagaaatcgttagagcttatgttagacttacctgggctatatag<br>aataatgactcttattccatataaaaattcttatatttttatcttagtaataattcatgtctagaagtatcagattctgtttcatattagtaaacgttta<br>acatgtgagtagactgtctgaccaattatgatgtta	UCSC;UCSC	<UL><LI>Bennett EA, Coleman LE, Tsui C, Pittard WS, Devine SE. Natural genetic variation caused by transposable elements in humans. Genetics. 2004 Oct;168(2):933-51.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15514065">PMID:15514065</a>.</LI><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R,Wilson RK, Eichler EE. A human genome structural variation sequencing resource reveals insights intomutational mechanisms. Cell. 2010 Nov 24;143(5):837-47.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=21111241">PMID:21111241</a>.</LI></UL>	C:Reference; E:Insertion-specific detection:PCR;E: fosmid-end sequencing	NA;NA	60;NA	6380;NA	328;NA	NA;NA	intron:GRID2:NM:001510:14/16;intron:GRID2:NM:001510:14/16	
0	chr2	144334996	144341035	2000012	0	+	Chinese12; RIP_L1_chr2_144_01	CCCTGTTCTACAACATTACT	TTAGACTCTGGAACTCAAAG	LINE	L1	L1HS	tttctcatagagagaaacagctgagaaacctacagaccatcaaattatgactccagtgtttcattacaagcaattagactctggaactcaaaggtacaac<br>caaaatgctcagtgtaatttggttaataccatttaagagctgggccacaggtgcttaaatctacagaacagaaaaattctagcgactatatagggtccta<br>ttactttatgggtaattacttgtatagctagagcctcaaaggtggactcaggagaaaatacatgtgaagtgaggagaaagactgaaaattacacatattc<br>attccacaagcaatgactgtgaatggctaccctgtgtcaggcacagttcctctcaaggaactcaaaccccaacaggaaagatgggc<font color="green"><u>ATAAATTCTTTCCT<br></u></font><font color="red">GGGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTACTGCATTTCCATCTGAGGT<br>ACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCAAAGCAGGGCGAGGCATTGCCTCACCTG<br>GGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTT<br>CAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTC<br>TGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGG<br>TGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTACAGA<br>CTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACCGGCAGACTGCCTCCTCAAGTGGGTCCC<br>TGACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGG<br>GTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACC<br>ACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGTCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAAC<br>AAAGCTGGATGGAGAATGACTTTGACGAGCTAAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGA<br>AGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGA<br>GAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGTGAGAAG<br>GGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGA<br>AAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAG<br>GAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATGGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAA<br>GGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGG<br>GCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATA<br>GACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGC<br>TGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAA<br>TTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTG<br>TGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGG<br>CAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATCATGGTAAAGGGATCAATTCA<br>ACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCC<br>CACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAATGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTC<br>TGCACCAAGCAGCCCTAATAGACATCTACAGAACTTTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGA<br>CCACATAGTTGGAAGTAAAGCTCTCCTCAACAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGG<br>ATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGA<br>TGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATTGCACTAAATGCCTA<br>CAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAA<br>GAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACA<br>AAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACCAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACA<br>GAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCC<br>CAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGG<br>ACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTC<br>CCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTG<br>ATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGG<br>CTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTT<br>GACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGATGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAG<br>CCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTT<br>GGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGTTT<br>GTTTATCTAGAAAACCCCACTGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCAC<br>AGGCATTCTTATACACCAATAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCA<br>ACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCA<br>TGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAG<br>AATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACT<br>ACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACACAGCCCTCA<br>GAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAA<br>ACTGGCTATCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACATTAAACCTAA<br>AACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAA<br>GCCAAAATTGACAAATGGGATCTAATTAAACTCAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAA<br>TTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTG<br>GGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAA<br>ATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTAGAGAGGATGCGGAGAAATAGGAA<br>CACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCC<br>AGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGTGGCACTATTCACAATAGCA<br>AAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATG<br>AGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCAT<br>AGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGG<br>GAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCC<br>TAAAACTTAGAGTATAATATAAAAAAAAAAATAAAATAAA</font><font color="green"><u>ATAAATTCTTTCCT</u></font>tcagcaaacactgaatagtgctgtaagaaagaaatatctatatgac<br>ctgttagtaatgttgtagaacagagtgcttatgtattcaaacacttaggaagttatcactaataaatgacattgatctgtgtatagaattaaaaggaagt<br>ttccatgtggaaaagggcatcacctgacaggaaagacagccaggaaaggcaagttgaggtgagagcccttaaaaattatggaatttggacatggtttcta<br>gatactaagaatcatggagggtatttgagggtcaccaggcagggtcatttctgagaaacctcttctaggaagcacatccaaaaacggtaggcaaaatata<br>aaagatgccactttgcaatgcctagatgagcttctgtaat	UCSC	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	48/48	NA	NA	NA	intergenic	
0	chr14	47187693	47187694	2000013	0	+	Chinese13; RIP_L1_chr14_047_01	CTCAAAGAACGATCGTAATC	GTTAATGTGATAGCTGTAGG	LINE	L1	Ta-1	tagtatattctcagtaaatggtattattatgggcatgattataaattcccttatctttccaatgacagtatatgccatttgaagacaaaaaccattttta<br>tagttctttgagtgtttccctcaatgactagaaagtagcctgctatatacataatgtctaataatgatttgctcaaagaacgatcgtaatcaaaaataaa<br>tagagggcaataagtgctaaaccataaggcactgaaagataagcacaagcaaagttcagctgcaaagaatatctgagtgggctggtatagtcagagaaag<br>atctatggcagacaggggaccaggaatgggaagtaaaagcctttcataggtagcataagactggataaataaaatcacccaatgttctctgcagaataca<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>tttcagaagcatattttgacctaattgaagtgttcttaaaataaagttcataagaaagtgttcataaaatcacttaactt<br>tggaatttcttcatgttgtgttcaacacttctttcttaaaccatatttaaacagatcttctttagaatacaaacagaaatggagaagagataatacattt<br>ttacctaaaattatattaacatcaattgtacctacagctatcacattaacacttaaaaatgatggtttatatatgtattctgacctcatgtctagtacct<br>agaggaaataattatttagtaatatcaatacatttttaaatgtctaaaattcatcatataaaatatttgtatactcattaaatgttttaattattatttc<br>catagtcatagtgattaaga	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/48	NA	NA	NA	intron:MDGA2:NM:001113498:1/17	
0	chr4	104092569	104095056	2000014	0	-	Chinese14; RIP_L1_chr4_104_01	GAACACACTTAGTACATGCT	ACTTGTTTAGACTAACCTAC	LINE	L1	L1HS	ctctgattaacaattttcattagtaatgtgttacacaaccagtacttgtttagactaacctacattttaccaatttctttgcacattgttccttcctttt<br>tggttctatgtcatatttctaaagcatatctttcagtagatttttccctggtaaaaaatggcatatgttcttaaatgtatttgtttgacaatatctttca<br>tttgtcttttgtttgagtgacagttaactggctacagaattcaacattgaatgatttctttatctctgtactttgaagactttatttatcttccatcttc<br>tattgttgctgataagtactgagaatctgctctattgtttattcgattatgattaatctctttttctctgtctagattcttt<font color="green"><u>AAGATTTTATTTTTGCCT<br></u></font><font color="red">GAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACAT<br>CAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGA<br>GCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTA<br>TTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAAC<br>CAGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATT<br>CAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGA<br>TAAGCAACTTCAGCAAAGTCTCAGGATACGAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGG<br>TGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTG<br>CTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAA<br>TTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCG<br>CATTGCCAAGTCAATCCTAAGCCAAAAGAATAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGG<br>TACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGA<br>AAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACC<br>TTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATA<br>GGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAG<br>CAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGACTAATATCCAGAATCTACAA<br>TGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCC<br>AAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCGATC<br>ATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGA<br>AGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTG<br>CTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAG<br>AAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTC<br>TCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATAT<br>CACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAG<br>CATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AAGATTTTATTT<br>TTGCCT</u></font>ttggtagtctatagtttctcaacattttatctaagtatctatttttacttaatcctgattagaactcatttgacttcctgtgtccaaatcaata<br>aaaaccctaatcaattctgtaaagtttgaagccagttttcttctcaaatattatatcttcttcattctttcaattatgtttctgaaactactattagttg<br>tgttttagatcttttccataatctaaatctctcattttccacctcatttttttgtgtgtgtgtgctatgctcttaagtaatttcctcatatctactactt<br>tgctgtgttctctcttcagccatgtctagactgctgtttgggtacttagtggttttttttttagttgagtaaattttacagttttttc	UCSC	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	48/48	NA	NA	NA	intron:NHEDC1:NM:001100874:3/12	
0	chr3	24962867	24962868	2000015	0	-	Chinese15; RIP_L1_chr3_024_01	TGTTCTCCTTGACACCTTAT	TCAGCATGTCTTTTCAATGG	LINE	L1	Ta-1	cacctcagtttcttgggagctgggactacaggtgtaccacatctggctaagttttatctattttttgtaaagacaggatctcactatgttgcctaagctg<br>gtctctaattcctgggctcaagtaatcctcctgcctcagcctcccaaagtgccaggattacctatgtgagccaccacacccgaccaagccttgctaatat<br>taatgtatcattttttagaactctaggttttttaagcacacattatgttatagtagaaacatctgcattagaaataacttggcaaccatatttgcaagac<br>attttgcaaagaaagaacagcactcttcattaaatgctgtctccaacttcccaccaccttctaatttctaaaggcaatgaatttagttaaaaaattatca<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>ctctgaactggctcgggtttcaaaaaaattaactcaactctggaaaaatactgtatttgtccatcaactatacttgaatt<br>tcagtgatttctttttttttttttttttgagatggagtctcattttgtcccccaggctggagtgcagtggtgtgacctcggctcactgcaagctctgcct<br>ccaggttcacgccattctccttcctcagtctcccgagtagctgggactacaggcagctgccaccacacctggctgattttctgtatttttagtagagaca<br>gggtttcaccgtgttagccaggatgatctcgatctcctgacctcgtgatctgcctgcctcggcctcccaaagtgctgcgattacaggcgtgagccaccgc<br>gcctggccagcgattcttaa	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/48	NA	NA	NA	intergenic	
0	chr11	60608321	60610492	2000016	0	+	Database16; L1HS26; AC003689; RIP_L1_chr11_060_01	AGTGTGTTATAAATGTAACT	TGTGATACATTTAAAGTTCA	LINE	L1	L1HS	cctcgaggccactctacaattgggaaagcacctgcctctgtaattgtggctttgtgtgtttcacaccctccttggtctccagctctctgagaaaaagtcc<br>tgtttactctgtgatatgcaggtatctgcgggtggcagcagagcttcaagcttaaaagatgtagactttgtatgaccaaatgcctgtcgtggttgaatgt<br>ggaaataaatggtggtacagtcacacaacagaatactatacagcaatgaaaaagaacaagctcctatacacaataacatggatgaatcgtccaagaataa<br>tgagtgaaaaaaattgaaacacaaaaggtataaactttgtgatacatttaaagttcaaagaaaagggccaggcac<font color="green"><u>GGTGGCTCACACCTGTAATCCTAGC<br></u></font><font color="red">ACTTTGGGAGGCTGAGGCAGATGGAGCACTTGAGGCTAGGAGTTCAAGACCGGCCTAGCCAACAAGACGAAACCCCGTCTCTACTAAAAAAATAAAAATT<br>AGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAA<br>AATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAG<br>AGAGCCAGATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGA<br>GAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCC<br>ATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGA<br>ACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGT<br>AACCAAAAGAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATC<br>TTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGG<br>ATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCAT<br>TACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTA<br>AAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAA<br>TATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGA<br>AGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCA<br>GTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAG<br>TTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGA<br>GTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATG<br>ATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAAT<br>TGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACA<br>CAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTG<br>GGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAA<br>AAAAAAAGAATAAAATCTAAATTTCTTAAAAAAAAAAAAAATAAAAAAAATAAAAAATAAAAATTAGCCAGACGT</font><font color="green"><u>GGTGGTGCACACCTGTAATCCCAGC<br></u></font>tgctcgggaggctgatgcaggagactcatttgaacctgggaggcggaagctgcagtgagccaagatggcaccactgcactccagcctgggtgacagactc<br>ttgtctcaaaataataaataaataaaataaagttcaaagaaaaggcaaagccaatctatgatgacagaagtcaggacagtggatacttgggtagggagca<br>gtgcggggcagtggggagcctcccaggtgctggttacaccagcacgtgcagtgtgtgaagttacatttataacacactgcatgtactgtgctgtgtgtat<br>cccatatataagtaaaaagttgttgttgttttaaattaagcatctgggttccagcccagctttaccacctggatg	UCSC	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Boissinot S, Chevret P, Furano AV. L1 (LINE-1) retrotransposon evolution and amplification in recent human history. Mol Biol Evol. 2000 Jun;17(6):915-28.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=10833198">PMID:10833198</a>.</LI></UL>	E:Library screening:TE-specific hybridization; E:Insertion-specific detection:PCR	NA	48/48	NA	NA	NA	intergenic	
0	chr7	113203413	113209443	2000017	0	-	AC002385; Database17; RIP_L1_chr7_113_01;AC206740	TGCCTGGTAAATTTGTATTC;NA	TATCTTAATGTCTATAAGAA;NA	LINE	L1	L1HS	gagaatctaccttttcctgagattgacatcctgacatgatgatgaaaataatcaagttaaaggaatttgacatgccaccaatcctttcttaatttattta<br>ggattccagtctgtatcaggaattatgccaggtatttgatatttagagttaaataaagtgaattttctaatctcaaatatcttaatgtctataagaagaa<br>cagacatgtgaataatatatatctgtcatatatttataacacctagtcagaacctggcatactgagggcaatttaatagtaatagtaatagtacccctac<br>tggtagtaataataataatgtctgatattgaaagtttattaaataccaggaatttttttgaggaccttattcatttattgctctt<font color="green"><u>AAAAATGCCATTATG<br></u></font><font color="red">GGGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTA<br>CCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGG<br>GAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTC<br>AGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCT<br>GAGATCAAACTGCAAGGCGGCAGCGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGT<br>GGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGAC<br>TTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGGACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCT<br>GACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGT<br>CCTGTCTGTTAGAAGGAAAACTAACAACAAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCAC<br>AAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAA<br>AGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAG<br>TTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGA<br>ACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGAG<br>AAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAACCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAA<br>GTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGA<br>AATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAACTTGAAATGAAGGAAAAAATGTTAAGG<br>GCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGC<br>CAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGA<br>CAAGCAAATGTTGAGAGATTTTGTCACCACCAGACCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTG<br>CAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATT<br>CACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTG<br>CTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCA<br>GGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAAC<br>AAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCA<br>CACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTG<br>CACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACC<br>ACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGAT<br>TAAGAATCTCACTCAAAGCTGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATG<br>TTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACA<br>AGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGA<br>AATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAA<br>ATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAGAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAG<br>AAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCC<br>AAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGA<br>CCAGATGGATTCACAGCCGAATTCTACCAGAGGTACATGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCC<br>CTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGA<br>TGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGC<br>TGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTG<br>ACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATGTATGACAAACCCACAGC<br>CAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTG<br>GAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTG<br>TTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACA<br>AGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAGATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAA<br>CTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCAT<br>GGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGA<br>ACTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACGCTA<br>CCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATGTAGATCAATGGAACAGAACAGAGCCCTCAG<br>AAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAA<br>CTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAA<br>ACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAG<br>ACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAAT<br>TTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGG<br>GCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAA<br>TCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAAC<br>ACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCA<br>GCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAA<br>AGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGA<br>GTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATA<br>GGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGG<br>AGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCT<br>AAAACTTAGAGTATAATAAAAAAAAAAAAAA</font><font color="green"><u>AAAAATGCCATTATG</u></font>tagatgcatgatttgtccattttctttatgacaaaactaaagctcagatggtca<br>ttgtgtcaaggtgttaacttggtaccatggccagctctatctggtgataccaaggaaaacttcacagatgtgctgaactctgaagaaagaatacaaattt<br>accaggcagaaaaatcaaggcagtggataggcaaagggaacagccagtgtaaagaggcaggagagataaaaaggagtagaaatctgagtatttcagtcaa<br>ctgcaactttagagtctagacagagaacgaagatgaatttgcagaagcaggtaggtggtcaatcaaggaaggaagatgttacttgcaatagtaagggttt<br>aaatgtaacaaagaagagggataaggtgtag	UCSC;UCSC	<UL><LI>Brouha B, Schustak J, Badge RM, Lutz-Prigge S, Farley AH, Moran JV, Kazazian HHJr. Hot L1s account for the bulk of retrotransposition in the human population. Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5280-5. Epub 2003 Apr 7.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12682288">PMID:12682288</a>.</LI><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Boissinot S, Chevret P, Furano AV. L1 (LINE-1) retrotransposon evolution and amplification in recent human history. Mol Biol Evol. 2000 Jun;17(6):915-28.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=10833198">PMID:10833198</a>.</LI><LI>Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R,Wilson RK, Eichler EE. A human genome structural variation sequencing resource reveals insights intomutational mechanisms. Cell. 2010 Nov 24;143(5):837-47.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=21111241">PMID:21111241</a>.</LI></UL>	E:Library screening:TE-specific hybridization; E:Insertion-specific detection:PCR;E: fosmid-end sequencing	NA;NA	48/48;NA	NA;NA	NA;NA	NA;NA	intergenic;intergenic	
0	chr17	65966693	65972771	2000018	0	+	Database18; AC005939; RIP_L1_chr17_065_01	AGATATACATTTAGTCATGC	CAAGATAACCACTCACATTA	LINE	L1	L1HS	tggtggaaggcaaggaggagcaagtcacatcttacatggatggtggcaggcaaaataggagcttgtgaagagaaactcccatttttaaaaccatcagatt<br>tcatgagacccattcaccatcacgagaacagcatgggaaagacctgcccccatgattcaatcacctttcactggatccctcccacaccacgtgggaatta<br>tggaagctacaagatgagatttgggtggggacacagagccaagccatatcactactgcaacttatttttactttatcaatgttttaatttttaaagcttt<br>ttcactcttttgtaataacgcttagcttaaaacacaaacacatggtcagctgtacaaaaatattttctttccatatattgttattctac<font color="green"><u>AAGATTTTGTG<br></u></font><font color="red">GGGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTA<br>CCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGG<br>GAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTC<br>AGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCTCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCT<br>GAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCAGGGAAGCTCGAACTGGGT<br>GGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGAC<br>TTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCT<br>GACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGG<br>TCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCA<br>CAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACA<br>AAGCTGGATGGAGAATGATTTTGATGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAA<br>GTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAG<br>AACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGG<br>GAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAA<br>AGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGG<br>AAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAG<br>GGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGG<br>CCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAG<br>ACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCT<br>GCAAAATCATGCCAAAATGTAAAGACCATCAAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAACT<br>TCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGT<br>GCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGC<br>AGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAA<br>CAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCC<br>ACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCT<br>GCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGAC<br>CACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGA<br>TTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGAT<br>GTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTAC<br>AAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAG<br>AAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAA<br>AATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACA<br>GAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCC<br>CAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATCGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGG<br>ACCAGATGGATTCACAGCCGAATTCTAGCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTC<br>CCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTG<br>ATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGG<br>CTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTT<br>GACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAG<br>CCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTT<br>GGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATT<br>GTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCAC<br>AAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCA<br>ACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCA<br>TGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAG<br>AATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACT<br>ACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCA<br>GAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAA<br>ACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAA<br>AACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAA<br>GACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAA<br>TTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTG<br>GGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAA<br>ATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAA<br>CACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCC<br>AGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCA<br>AAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATG<br>AGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCAT<br>AGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGG<br>GAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCC<br>TAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAGTTTTAAATTAAAAAAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AAGATTTTGTG</u></font>tactatgaac<br>tttttttatttttttttacttctcaaagttttttgtttaaaactaagatacaaatacacacattagcctaagtctacacagtgtcagaatcatcaatatc<br>actgtctttcactgtcacatcttgtgccactggaagatcttttggaacaataacgtgcatggagctgtcatctcctataataacaatgccttcttctgga<br>acatcccccgaaggatctccctgaggctgttttacagttaacttttttttctaataagtagagggagtatactctaaaataatgattgaaagtttaatat<br>agtaaatacataaaccagtaacatagttgtttatgatcattatcaagtattatgtactgtagatagttgtatgtgctgt	UCSC	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Boissinot S, Chevret P, Furano AV. L1 (LINE-1) retrotransposon evolution and amplification in recent human history. Mol Biol Evol. 2000 Jun;17(6):915-28.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=10833198">PMID:10833198</a>.</LI></UL>	E:Library screening:TE-specific hybridization; E:Insertion-specific detection:PCR	NA	48/48	NA	NA	NA	intergenic	
0	chr7	73851531	73851532	2000019	0	+	L1HS44; Database19; AC004883; RIP_L1_chr7_073_01	ATATGCCTTTCTGTGCTCAT	AAAGACACCTTTGATGAGGT	LINE	L1	L1HS	agagtgcctggtttgtggtgataatgactcattgcagcctggaactccctgggctcaggtgatcctcccacttcagctcccagttgctgggactacaggc<br>atgcaccacaccgagctatcttttctttctttctttcttttctttttttctttttcttttttttttttttttgtagagctggagtcttaccttgttgccc<br>aggctggtctgaaaccccaggctcaagcgatccacccgccttggcctcccaaagtgctgggattacaggagccaccgtgccaggcctcatccttattttc<br>aaaagtacatgagccaaacaaaagacacctttgatgaggttcagcatgtagctgtgcttgttatgtccagtttaaacaggaattattt<font color="green"><u>GATAATATGTTT<br></u></font><font color="red">AATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCT<br>AGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTT<br>TCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAG<br>ATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTA<br>GCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATA<br>TGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCAT<br>TTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTG<br>AAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACA<br>ACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACC<br>CCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCAT<br>CAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGC<br>GGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAA<br>TACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACT<br>ATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCC<br>ATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCA<br>TATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGA<br>GGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATG<br>TGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>GA<br>TAATATGTTT</u></font>gcattttctttttagagacagggtcttgttctgtcacccaggctggagtgtagtattgcaattatggttctctgctgtctcaaactcctg<br>agtttaagtgatcctcctgctttagcctgccaagtagctggggctacaggtgtgagccactgtttccagctaatttttaaattttttgtagagatggggt<br>cttgctatgttgcccaggctggtctcaaactcctggcctcaagcaatcctcttgccttggcctccaaaagtcctgggattataggtgtgagcattttaat<br>atattttctcatttgattcccaagaaaactttgtaataacagagatgggaatgagcacagaaaggcatatgatttttacctactgtgagtctcaaatg	Other	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Boissinot S, Chevret P, Furano AV. L1 (LINE-1) retrotransposon evolution and amplification in recent human history. Mol Biol Evol. 2000 Jun;17(6):915-28.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=10833198">PMID:10833198</a>.</LI></UL>	E:Library screening:TE-specific hybridization; E:Insertion-specific detection:PCR	NA	57	2288	478	NA	intron:GTF2IRD2:NM:173537:15/16	
0	chrX	118453450	118459702	2000020	0	-	Database20; AC004000; RIP_L1_chrX_118_01	ACAAAGAGTGACCCAAGAT	TCTTCAGTGGATGTCTTACT	LINE	L1	L1HS	tgtattattattattattttttgagatggagtctcgctctgtcacccaggctggagtgcagcggcgcaatctcggctcattgcaacctccgtctcccggg<br>ttcaagcgattctcctgcctcagcttcctgagtagctgggattacaggtgtgcaccaccaggcctggctaatttttttgtatgttagtacagacggggtt<br>tcaccatgttgcccagctggtcttgaactcctgacttcatgtgatccacctgcctcggcctcccaaagtgctgggattacaggcgtgagccactgcgcct<br>ggccacgtacagtgatttttaaaaatcagatccttttactcacctgcttaaaacattttaatgactttacatcacactt<font color="green"><u>AGAATAAAATCTAAATTTCTT<br></u></font><font color="red">GGTGCTTCCCAGGAAGATCTGGGAAGCAGGATCTGGGCCCGGTGGAGCAGGTACTGTAAAATCTTAATCACTGTAAAATCCAAATCAACCACAAAAATGA<br>GTACGTGCAAATAATTCACACCAGGAAAATTCAGTAAGCTTTTAAAAAGACACAGATGATCCCTTTTAAAACAAAGCATTCTTATCCTCAAAAACTGAGA<br>TGAAAAAGAAAACAAAGCGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGC<br>ATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAG<br>GCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCC<br>GAATATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACGACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATT<br>GCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGG<br>GAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGC<br>AGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGTCTGCCT<br>CCTCAAGTGGGTCCCTGACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACA<br>GACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCA<br>AAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCT<br>CACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCA<br>AACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTG<br>AAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCACCAATGGAAGATGAAATGAATG<br>AAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATGTGGGACTATGTGAAAAGACCAAATCTACGTCT<br>GATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCC<br>AACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGA<br>AGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGC<br>CAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAA<br>ATAAAATACTTTATAGACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACA<br>ACTGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCAT<br>AATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGT<br>CAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATG<br>GAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGT<br>AAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAA<br>AGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGG<br>AATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACAC<br>CTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATC<br>AAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGA<br>AGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTAT<br>AGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAA<br>GCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTT<br>TTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATAT<br>CACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTC<br>GACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAA<br>CCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACATGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGA<br>AAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATGCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATA<br>TCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCA<br>TCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGA<br>TGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATC<br>TATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCC<br>TATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTT<br>TGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATC<br>AATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAA<br>AATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAATGGAAGAAC<br>ATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGA<br>CTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGG<br>AGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGA<br>ACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAAT<br>GGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAA<br>CGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCATGGGCAAGGACTTCATGTCCAAAACACCAAAAGCA<br>ATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAA<br>CATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCC<br>CATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATC<br>AGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTG<br>GAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAAT<br>ACCATTTGACCTAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTA<br>TTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCA<br>TAAAAAATTATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCAT<br>ATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAG<br>GGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGT<br>GCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AGAATAAAATCTAAATTTCTT</u></font>actggagcctacaagccatagtacta<br>atatggtggcaaagtttaacaactggttctctgggggaaaataaaaaagggctgaattgtagcatttaccaatttcaacagcatcagtactcccactatg<br>gctgatttcaggctgccaaatgcgaagtcgaccagctcccaaatttcctgaaatttaacagtcagttctcctgagccagtaggaagtggttccagcatgc<br>tcgtaggctacaaggtcctatatgatctgctctgcccaccgatttttttctttttttaaaaaaatattttttaagttgggtgcagtggctcacgcctgta<br>atcccagcattttgggaggccgaggtgggcagataacttgaggttgggagttt	UCSC	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Boissinot S, Chevret P, Furano AV. L1 (LINE-1) retrotransposon evolution and amplification in recent human history. Mol Biol Evol. 2000 Jun;17(6):915-28.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=10833198">PMID:10833198</a>.</LI></UL>	E:Library screening:TE-specific hybridization; E:Insertion-specific detection:PCR	NA	48/48	NA	NA	NA	intron:SLC25A43:NM:145305:3/5	
0	chr5	165780165	165781150	2000021	0	+	Database23; RIP_L1_chr5_165_01	ACAGACAAATGGATAGATGC	TGGAATACGTTCAGTCATAG	LINE	L1	L1HS	ggaggaaaatcagtgctttaatcaagatcaactcaaacataatatttattgttattgcatgtaagtgtgtgaaaaatgaactgggtgatagtgccatgtc<br>agaactattttcctcaacattaccgctaatcatctaaacttcattaggaaccaactccggtacaggtgggaaaacatttagttgtgttctgctctgctga<br>gcccattcaaaatagcttttctgcctcactccagcggtttcatgaagatggggattgatctgtgaatctcttgcatggtatgtttgaaatttttatatga<br>gtataaagtgtcaggtggtgtcaaatgctctaattaccaggcagcagagggagactcagttgacaaggagttaccatttttat<font color="green"><u>AAGATACGACTCTGCTT<br></u></font><font color="red">GAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCGCTCTGATGGTGAAC<br>TCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAA<br>CACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAA<br>AGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGT<br>GTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAA<br>GACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGT<br>GGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAA<br>ACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAGCAATGAGATCACATGGACACAGGAAGGGGAATATCACACTC<br>TGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCA<br>CATGTATACATATGTAACTAACCCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AAGATACGACTCTGCTT</u></font>t<br>gatttttatggacagcaggtcctgttctttattgcatggtgaagtcaaagaagctagtgtggagtccttgatttaaatattatgaatggtaaatgaaagc<br>aaactctagcacatgctgattctgctaaaagcactcagttcattgaaccttccttgatttctttcctttttcatattcttctctcaaccttcaggattcc<br>actttccttaataaaatgtaaaggaagcatctatccatttgtctgttcaatgggctacatcctcttctagccactaacaaagtcaatctgttctcctcca<br>gcacccaggtacacattccaaacagtattggtccatgagccaagagtgaaagaaatgcctcatgggaccatcgtgcatgagg	UCSC	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	48/48	NA	NA	NA	intergenic	
0	chr7	141266936	141272983	2000022	0	-	Database24; Druze55; 238448; AC073647; RIP_L1_chr7_141_01	ACTTGCTCATCTTTGAACTG	AGATCAGCTGAAACTCTAAG	LINE	L1	L1HS	gtgatagactggattaagaaaatgtggcacatatacaccatggaatactatgcagccacaaaaaaggatgagagttcatgtcctttgtagggacatggat<br>gaagctggaaaccatcattctgagcaagctatcgcaaagacagaaaaccaaacaccacatgttctcactcataggtgggaattgaataatgagagcactt<br>ggacaccaggcagggaacatcacacaccagggcctgtcgtggggtgtgaggagaggggagggacagcattaggagaaatacctaatataaatgataagtt<br>agtgggtgcagcacaccaacatggcacatgtatacatatgtaacaaacctgcacattgtgcacatgtaccctaggacttaaagtataatttta<font color="green"><u>AAAAAAA<br></u></font><font color="red">GAGAGGGAGGAGCCAAGATGCCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGG<br>TACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCT<br>GGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTT<br>TCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGT<br>CTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCACCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGG<br>GTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAG<br>ACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCC<br>CTGACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAG<br>GGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAAC<br>CACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAA<br>CAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAG<br>AAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCG<br>AGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAA<br>GGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAATTATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTG<br>AAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCA<br>GGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTA<br>AGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGAATAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGG<br>GGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAACCTTCATAAGTGAAGGAGAAATAAAATACTTTAT<br>AGACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCG<br>CTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAA<br>ATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGT<br>GTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAG<br>GCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTC<br>AACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAATGACCTACAAAGAGACTTAGACTC<br>CCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCT<br>CTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTG<br>ACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAG<br>GATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAG<br>ATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATTCCC<br>ACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCA<br>AGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAAC<br>AAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCA<br>CAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCT<br>CCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATCGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCA<br>GGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGACGGAATCC<br>TCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACAT<br>TGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAA<br>GGCTGGTTCAATATATGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCT<br>TTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCAC<br>AGCTCATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTG<br>TTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGA<br>TTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATC<br>ACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATC<br>CAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGGACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCT<br>CATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCAC<br>AGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACA<br>TTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCT<br>CAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGA<br>AAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCT<br>AAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAA<br>AAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAA<br>AATTTTCACAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAG<br>TGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGC<br>AAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGG<br>AACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCAATTCCTCAGGGATCTAGAACTAGAAATACCATTTGAC<br>CCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAG<br>CAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGA<br>TGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTC<br>ATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGAAGGGGGGAGGGATAGCATT<br>GGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTAC<br>CCTAAAACTTAGAGTCTGNTAAAAAAAAAAAAAAAAGAAAAG</font><font color="green"><u>AAAAAAA</u></font>tagtaaaataatattatctttttgcatacctggaaaaaaaaaaaggctcac<br>aaggctctacatggtctgcattccagttaccactctgactgccattgctttctcctctgcacactccatttcagcatctttgttatgccttccctaggat<br>ctctcacttattactcactatgcctggaatgttctttaacaagtttccgaatgtatcaccaccttacctctctcaatccttccctgaaaaccttatttga<br>aatttcaacactcctgcaagagatattccctttcattcctgtttcacttttcttcacaatacttcttcatgatctaatatactattttcaaaagctttat<br>tgaaatataaatcacattccataaagttgactcattgaaaat	UCSC	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Bennett EA, Coleman LE, Tsui C, Pittard WS, Devine SE. Natural genetic variation caused by transposable elements in humans. Genetics. 2004 Oct;168(2):933-51.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15514065">PMID:15514065</a>.</LI><LI>Brouha B, Schustak J, Badge RM, Lutz-Prigge S, Farley AH, Moran JV, Kazazian HHJr. Hot L1s account for the bulk of retrotransposition in the human population. Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5280-5. Epub 2003 Apr 7.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12682288">PMID:12682288</a>.</LI></UL>	C:Reference; E:Insertion-specific detection:PCR	NA	48/48	NA	NA	NA	intergenic	
0	chr18	12481263	12481264	2000023	0	+	Database25; RIP_L1_chr18_012_01;AC206473	TCTTCCACCATTCCATATTG;NA	TAGAAGTAACACTCTCACAG;NA	LINE	L1	L1HS	aaaatcaggaacaaggcaaggatgaccacttctatattcaacatagtactggtagttctagccagagcagttaggcaaaaaaagaaataaaaggcatcca<br>attggaaagaaagtaataaaagtgtccctgtttgcagatgacatgatcttacagatagaaaactccataaaaaattttttcaatacactaacaacaaaaa<br>gacaatcccattgacaacagcaccaaaaagaataaaatatctaggagtaaatttaataaggaggtaaaagacttatatacaaaaactatgagacagaaac<br>aaatggaagaataatattcatgaattgaaagacttactgttaacatgtgaatactacccaaagctatatacagatccaatagaatcccc<font color="green"><u>AAGAAAATCCT<br></u></font><font color="red">GGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTAC<br>CGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGG<br>AAGCGCAAGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAG<br>ACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGA<br>GATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGG<br>AGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTT<br>AAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGA<br>CTCCTGACCCCCGAGCAGCCTAAATGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTC<br>CTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACA<br>AAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAA<br>GCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGT<br>TGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAA<br>CTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGA<br>AGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAG<br>TGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAA<br>ATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGG<br>CAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCC<br>AATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGAC<br>AAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGC<br>AAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTC<br>ACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGC<br>TGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAG<br>GGGTTGCAATCCTAGTCTCTGACAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACA<br>AGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTCACCTACAAAGAGACTTAGACTCCCAC<br>ACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGC<br>ACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCA<br>CATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATT<br>AAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGT<br>TCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAA<br>GAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAA<br>ATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAACTCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAA<br>TTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGA<br>AATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCA<br>AGACTAAACCAGGAAGAAGTTGAATCTCTGAATCGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGAC<br>CAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCC<br>TAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGAT<br>GCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCT<br>GGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGA<br>CAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGATGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCC<br>AATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGG<br>AAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGT<br>TTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAA<br>GCATTCTTACACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATGCTTCAAAGAGAATAAAATACCTAGGAATCCAACT<br>TACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAATAAATGGAAGAACATTCCATGCTCATGG<br>GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAAT<br>TGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACC<br>TGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACAAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAA<br>ATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACT<br>GGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAAC<br>CATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGAC<br>AAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTT<br>TTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGC<br>GAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATC<br>AAAACCACTATGAGATATCATCTCACACCGGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACAC<br>TTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGC<br>CATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAG<br>ACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGT<br>TCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGG<br>TGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAA<br>ATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACAAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAA<br>AACTTAGAGTATAATAAAAAAAAAACACCATGGGAAAAAAAAAAAAAAACCATACCAAGCCAACATGGAAATGTTTGTTATTTTAATTGTTATGATGGTT<br>TCATGGCTGTTTGCATGTGTCAAAACTCTTCCAATTTGTGTACGTTTAATATGTGAACTTATTGTATGCTGGTTACACCCCCAAAAAACTGTTTAATTTA<br>AAAAAAAAAAAAAAA</font><font color="green"><u>AAGAAAATCCT</u></font>aatggtattttttacagaagtagaagataatcctaaaattcctatggaaccacaaaagacaatgaatagccaat<br>caatcttgagaaagaataacaaagccagagacatcacactttctgatcttacaatatattataaagttacaataacaaaaacagcatggtactggcaaac<br>aacagtggaacagaacaaagagtccagaaatgaacccacacatatacagtcaactgatcttttttttttctttctttctttccatggaatcttggttcac<br>ccaggctagagtggagtggtgcaatcacagctcactacagccttgatctcctgggctcaagtgatccactctgaagctttgtcaccagaaagtacattta<br>attatttcaacccat	Other;OTHER	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R,Wilson RK, Eichler EE. A human genome structural variation sequencing resource reveals insights intomutational mechanisms. Cell. 2010 Nov 24;143(5):837-47.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=21111241">PMID:21111241</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR;E: fosmid-end sequencing	NA;NA	48/48;NA	NA;NA	NA;NA	NA;NA	intron:SPIRE1:NM:020148:8/16;intron:SPIRE1:NM:020148:8/16	
0	chr3	83935819	83938039	2000024	0	-	Database27; 238697; RIP_L1_chr3_083_01;AC208155	GTAGAAGCTTCTTTAAAGCC;NA	AGATTGGCAGATGCATAGAA;NA	LINE	L1	L1HS	ttaataaatatttagcaagtgtttcctatttttatgacagtagggtttaattcatctatgaagatttctccagtctctttacccatcttgaacttaccaa<br>ttttcaatactaatataaattcctataatcagcaccatgccaagtacaaatgttctttttgtatgctctttgatctttataacgtgatcataaatgtatc<br>acatagaccacatgacagattggcagatgcatagaattattcaataataaacacatatagactacttaaaattaagtttaaactttatcaccaaagtata<br>gctttagtgattttattttgcatttaataagaactctggtaatgctacaactaaaaggaaagtatgttcaaaagcaaagggtatatt<font color="green"><u>AAAAGGCCATATA<br></u></font><font color="red">TTTTGTGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAAT<br>GGGCAAAACCTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGG<br>CAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCC<br>CATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACC<br>AACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGA<br>AGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAA<br>TATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACT<br>TTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTAT<br>ACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATAT<br>CTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGT<br>AGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAG<br>AAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATG<br>GGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAAGAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCA<br>TCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACA<br>GACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAG<br>ATATCATCTCACACCATTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACCCTGTTGG<br>TGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGG<br>GTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGTGGCACTATTCACAATAGCAAAGACTTGGAACCAACC<br>CAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTA<br>GGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAA<br>TGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATGGTATTGGGAGATATACCTAATGCT<br>AGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAA<br>TAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AAAAGGCCATATA</u></font>atctattttctaataagattttttgttttgaacaaaaatgtattctaccaggtgagttaatattta<br>caatattatccaacattatcacctctgacactatataaataagctcagaaaactatacattcttaataatagatctagtctttgcaaatttatgaataag<br>aggcttcacaagtttattttagtgttctaacttttttgtatatatcttctcctatcctgggggtgttgggggaagtaaataatgaaactactctacctca<br>taatataactattatttgaatctgttacctaatttaaacttgaacgaatttcatttacaatgatgagaattttatttgagcaataaggagaaaacacacc<br>tctcaatcaaactgagaataa	UCSC;UCSC	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Bennett EA, Coleman LE, Tsui C, Pittard WS, Devine SE. Natural genetic variation caused by transposable elements in humans. Genetics. 2004 Oct;168(2):933-51.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15514065">PMID:15514065</a>.</LI><LI>Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R,Wilson RK, Eichler EE. A human genome structural variation sequencing resource reveals insights intomutational mechanisms. Cell. 2010 Nov 24;143(5):837-47.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=21111241">PMID:21111241</a>.</LI></UL>	C:Reference; E:Insertion-specific detection:PCR;E: fosmid-end sequencing	NA;NA	48/48;NA	NA;NA	NA;NA	NA;NA	intergenic;intergenic	
0	chr9	91951708	91957755	2000025	0	+	Database28; RIP_L1_chr9_089_01	ATTTGCTTACTGTCCTAGTG	GTTACAGATAAGCCAAAGTG	LINE	L1	L1HS	caatgctaaccactcctaaaagaaaaccaaggtaattgttgtgtttgatatagtctttcacactttaaaacgtgtttatgtacaaaatatatgtctctag<br>aaagaagttgggaagaactgacatcttgacaatattgactctttctttccatgaacacagaatatctcttcattaatttagttattctgtggtttctttt<br>atcatctttttgtagtctttctcatatagatcttatacatattttttacagcttatacctaagaatttcattattaggggtgcaaatgtacatagtaata<br>tgtttttaatttcaaattttatgtatttattgctgatccatagaaaagtgtttgacttttgtatattaatcttgcaccttgctat<font color="green"><u>AATTGCTTCTTATTG<br></u></font><font color="red">AGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTACTGCATTTCCATCTGAGGTAC<br>CGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCACGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGG<br>AAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCAGGTCACTCCCACCCAAATATTGCGCTTTTCA<br>GACCGGCTTAAGAAACAGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACTGAATCTCGCTGATTGCTAGCACAGCAGTCTG<br>AGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTG<br>GAGCCCACCACAGCTCAAGGATGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTACAGACT<br>TAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTG<br>ACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGT<br>CCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCAC<br>AAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGTGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAA<br>AGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAG<br>TTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGA<br>ACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGG<br>AAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAA<br>GTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGA<br>AATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATGGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGG<br>GCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGC<br>CAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGA<br>CAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTG<br>CAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATT<br>CACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCACCAGTGTG<br>CTGTATTCAGGAAACCCATTTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCA<br>GGGGTTTCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAAC<br>AAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCA<br>CACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTG<br>CACCAAGCCGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACC<br>ACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGAT<br>TAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATG<br>TTCTTTGAAACCAATGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATTGCACTAAATGCCTACA<br>AGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGA<br>AATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAAGATCAACAAA<br>ATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAG<br>AAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCC<br>AAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGA<br>CCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCC<br>CTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGA<br>TGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGC<br>TGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTG<br>ACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAGTAAGAGCTATCTATGACAAACCCACAGC<br>CAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTG<br>GAAGTGTTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTG<br>TTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACA<br>AGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAA<br>CTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCAT<br>GGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGA<br>ATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTA<br>CCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAG<br>AAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAA<br>CTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAA<br>ACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAG<br>ACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAAT<br>TTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGG<br>GCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAA<br>TCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAAC<br>ACTTTTACACTGTTGGTGGGACTGTAAACTAGGTCAACCATTGTGGAAGTCAGTGTGGCGACTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCA<br>GCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAA<br>AGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGA<br>GTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATA<br>GGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGAGATAGCATTGGG<br>AGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCT<br>AAAACTTAGAGTATAATAAAAAAATAAAATAAAATAAAATAAAAAAAA</font><font color="green"><u>AATTGCTTCTTATTG</u></font>ccaggctttttgttgttgttgattcttccagattttc<br>tgcataaagattacatcatctgcaaacaaagagggttttctttctttcttttcaatcagtataccttttatcccctttcttgttttattgcattagctag<br>gacttttggtatgatattgagaagcagtggtgacaggggatatccttgccttgtttctgatcttagtgggaaagctttggttttctcagcatcgaaagca<br>tttttaattgcagaaataatgtatgaacctattctctttatcaaagtaaagttacagataagccaaagtgcctttttcccaaattatcaatgccaaccac<br>tcctaaaagaaaaccaaggtaattgttgtgttttatacattctttcat	UCSC	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	48/48	NA	NA	NA	intergenic	
0	chr6	24919871	24925929	2000026	0	-	AL512428; Database29; RIP_L1_chr6_024_01;AC213274	AAACATCCATGTCAGGAGTT;NA	GATGTATGGTGATTTCACTC;NA	LINE	L1	L1HS	gcatgatggcaggtgcctgtaatcccagctactcaggaggctgaggagggagaattgcttgaacccaggaagttgcagtgagccaagattgtgccattgt<br>actccagcctgggtggcagagccagactctgtctcaaaaaaaaagagagagagagagaaaaggaaagtatatcttattttaaaagggagatgagatgtat<br>ggtgatttcactcatttttattgtgaacaacaaaaagcaaggacaaataagatttgaaaagaagtactaaattcagtatgccactgaattcccagatcct<br>tccccgcaagctctctttattaagcagagaaccagttttgattgtcataaggaggtgtcgtgagcagggagagagctagaatgt<font color="green"><u>AAACAAGTACTAAACG<br></u></font><font color="red">GAACAATAATACCACCGAGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGC<br>ATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGTGCGAGCCGAAGCAGGGCGAG<br>GCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCC<br>GAATATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATT<br>GCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGG<br>GAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGC<br>AGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCT<br>CCTCAAGTGGGTCCCTGACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACA<br>GACCTGCAGCTGAGAGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCA<br>AAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCT<br>CACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCA<br>AACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTG<br>AAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATG<br>AAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCT<br>GATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCC<br>AACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGA<br>AGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGC<br>CAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAA<br>ATAAAATACTTTATAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACA<br>ACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCAT<br>AATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAACGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGT<br>CAAGACCCATCAGTGTCCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATG<br>GAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGT<br>AAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAA<br>AGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGG<br>AATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACAC<br>CTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATC<br>AAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGA<br>AGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTAT<br>AGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAA<br>GCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTT<br>TTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATAT<br>CACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTC<br>GACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAA<br>CCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGA<br>AAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATA<br>TCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATTCAGCAGCACATCAAAAAGCTTGTCCACCATGATCAAGTGGGCTTCA<br>TCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGA<br>TGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATC<br>TATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCC<br>TATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTT<br>TGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATC<br>AATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAA<br>AATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGATACAAACAAATGGAA<br>GAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCA<br>ATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAG<br>CTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAA<br>CAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTCGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAAT<br>AAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTCAAACTGGATGCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATT<br>TAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAA<br>AGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCT<br>ACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACA<br>ACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGC<br>CATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAGGTGCTGGAGAGGATGC<br>GGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCATCCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAA<br>TACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACT<br>ATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCC<br>ATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAAATGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCA<br>TATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGA<br>GGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGATGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATG<br>TGCACATGTACCCTAAAACTTAGAGTATAATTAAAAAAAAAAAAAAGAAAAAAAAAAAA</font><font color="green"><u>AAAAAAGTACTAAACG</u></font>aatgggaactcctgacatggatgtt<br>tccctttcaatggcaagatgtaatgtttgacctactttcatcacaaaaaaataagacaaatcagtcttgagaaaagaatgagagaaggccaggtgcagtg<br>gctcatgcctgtaatcccagcactttggaaggctgaggcaggcgtatcacttgaggtcaggagatcgagaccagcctggtcaacatgatgaaaccccgtc<br>tctactaaaaatacaaaaaaaattagccaggcatggtggcacacacctgtaatcccagctactggggaggctgaggcaggagaatcgcttgaatccagga<br>gacagaggtttcagtgagccaagattgcaccactgcactccaacctgggcgacagagac	UCSC;UCSC	<UL><LI>Brouha B, Schustak J, Badge RM, Lutz-Prigge S, Farley AH, Moran JV, Kazazian HHJr. Hot L1s account for the bulk of retrotransposition in the human population. Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5280-5. Epub 2003 Apr 7.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12682288">PMID:12682288</a>.</LI><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R,Wilson RK, Eichler EE. A human genome structural variation sequencing resource reveals insights intomutational mechanisms. Cell. 2010 Nov 24;143(5):837-47.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=21111241">PMID:21111241</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR;E: fosmid-end sequencing	NA;NA	48/48;NA	NA;NA	NA;NA	NA;NA	intron:FAM65B:NM:014722:21/23;intron:FAM65B:NM:014722:21/23	
0	chr9	103483801	103484548	2000027	0	-	L1HS486; Database30; RIP_L1_chr9_101_01	TTCTGCCATTCAGTTGACAT	CATAAGTCACATCTGCATAC	LINE	L1	L1HS	cacgcctggctaattttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctcatgatccgcccgcctcggc<br>ctcccgaagtgctgggattacaggcgtgagccaccacgcccagctacaagttgtttttttaaatgttagttaattggagcaattattggtggaatattat<br>tttgagaatacctttataagcgcatttgaatggatgtttttgcctagccaatgaccatgtgttgaactatggtcgggtagacaaaatgaagacttgaatt<br>ctgacatttaggagctgacagtctagtgaatgaggtcgaaatgtaagtaaatggttataaaacaatgggatgtgtgatttat<font color="green"><u>AAGAATAGGGATATATTC<br></u></font><font color="red">CAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGC<br>GGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAA<br>TACCACTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACT<br>ATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCC<br>ATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACTGCA<br>TATTCTCACTCATAGGTGGGAATTGCACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGA<br>GGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATG<br>TGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAA</font><font color="green"><u>AAGAATAGGGATATATTC</u></font>agatatacagagggaaataatgaactcttctcag<br>atatttggtgatgagggaaaaacactggacttggatcctgtaaatgaaaaggggttttaggtttggaacaaattcacagacaaaggaaatgacatatgca<br>aattcaccaagacctgaaagataaatttagtatggctggagcattaattgcatatgaaaaggatttgagatgattctggaaaagtagtcaacttgataac<br>ataccacacagagtttgtatgccaagctaaggcatttgcattttatatgcagagcggatgtcaactgaatggcagaacattagccctgacatatttataa<br>aaatcataatcctgtaacaaattaaccaaataaagtaatacagtataa	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	60	905	139	NA	intron:GRIN3A:NM:133445:2/9	
0	chr7	49690395	49696443	2000028	0	-	AC009645; Database31; RIP_L1_chr7_049_01;AC207178	GAATCTCCATAGTCCATTAC;NA	ATCACAGATGCTTGTTACTG;NA	LINE	L1	L1HS	tggccgtgtgcggtggctcttgcctgtaatcccagcatttgggaggccgaggagggtggatcgcttgaggtcaggagttcaagaccagcctgacagggtg<br>aaaacctgtctctactaaaaatacaaaaaattagctgggcatggtggcaggtgcctataatcccagctacttgggaggctgaggcagtagaattacttga<br>acctggtaggtggaggttgcagtgagccgagatcatgccactgcactccagcctgggtgacagagtgagactctgtctgaaaaaatcatgctgctataaa<br>gacacatgcacacgtatgtttattgcagcactcttcacaatagcaaagacttggaaccaacccaaatgtccaacaatgatagactggatt<font color="green"><u>AAGAAAATGG<br></u></font><font color="red">AGGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTA<br>CCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGG<br>GAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTC<br>AGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCT<br>GAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGT<br>GGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGAC<br>TTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCT<br>GACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGG<br>TCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCA<br>CAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACA<br>AAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAA<br>GTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAG<br>AACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGG<br>GAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAA<br>AGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGG<br>AAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAG<br>GGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGG<br>CCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAG<br>ACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCT<br>GCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAAT<br>TCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGT<br>GCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGC<br>AGGGGTTGCAATCCTAGTCTCGGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAA<br>CAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCC<br>ACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCT<br>GCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGAC<br>CACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGA<br>TTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGAT<br>GTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCACTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTAC<br>AAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAG<br>AAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAA<br>AATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACA<br>GAAATACAAACTACCATCAGAGAATACTACAAACACCTCTATGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCC<br>CAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATCGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGG<br>ACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTC<br>CCTAACTCATTTTATGAGGCCAGCATCATACTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTG<br>ATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGG<br>CTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTT<br>GACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAG<br>CCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTT<br>GGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATT<br>GTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCAC<br>AAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCA<br>ACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCA<br>TGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAG<br>AATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCTGCATTGCTAAGTCAACTCTAAGCCAAAAGAACAAAGCTGGAGGCATCACGCT<br>ACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCA<br>GAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAA<br>ACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAA<br>AACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAA<br>GACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAA<br>TTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTG<br>GGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAA<br>ATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAA<br>CACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCC<br>AGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCA<br>AATACTTGGAACCAACCCAAATGCCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATG<br>AGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCAT<br>AGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGG<br>GAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGTGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCC<br>TAAAACTTAAAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AAGAAAATGG</u></font>catatatatgccatggaatactatgcagccataaaaaatga<br>tgagttcatgtcctttgtagggacatggatgaaattggaaatcatcattctcagtaaactatcgcaaggacaaaaaaaccaaacactgcatgttctcact<br>cataggtgggaattgaacaatgagaacacatggacacaggaaggggaacatcacactctaggaactgttgtggggtggggggaggggggagggatagcat<br>taggagatatacctaatgctaaatgatgagttaatgggtgcagcacaccagcatggcacatgtatgcatatgtaactaacctgcacattttgcacatgta<br>ccctaaaacttaaagtataattaaaaaaaaaaaaacttgaggcacttac	UCSC;UCSC	<UL><LI>Brouha B, Schustak J, Badge RM, Lutz-Prigge S, Farley AH, Moran JV, Kazazian HHJr. Hot L1s account for the bulk of retrotransposition in the human population. Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5280-5. Epub 2003 Apr 7.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12682288">PMID:12682288</a>.</LI><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R,Wilson RK, Eichler EE. A human genome structural variation sequencing resource reveals insights intomutational mechanisms. Cell. 2010 Nov 24;143(5):837-47.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=21111241">PMID:21111241</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR;E: fosmid-end sequencing	NA;NA	48/48;NA	NA;NA	NA;NA	NA;NA	intergenic;intergenic	
0	chr4	108347278	108351163	2000029	0	-	L1HS430; Database32; RIP_L1_chr4_108_01;AC206894	AGCTGTGTTGATCACAATTG;NA	ATTTGCATGTTGTGCTCACT;NA	LINE	L1	L1HS	gaatttagaaaacaaaaccgaaagcagctcagtagctgtcagtgaagagcttcatgtgtccaggcattcagggaccccagagatagcatttgcatgttgt<br>gctcactgcaaacttgggcagtcataatcttggaggcattgttgtcctcattttataagcaacagtaaaacattacctttatagtagactggattgttaa<br>atccaggaagattcatgccctgttaatcttgtcccctgctaccatgactccaagtatttttaattccacaaagcctttctgcagttttcatcaccttctt<br>gttttccctgactgcttccttattctggtattttgctgagtcatgataaggtatcagagaaccaacatgtaggaacaagt<font color="green"><u>AAAGAGAATCCTAATGTTTT<br></u></font><font color="red">GGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCAAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACC<br>AACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACA<br>GGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACAT<br>TAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCC<br>CAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGA<br>ACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCACTCAACTACATGGAAACTGA<br>ACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAA<br>TCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCA<br>CAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACAC<br>AAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGA<br>GAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTAC<br>GCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAA<br>TAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACATGGA<br>GGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAG<br>CCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGC<br>AGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATAT<br>AAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAAATCAACAACCCTTCATGCTAAAAACTCTCAATAAA<br>TTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTT<br>TGAAAACCGGCGCAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAA<br>GGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTATATCTAGAAAACCCCATCATCTCAGCCCAAAATCTCCTT<br>AAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAA<br>TCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAA<br>ACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCC<br>AAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAA<br>GAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAAC<br>AGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAA<br>CCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCC<br>TTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCA<br>GGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTC<br>TGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAA<br>TCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTA<br>TGCATCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCTCACACCAGTTAGAATGGCA<br>ATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGT<br>GGAAGTCAGTGTGGCAATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATG<br>CTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATT<br>AAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCA<br>TTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAA<br>TATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCAC<br>CAGCATGGCACATGTATACATATGTAACTAACCTGCACAAGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAA</font><font color="green"><u>AAAGAGAATCCTAA<br>TGTTTT</u></font>aatattttggaggaggatatgatccatatgattacattttgtttgggttgggtttctcagacctcctttgacctgtaaccaaaaaattcttcag<br>cagtatttacaattctgcccgtctgcacccaaatggtttgtgtgtgtgtgtgtgtgtgtgtgcatacacacacacgcctgcacgcacacacgtgcacatg<br>catgagtatgtgcttccttcttgtactgtataataggtctgtagcatacaagctgttaagtcattttatggaagttctgtggaaatgctaatgtatacta<br>gcaattgtgatcaacacagctgttaatcatcaatgtttctgtatctccaaaaaagccaacaaacctgagaactgtcgctgatttta	UCSC;UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R,Wilson RK, Eichler EE. A human genome structural variation sequencing resource reveals insights intomutational mechanisms. Cell. 2010 Nov 24;143(5):837-47.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=21111241">PMID:21111241</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR;E: fosmid-end sequencing	NA;NA	60;NA	4034;NA	127;NA	NA;NA	intergenic;intergenic	
0	chr1	30813270	30814224	2000030	0	+	Database33; RIP_L1_chr1_030_01	CAAACAGGATCTAACATAGG	TGAGAATGTACACAGAATGC	LINE	L1	L1HS	gagtaaaaattgtcacttcctgacagggccaaaaaccttaagactgtaagtaaaatccaaaatctgcctttgtttggcttcataacctcaagaggttttt<br>aaacctgaggttcctatgtgatcaatgtagagagaaaaagtgatgtttctaatgcaaaactataatacaccatgaggagtttccatgtaaccagggttat<br>aagattgtatccctgtgcattgtttttaagtcttgttatctaccagtagactagaataaatcctgaattcatctagatttatctgtgctttcttccatga<br>actactgaaaatggaaactgctctgttcctgaatctctataagctgaaactaaataaattttaaaaaacaagcctcatcaacctacaacatgggag<font color="green"><u>AAAA<br></u></font><font color="red">TTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTG<br>GGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGTTCATCATCACTGGCCATCAGAGAAATGCAA<br>ATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAA<br>CACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCATCCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCC<br>AGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCA<br>AAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATG<br>AGTTCATATCCTTTGTAGGGACATGGATGAAAATGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCAT<br>AGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGACAGCATTGG<br>GAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCC<br>TAAAACTTAGAGTATAATAAAAAAAAATAATAAATCAATAAAAAAATAAATAAAT</font><font color="green"><u>AAAT</u></font>aaataaataaataaataaaaaaaacaagcctcatgcctgat<br>atatgggtcacatgaaaagttcacctaatcacccaaggttatgaccagagacattcaaatcacaaactaggatgagaagttgacattttcacactgtaga<br>cagcttttcccaagatgttggaacaagactccatatcataatgagattattaccccttttaacactacctttcccacttggcaggatagtggtataattg<br>cagtttcacagtcagtagcttctgctggtcactcgacagaacctgacctaagagatcctttagtgtctattggttaaataagaaaatgtctgtgatgttg<br>ctaatactacctgctgttcctatgtaaattcctctgggaaagttgagacctatat	UCSC	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	48/48	NA	NA	NA	intergenic	
0	chr4	182113797	182115282	2000031	0	-	Database34; 237877; RIP_L1_chr4_182_01	ATTAGACGCTAGTAAACCTG	CTACATTGAGCATGAAATGG	LINE	L1	L1HS	ttatactatcaggtttgaccaatagaaaaatgtaagtaggtaatatttaaactacattgagcatgaaatggttcttagtattgagatgagaaaaatcaga<br>aaagatgaagaatgagatgaaaatatttccatagaaaagttttattagatacaaaacttgaaactagccacatttttgtacttataggggtttctataaa<br>ccactggtcataaaacatgcaaaaatattttccccaaacattaaatttggctccattattgagtgcctggtgtgttgcagatgcggtagtgagtgcaccc<br>tgcaatcctatgcaataggaatcacatctcctttcacaactgggtaacatgcaagccaagcaactagctcatgtctacgtagct<font color="green"><u>AGAAAGTGCTGTAGAG<br></u></font><font color="red">TTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGG<br>TTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCC<br>CAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGG<br>GCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGT<br>GATGCCTCCAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACA<br>TGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCA<br>TCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAG<br>AGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGA<br>GAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATAC<br>CATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATT<br>CACAATAGCAAAGACTTGGAACCAACCCAAATGCCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATA<br>AAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATAT<br>TCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGG<br>ATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGTGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGC<br>ACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAGAATTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AGAAAGTGCTGTAG<br>AG</u></font>aacgttgaaattcaaatctgaccagcttccaatcaatcctcccaacgtgctatgatgaaaagtatacaagttaccagaaaagaggttttggattctca<br>gccttgagtgatgcttaaataggtgaacaaccatcgtctgtcctgtttgaaattaggtctttctgataagagcataggaaacagctaatttcctgagacc<br>ttttccaggtttactagcgtctaatttttcctgcaacagttagttttagtgatttattataacctccaagataatgcaaaatgaattcttttttctttct<br>agataaatgtgctcaggatatttaaactggcaacaaaagttatcaaaattatgctatgaaaaagtaattttatttgtagttatgaa	UCSC	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Bennett EA, Coleman LE, Tsui C, Pittard WS, Devine SE. Natural genetic variation caused by transposable elements in humans. Genetics. 2004 Oct;168(2):933-51.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15514065">PMID:15514065</a>.</LI></UL>	C:Reference; E:Insertion-specific detection:PCR	NA	48/48	NA	NA	NA	intergenic	
0	chr3	138555022	138556117	2000032	0	+	Database35; L1HS301; L1HS372; RIP_L1_chr3_138_01	GGTAGAATGCTCATACATGT	GCATGTGGTAATTTCTACTG	LINE	L1	L1HS	ttgaataaaaacactcagaagctattttaaaatgcagaaaagaagagaaagaggaaatagcacaggtatggtaaatttgacccaaacatatcagtaacta<br>cattcaaatcaaaaagactaaatgcttgaggacaggagtttgagaccagcctgggcaagagagagaccccatttctaaaaagaaaaagaaaaagaaaaat<br>aattagcctgttgtggtggcatgcttgtagtcccacctacttgggaggctgaggcaggaggattgcttaagcaccggactttgaggctgcagtgagctgt<br>gatgcaccactgtactccagtctgggtgacagagagatacatcattataaataaataaataaataaaataaaagttctttagagtg<font color="green"><u>AATAAAAAATAAAA<br></u></font><font color="red">CTCATCTACACTGTTATGAAAGACACATGTAAAACGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGG<br>ATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATC<br>TGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGA<br>CACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGAT<br>ATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTG<br>GGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGT<br>ATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCA<br>AATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGG<br>GACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATG<br>AGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAG<br>ATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTAT</font><font color="green"><u>AATA<br>AAAAAAAAAA</u></font>aaaaaaaaacacaaggataaataagttgaaggtaagaagaaagaaaacatcagaataaagctgatataataaaatgtttaactcataatg<br>aatatataataattttaaattttatgcacttaataatatagaagcaaaatataatgcacaaattttataggtttatgagaactggatacatccatgatca<br>aaatgagtaattatgacatatctatgaataattcattttaataaacaggccaaaaaaatcagcaaagttatagggaatcaaaaacatgtatgagcattct<br>acccaccatctatgggatagatattcttttttaaaattttattctccctggctcttcatttttattttttctaaagtttttatttttgatttttat	UCSC	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	48/48	NA	NA	NA	intergenic	
0	chr8	129534351	129540448	2000033	0	-	239178; Database36; RIP_L1_chr8_129_01;AC225986	TCGCTTTCTCAAATGGAAGT;NA	AGTTACCTCTCATTTGTCTG;NA	LINE	L1	L1HS	cttccccttacttcacagccacgtagcacttatggctgtaagagccagcacttggccaagtgcaaatgcatgaccttattaatttatgcatgtgaaactt<br>ttcttagggagggagaagtattccattaaatgatatctatctccccaattccattaattagttaataaaaaagttaaagagaatttcatggggatacact<br>ggcttctgtgatagaatatcagctaagtgagatattaataaaaagacaacatgtgtctatatcagactcctcagtaaggtgactgaggctaaaactgaca<br>atgtaagttacctctcatttgtctgatgtgtggattcactgttctttttatctgggttagtttttgctgtgatgaaataaggttt<font color="green"><u>AAAAACACAAGCTGG<br></u></font><font color="red">GAGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTA<br>CCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGG<br>GAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTC<br>AGACCGGCTTAAGAAACGGCGCACCATGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCT<br>GAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGT<br>GGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGAC<br>TTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGGAGGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCT<br>GACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGG<br>TCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCA<br>CAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACA<br>AAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAA<br>GTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAG<br>AACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGG<br>GAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAA<br>AGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGG<br>AAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAG<br>GGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGG<br>CCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAG<br>ACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACTGGTACCAGCCGCT<br>GCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAAT<br>TCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGT<br>GCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGC<br>AGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAA<br>CAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCC<br>ACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCT<br>GCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGAC<br>CACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGA<br>TTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGAT<br>GTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTAC<br>AAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAG<br>AAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAA<br>AATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAGAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACA<br>GAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCC<br>CAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGG<br>ACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACATGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTC<br>CCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTG<br>ATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGG<br>CTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTT<br>GACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAG<br>CCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTT<br>GGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGATGACATGATT<br>GTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCAC<br>AAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAGATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCA<br>ACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCA<br>TGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAG<br>AATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACT<br>ACCTGACTTCAAACTATACTACAAGGCTACAGTAACCCAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCA<br>GAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAA<br>ACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAA<br>AACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAA<br>GACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTCAACAGGCAACCTACAACATGGGAGAAAA<br>TTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTG<br>GGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAA<br>ATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAA<br>CACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCC<br>AGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCA<br>AAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATG<br>AGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCAT<br>AGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGG<br>GAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCC<br>TAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAGACTGAATAATAAAAAAAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AA<br>AAACACAAGCTGG</u></font>atagctagaaagaaggaattcattgtgaagcaggtgctatacattgcctcatgtagtagtctcaaccagaggctaagtattgtgtaa<br>gcctgtttgctatacaggatactaatgctcagagaaggtgatatgttttcctggggtcacacaggtaacaagtatccaagctggactttaatcctagttg<br>atctgacctaaaagtctattctcttctcactgcaccatattttatgaggacatgctgtaagtcaagacaggatgtgaacagagaattgacaattgaaggg<br>agacagagaagatcaggaaagttcctttcacattaaataagttcatggaatgaatgggggagaacatggaggaggtgggctaaattcctgcaattaga	UCSC;UCSC	<UL><LI>Bennett EA, Coleman LE, Tsui C, Pittard WS, Devine SE. Natural genetic variation caused by transposable elements in humans. Genetics. 2004 Oct;168(2):933-51.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15514065">PMID:15514065</a>.</LI><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R,Wilson RK, Eichler EE. A human genome structural variation sequencing resource reveals insights intomutational mechanisms. Cell. 2010 Nov 24;143(5):837-47.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=21111241">PMID:21111241</a>.</LI></UL>	C:Reference; E:Insertion-specific detection:PCR;E: fosmid-end sequencing	NA;NA	48/48;NA	NA;NA	NA;NA	NA;NA	intergenic;intergenic	
0	chr6	129361224	129367267	2000034	0	+	Database38; RIP_L1_chr6_129_01;AC217520	CCCAACTGATTTAAGTCAAC;NA	CGAACCAGAAAGTAAGTCAT;NA	LINE	L1	L1HS	atggataggagaaaggaccctgagttattataacagagtccaagagtcagagagctgcacagatggggtgggatatgccaggtcaaggaaagggccatgg<br>gagtgggtgcctgatgcggagaggaggaaaagaggtcagcgaggaggtaaagagcctgggcacagtcatgttggtagattttacagttacataaggagag<br>gtaggaaggaagatggcgaaccagaaagtaagtcattaataatggctggaaggtggttttatgagggatgtggattttcagagagaaagagaaaactgat<br>taagaagtagcatcaaagaggagcaaagttgatgcacaacctatctctagatcttgaaggtcttatagaatattgtttctaagtc<font color="green"><u>AGAAGTATGATGACA<br></u></font><font color="red">GGGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGCTCTACAGCTCCCAGTGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTA<br>CCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGG<br>GAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTC<br>AGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCT<br>GAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGT<br>GGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGAC<br>TTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGTACGCAGCTGGAGATCTGAGAATGGGCAGACTGCCTCCTCAAGTGGGTCCCT<br>GACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGG<br>TCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCA<br>CAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACA<br>AAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAA<br>GTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAG<br>AACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGG<br>GAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAA<br>AGTGATGTGGAGAATGAAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGG<br>AAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAG<br>GGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGG<br>CCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAG<br>ACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCT<br>GCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATCATGACAGGATCAAAT<br>TCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAAACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGT<br>GCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGC<br>AGGGGTTGCAATCCTAGTCTCTGACAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAA<br>CAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCC<br>ACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCT<br>GCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGAC<br>CACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGA<br>TTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGAT<br>GTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTAC<br>AAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAG<br>AAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAA<br>AATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACA<br>GAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCC<br>CAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATCGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGG<br>ACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTC<br>CCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTG<br>ATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGG<br>CTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTT<br>GACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGATGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAG<br>CCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTT<br>GGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATT<br>GTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCAC<br>AAACATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCA<br>ACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAATAAATGGAAGAACATTCCATGCTCA<br>TGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAG<br>AATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCTGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACT<br>ACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACAAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCA<br>GAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAA<br>ACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAA<br>AACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAA<br>GACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAA<br>TTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTG<br>GGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAA<br>ATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAA<br>CACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCC<br>AGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCA<br>AAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATG<br>AGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCAT<br>AGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGG<br>GAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCC<br>TAAAACTTAGAGTATAATAATAAAAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AGAAGTATGATGACA</u></font>aatggtcattttccttaaaataaaatcatatatcactactt<br>actgacttgcacctatatgtacttctgggaaatttagccagcatgtatttccacaatacagggatagtttttgttctgtggactgctaaatgatcacagc<br>ctaatgtattgccttctcagtaaacacacgttgacttaaatcagttgggtaaattgtaaactcaattccttactttgactttagtttgcaaattaagaat<br>agtgtacttttcttattttcaggccttatttataattcctaatgctatacactattatgttacagcttgcacttgtattttgacactttctaattattgt<br>caaattataaatactactaattaatatatccttgattcttcata	UCSC;UCSC	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R,Wilson RK, Eichler EE. A human genome structural variation sequencing resource reveals insights intomutational mechanisms. Cell. 2010 Nov 24;143(5):837-47.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=21111241">PMID:21111241</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR;E: fosmid-end sequencing	NA;NA	48/48;NA	NA;NA	NA;NA	NA;NA	intron:LAMA2:NM:001079823:1/64;intron:LAMA2:NM:001079823:1/64	
0	chr13	29113838	29119844	2000035	0	-	L1HS235; Database39; RIP_L1_chr13_029_01	ACAGGATCTTAAGGTTGAAG	CATTGTGTGCCATGAAAATG	LINE	L1	L1HS	tcaaaatggtattgtaggttctacccaaagtagtcaagaaaaagaaataaaagatatccagtggaaaaagacaaagtaatatctttatttgcagacgata<br>tgatcttatacatagaaagtgctaagacacacacacacacacacacactattagaactaataaattagttcaaagatacaagatgttattacatgatttt<br>tcatggatagtgtatataaatgcaatgaaactagagataatctaatagacatatatatatctagatatattttatatatatattaaacattgtgtgccat<br>gaaaatgaaacacagcataccaaaacttacggaatgcaacaaaagtggtggtcagaaagaaatttgtagctgtaaaaacctacatt<font color="green"><u>AAAAAGTAGTTCTC<br></u></font><font color="red">GAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGAC<br>AGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTC<br>CGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAG<br>ACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCT<br>GGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCC<br>TGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGA<br>GAGCAGTGGTTCTCCCAGGACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACTCCTGACCCCCGAGCAGCCTAACTGGG<br>AGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACC<br>AGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAA<br>CTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCT<br>GAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAA<br>TGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGA<br>GCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAA<br>TGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAA<br>AACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCT<br>CGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCT<br>CAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAAT<br>TTTCAACCCAGAATTTCATATCCAGCCAAATTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGCAAATGTTGAGAGATTTTGTCACCA<br>CCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATC<br>GAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATA<br>AATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCA<br>GAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGACAAAAC<br>AGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTAT<br>GCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCC<br>CACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAG<br>AACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGC<br>AAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTA<br>CATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACAC<br>CACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGAC<br>ACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGG<br>AAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAA<br>GAAAAAGAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTAC<br>AAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTC<br>TGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCA<br>GAGGTACATGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATT<br>CTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAA<br>ACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGT<br>AATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAA<br>ACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGG<br>AAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGA<br>GAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCC<br>CAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAA<br>CAGAGAGCCAGATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAGCTTACAAGGGATGTGAAGGACCTCTTCAA<br>GGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATG<br>GCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATAT<br>GGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTAC<br>AGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTG<br>ATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAAC<br>TGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGG<br>CATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAA<br>CTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGC<br>TAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGTGAAGGACATGAACAGACACTTCTCAAA<br>AGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACA<br>CCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAAC<br>TAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAA<br>TGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACA<br>ATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGA<br>AATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGG<br>ACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTA<br>GTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAA<br>AAAAAAA</font><font color="green"><u>AAAAAGTAGTTCTC</u></font>aaatcaatatccaaaccttcaaccttaagatcctgtatctatttagatatattttatatacattagataaaatctaata<br>aatgatatataatctaacacatactatatattagataaaatctaatcattctagtggaactattagaacattagttctaaatacagattattttagattt<br>tttagggatataatttttttatattatttctgaataatgataattctctttctttctataatttgtttctttttcttcacattatgtactgactagaata<br>tccagtaaaatgtttaatagaaatagttaatgatgagcatcctggtctgatccctgataccagaacaaaagctttcaacacttgcccaataagtatgata<br>ttggctg	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	59	6441	420	NA	intergenic	
0	chr5	24406300	24409193	2000036	0	-	238869; Database40; RIP_L1_chr5_024_01	TATATCTTCTACGAAGGAGC	ATCTTTGAGAATGCTGATGC	LINE	L1	L1HS	catgtcatgtttgttaccaaagtaatatagatacctttaaagactgatctcatcagtctataaatgtatttgtttctagtgtatttaaaataattgcctc<br>aatctattttctcatatttttctaaataattctcttctcttttttatgatctcaagtttgttaaagttataccaatggtatttttttctatttttaaatt<br>aaaaacaaatgtgtaatttcttgaatagtccatctgtatctttgagaatgctgatgcatattaactttgtattgttgcacaacagataatcagttatttg<br>tagtgtgcatgatgctatattatatgatttatgtcataaaaatgttgcattacttgcttgaaattgaatacacttatgttataat<font color="green"><u>AAAAATTTTGTTTTA<br></u></font><font color="red">GAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCT<br>TTGTCAGATGAGTAGGTTGCAAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAA<br>TTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAG<br>GTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTC<br>AGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGAT<br>AGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTTGTACCAGTACCATGCTGTTTTGGTTACTGTAGC<br>CTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCGATGCGGGCTCTTTTTTGGTTCCATATG<br>AACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTT<br>TCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTATTTGTCTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAA<br>GAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGT<br>CTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTG<br>AGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTG<br>CCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCGGTTTTCAAAGGGAATGCTTCCAGT<br>TTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACATCCCATCAATACCTAATTTATTGAGAGTTTTTA<br>GCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATT<br>TATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCC<br>AGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGA<br>TGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTA<br>GAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCA<br>CTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCGGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGA<br>GAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGA<br>ACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATT<br>GCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACT<br>ATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAA<br>ACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGG<br>AGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACAAGCATGGCACATGTATACATATGTAACTAACCT<br>GCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAACACATGAAAAAAAAAAAAAAACAAAACAAAACAAAGCAAACATGGAAATG<br>TTTGTTATTTTAATTGTTATGATGGTTTCATGGCTGTTTGCATGTGTCAAAACTCATCAAATTTGTGTACGTTAAATATGTGAAACTTATTGTATGCTGG<br>TTACACCTCAATAAAGCTGTTAAATTTTTTTAAATTTAAAAATATTATTTCAAGAATAAAATAACCAAACCATAAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AAAAAT<br>TTTGTTTTA</u></font>aaaaagtaattaaaaattggaatgattatttattttggggatatagatatgaagaaaaatattttcaaaccattaaacaatttttaatatt<br>tagtagacaccatttaatataatagcaaaactgagttttttaatgatgtcctcggttcattgtattaaaagagtttctcattggaaaaaatatgggaagc<br>attatatgaatgtaaatttgagcatataaaattgatagatccattataagattaatatccaaataataaaaatattcaaacattcaaataataaaaatat<br>cccatccaaacttaccaaacattaaaaataatacaaatattaaatatatatttaaaaagaaaatattcgaatttcattattgaggcagaaaagt	UCSC	<UL><LI>Bennett EA, Coleman LE, Tsui C, Pittard WS, Devine SE. Natural genetic variation caused by transposable elements in humans. Genetics. 2004 Oct;168(2):933-51.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15514065">PMID:15514065</a>.</LI><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	C:Reference; E:Insertion-specific detection:PCR	NA	48/48	NA	NA	NA	intergenic	
0	chr3	59827944	59827945	2000037	0	+	Database41; RIP_L1_chr3_059_01	AAAGCTGAAGCTAATGGAAC	ATTAACAGGGATTGCATCAC	LINE	L1	L1HS	ttctggccaactgacttagcaaagagcagcacaatatccttgggctgagaccagcgggtttgccactgtctctcaccggcaatcgcattcttgcttccaa<br>atccggctgataatttaggaaggttttatgtcaccgctgctcggcttctttttgtgctttgattacctattctcatacaacacttaaaggtggtcacaga<br>ataatctctaatgttttgctttctatgataaataaggggttcgtgaagttcattaacagggattgcatcaccctccaccctcttttacaaccacaccata<br>aaagtagcctctaattagttaaaagactacaaattataccatcaacgtgaggtatggcaaaatctgatggctctaattatcttaat<font color="green"><u>AATCAGCAGAACCA<br></u></font><font color="red">AGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAA<br>AAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAA<br>ATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAA<br>TAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGTGATTCCTCAGGGATCTAGAACTAGAAATACCATT<br>TGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACA<br>ATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAA<br>ATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTC<br>ACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAG<br>CATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACAT<br>GTACCCTAAAACTTAGAGTATAAAAAAAAAAAAAAAAA</font><font color="green"><u>AATCAGCAGAACCA</u></font>ctctcaacctaataagagaatgagtcattagtggtagtttatgaagat<br>caccgacattctctttgttatggagtttgtccttcctgtgttaaaatttggacacactttctacttgaatctaaaaaggatgatttctaagaagttactg<br>aagcaatgcaagatcaaaacataataaccacattcattcttaatcagcattacagtgaaagtaatttaccacagaacacataattaagtcataaatgaaa<br>tctcaagacagaaattgctccccttttaagatttctcattgtccatacactcagaaatgagaagagggattttctcattctgatcctaaatctatcactg<br>aaatgatgacttcacttgcatttatgcattttgcttta	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	48/48	NA	NA	NA	intron:FHIT:NM:002012:8/10	
0	chr2	88810362	88813397	2000038	0	+	15600; Database42; L1HS360; RIP_L1_chr2_088_01	TATGGAAAGTGGCAACCTTT	GGAAGATGTCAGTTAGTTGT	LINE	L1	L1HS	cacccagaggtaagattgccactcagaggcagaccactgcgtatttctttccgcttttttatggctgtcacttgttcatgggctccagatatcttgtaaa<br>atctagggaagatgtcagttagttgtaccaagttttctcctgggaccttgagtattaattttggctgaggtcacaagtgccgaggtggttcctttccacc<br>acattccttgtggtttaaccgcaagggctcagtgtgaatgtagtgaagggaagtgggcaagcccagggctatatccagggcttcctgaggtctttgtgca<br>gaggtataagagtgagccagctcatggagcttgccactaagtggaaataaggaagaatcatctgaggcagccatggacattt<font color="green"><u>GAAAATATTAAAACTAAG<br></u></font><font color="red">CAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGC<br>AAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATC<br>AGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAG<br>AAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGC<br>CGAATTCTACCAGAGGTACATGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAG<br>GCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATA<br>AAATACTGGCAAACCGAATCCAGTTGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAA<br>ATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCC<br>TTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATG<br>GGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGC<br>AATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTATATCTAGAAAACCCC<br>ATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCA<br>ACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCGTAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAA<br>GGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAAT<br>ATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTT<br>TAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATA<br>CTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATC<br>TACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTA<br>GAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGA<br>AGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGG<br>GATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCAT<br>CTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGTGAAGGACATGAACAG<br>ACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGA<br>TATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGT<br>GGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGG<br>TATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCC<br>AAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAG<br>GGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAAT<br>GAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTA<br>GATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAAT<br>AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>GAAAATATTAAAACTAAG</u></font>ttttgtggtaaagactaacacaggggcagtccagaggagactgatg<br>ttggtgagggtgagcaacatcacaaaccctacctggcattttctgagccattattatgtaccagcttttgtgctaagtgctgtacctgtattaaactgtt<br>ttatttccagtattcttgaagataggataccacaattttcccattttatagatgtgaaaaaggcacagagagggtaagtcatatggctaatgccacaggt<br>tttaagtggcagaatcagaatttgaactcaggcacatcttttctagactaatgctagtttgagttttttgggaagaggtaaagtttgaattgggctataa<br>aggccaggtggcaggggcaggagagaacattccaga	UCSC	<UL><LI>Bennett EA, Coleman LE, Tsui C, Pittard WS, Devine SE. Natural genetic variation caused by transposable elements in humans. Genetics. 2004 Oct;168(2):933-51.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15514065">PMID:15514065</a>.</LI><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	C:Reference; E:Insertion-specific detection:PCR	NA	48/48	NA	NA	NA	intron:RPIA:NM:144563:4/9	
0	chr6	74922169	74923304	2000039	0	-	L1HS233; Database43; RIP_L1_chr6_074_01	TGTCTAAACTGTAAGTCTGG	TTATTCCTTGCCTCTGCATA	LINE	L1	L1HS	tactactactagaagcaaaacttcccaattatgttttaagataaactaagacctaaattttacttgagtagaaaacagtaataagcaaggcccctacttt<br>ctattgaaaaatatttaaaatctatgcacttattctacaaagtcaaagatttttaaaatgcaattattctattgcatgtttaaattaccatctttccttt<br>aaaaatattcagaaattcaattgtaataacatttgctctcacttcaaatgcttattctaagacaaccatggattagagagcagcaaaagagtttcaaaag<br>tgagtccttttctgagaaagcagagtcagagatttcttattccttgcctctgcatagatcaggaattctaaggttagagtagttt<font color="green"><u>AATAACTTGGTTTTC<br></u></font><font color="red">CCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGA<br>CAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATT<br>TTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGG<br>CGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAAT<br>CAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACA<br>CTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAG<br>CCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAA<br>GACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAG<br>TTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAG<br>GTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGA<br>GATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTA<br>AAACTTAGAGTATAATAAAAAAAAAATAAATAAATA</font><font color="green"><u>AATAACTTGGTTTTC</u></font>aatcctcagcacttggttgtagacaactaagacacagatagatatagat<br>gtggatatagataaacaaatgtttgtaaggtatctttaaaaaactttgatattctgtacttttttttcaaattacaaagataagtgagaggttttagaga<br>tactatttaatgacaattgtggatcaaatttcctatttacaaaagttttattttctgtctcctggccagacttacagtttagacatttaatgaatggaac<br>ctcaaataataagattttcacaaactaaaggactgtgtctttaacacacacaaaaaaaaactatataagaaaaaaagaactgaattaggcacaaatctcc<br>tatttttattctttgctatactgtgatccacataat	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	59	1232	81	NA	intergenic	
0	chr4	123793236	123797455	2000040	0	-	Database44; RIP_L1_chr4_123_01	AAGCTTACCAGTTCTTTGTG	GAACTTCATCAAGGACTTTC	LINE	L1	L1HS	agatggtggagtcattaagataaaatgagcttggtcccaaatcaacacttgttggagagctgtctggtgatcagtaggacccctttgaactgtgatgtga<br>gcaagaaataaactactcttgtgaggccaccaagattttggctagcatttacctgaatactcatttttaaacttaattcttacagcatccctatgaaata<br>gttattatccccattttacaaatggaaaaccgaaaatgaaagtggctacaattcttgcatgaggcatagccaagatttgaatgcaggcctgtctgactcc<br>acatgcctccccctccctctctatctctctctttctatcctgaacgcagaagttcctgtggcgaacttcatcaaggactttcacagat<font color="green"><u>AAGAACCATTTT<br></u></font><font color="red">CCCTAAAAGAGCTCCTGAAGGAAGCACTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGG<br>AAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTA<br>AATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAACAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACAC<br>ATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCAAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAA<br>ACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAAT<br>ACAGGAGCACCCAGATTCATAAAGCAAGTCCTGAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAA<br>CATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCA<br>CCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAA<br>AGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCTGCTCAACTACATGGAAAC<br>TGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCA<br>GAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACA<br>TCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGA<br>CACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAG<br>AGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTC<br>TACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACCCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGAC<br>CAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAA<br>GGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCA<br>AAGCTGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCC<br>AGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCA<br>TATAAACAGAGCCAGAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAAT<br>AAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCC<br>CTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAAT<br>AAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTCTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTC<br>CTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCC<br>AAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAGTAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTA<br>CAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTG<br>CCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAA<br>AAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAA<br>AACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGAC<br>AAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCT<br>TCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCAT<br>TCAGGACATAGGCGTGGACAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTCAAGAGC<br>TTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCA<br>GAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACAT<br>TTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGA<br>ATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAAC<br>CATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAA<br>ATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGAC<br>TGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAA<br>TCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAA<br>GGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACGTTAGTGGGTGCA<br>GCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAATTATTAAA<br>AAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AAGAACCATTTT</u></font>atgcccttatgcagaaatgcatcaactctgtccaccaccaacagatggcagtagtggttgcctgtaaa<br>ccagcactttgaatttatgaacaaatggacttaagaatattatgaaataaaacataacctgtgtgtgcacagagagtttccaaatgttttgctgcctttt<br>ctctggtgagggataattttacctttttgagaattatcattgccaagttatttaaatgcccggggcttgtatagtctagaatcatgaagaaatggtctag<br>aatgagaccatttgaaaaaatgaggaaattggtttagaatcatttaataaccaatatgttcccttcagactctgacatttcattgtgcacatgtgagaaa<br>atataaaaaactggacccac	UCSC	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	48/48	NA	NA	NA	intergenic	
0	chr10	6451587	6457635	2000041	0	-	L1HS171; Database45; RIP_L1_chr10_006_01;AC193127	AAGAAGAGCACTCTTTTCTG;NA	TGCATAAATGGCCAACATTG;NA	LINE	L1	L1HS	ctgtgtcacccacacggttgggctttaagagatctgaggcttctgtctcttagaacactccctggagggacccagtgaatacactgtgagaagcccccag<br>agatgcactgtggatgagaactaagacatttgacacaacggtgaggttcttggctgacagctactgtgcagccatgtgagtcagccttcctggatgttcc<br>agtgcaggtgagcccacgtggagcagaagaatataccagctaaacacagccagctatagacttgtgttaggtaataaagagttgtttttaagccactaag<br>ctttgggacgatttattttacagcaatagataactgagacagtacaataacaagagaatctatctcctgaagaagtctctttc<font color="green"><u>AGGAAAATGATTTGCTG<br></u></font><font color="red">GGGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGT<br>ACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTG<br>GGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTT<br>CAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTATGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTC<br>TGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGG<br>TGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGTTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGGCAGCAGTAACCTCTGCAGA<br>CTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACTCAGCTGGAGATCTGAGAACGGGCAGACTGCATCCTCAAGTGGGTCCC<br>TGACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGG<br>GTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACC<br>ACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAAC<br>AAAGCTGGATGGAGAATGATTTTGACCAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGA<br>AGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGA<br>GAACTACGTGAAGAATCCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGTGAGAAG<br>GGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGA<br>AAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAG<br>GAAATACAGAGAACGCCACAAAGATACTCCTCAAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAA<br>GGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCAAGAAGAGAGTGGGG<br>GCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATA<br>GACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCTGC<br>TGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAACGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAA<br>TTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTG<br>TGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCAAATGGAAAACAAAAAAAGG<br>CAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAGGGCCATTACATAATGGTAAAGGGATCAATTCA<br>ACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTGAGTGACCTACAAAGAGACTTAGACTCC<br>CACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTC<br>TGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGA<br>CCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGG<br>ATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGA<br>TGTTCTTTGAAACCAAGGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTA<br>CAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAA<br>GAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACA<br>AAATTGATAGACTGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCAC<br>AGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTC<br>CCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAG<br>GACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATACT<br>CCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATT<br>GATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAG<br>GCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTT<br>TGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACA<br>GCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGT<br>TGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGATGACATGAT<br>TGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCA<br>CAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCC<br>AACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTC<br>ATGGGTAGGAAGAATCAATATCATGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACA<br>GAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACAC<br>TACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTC<br>AGAAATAATGCCACATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAA<br>AACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTA<br>AAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAA<br>AGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAA<br>ATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGT<br>GGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCA<br>AATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGA<br>ACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACC<br>CAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGC<br>AGAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGAT<br>GAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCA<br>TAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCACTG<br>GGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACC<br>CTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AGGAAAATGATTTGCTG</u></font>atttataaaattgtaagcatcacaactttcatga<br>actttccctgaaactctcacaggtggatagttgtagttaatttgcaagatgaagaagcctgtgagttgagaactgcatcaaggaaagccgtgaatttgcg<br>attcagaacagagcaactttcccatcattcacagcccaggatggctgagcacagccagaaaagagtgctcttcttttggccaggggcacctgccctacag<br>acaacaatttcttctagagcataaattgttcacctgaaaatattgtaaagtgttggtacttttagcaaggaaaaaagcttatattctagaaaaataaatt<br>cagaaaggacaccactcataattttggaattaccgataattaaattcaa	UCSC;UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R,Wilson RK, Eichler EE. A human genome structural variation sequencing resource reveals insights intomutational mechanisms. Cell. 2010 Nov 24;143(5):837-47.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=21111241">PMID:21111241</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR;E: fosmid-end sequencing	NA;NA	60;NA	6157;NA	91;NA	NA;NA	intergenic;intergenic	
0	chr2	34651133	34655080	2000042	0	+	Druze46; RIP_L1_chr2_034_01	ATAAGATATACATGCTACTG	TAGTATGTAATGCAGTTCTG	LINE	L1	L1HS	attgtaattttgtaattacattgaacccgccaacgtcctagtatgtaatgcagttctgattaagaaaaaggcatctctttaagttatgcactggagcatt<br>cactctcaacactgtggtggaagcaacaatgcatgccaagatagagcgtactacaaatatttgtaagaataccttgagtgctccttgagaaatcagactt<br>aatgggagatacccataattttttttaggttaactcaagatgtggtcctctcagtagctatgcattttgtaaagttcttgctctcttcttccagcacagt<br>tgggctgattttcctttgtgattcttaaatccttcatgcatacctttttagagtactgaatttattatactgtattttttt<font color="green"><u>AAAAAAATTATTATGTTTT<br></u></font><font color="red">GCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGC<br>CTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATA<br>AGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTT<br>TTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTTGTACCAGT<br>ACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAAT<br>GCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAA<br>ATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTATTTGTCTCCTCTTTTATTTCCTTGA<br>GCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTC<br>ACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTT<br>ATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCATCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATT<br>GAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCC<br>GGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACATCCCATCA<br>ATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGG<br>CTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTT<br>GATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCT<br>CTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTA<br>CCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGA<br>GCCTGTTATTGGTCGATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGT<br>TTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTT<br>GATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCAGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAG<br>GGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCT<br>TTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGT<br>CCCAGAGATTCTGGTATGTGGCGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAG<br>CAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATA<br>ATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTG<br>TTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGA<br>TCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTGAGGACTTGCTTTATGAATCTG<br>GGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGA<br>TCTTTGTTGGTTTAAAGTCTGTTTTGTCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTAT<br>TTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCTAACTTGCCAGAGTGAACAGGCAA<br>CCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAA<br>ACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACT<br>GGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGA<br>GGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAAC<br>TAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATGAAGACACATGCACACGTATGTTTATTGC<br>GGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTAT<br>GCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAAC<br>ACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAG<br>GGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGC<br>ACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAA</font><font color="green"><u>AAAAAAATTATTATGTTTT</u></font>aatttttcatggctgtgtccctctgccccagta<br>gaatgtatatcttatcactctgtgcggtcctcggcacaaagtgtcagttgcttaccatagctaaactggatggggaaatattactatgaccaggagaggg<br>acacagaagaacacagacttatctttctcaaaatagagaaagagaaaaaaaaaagaatcatgttaatcgcttgaaggacttacacaaaatttggcatgct<br>taatttaacaatatcaataaacatgaaaacaacagttacatctatgtgtatggtatgtgtcagatactgtttaaagatgccttcacactgcttggacact<br>aagaagcaaacccatcttaacatgatttcactctttcatagcctttgt	UCSC	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	48/48	NA	NA	NA	intergenic	
0	chr16	82228359	82234413	2000043	0	+	Druze47; RIP_L1_chr16_082_01	AGAACTTGATATATACGAAG	TACAGTTTGAACTCAACAGC	LINE	L1	L1HS	ctgaactaatctacattcccaccagcagcatatatgtgttcccttttctcctagttctaccaacatctgtaattttttgacttttgaacaaaagccattc<br>caactggtgtgagatggtaactcattatggttttgatttgcatttctctgctgattagtgatgatgagcattttttcatttgtgaattggccattcatat<br>gtcttctcttgagacatgtctgttcatgtcctttgccctctttttaatggttatttgtagaaaaccattttaaatacagtttgaactcaacagcttttta<br>tcccctctaaaattatttttctgattaaaacataactcatttccattgtaaacaacattaaaatatcaaaaacgtctaatag<font color="green"><u>AAAAATTTAACAGATCTC<br></u></font><font color="red">GGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGCTCCCAGCGTGAGCTACGCAGAAGACGGTGATTTCTGCATT<br>TCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCA<br>TTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGATGCACCTGGAAAATCGGGTCACTCCCACCCGAA<br>TATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCT<br>AGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAA<br>GCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGT<br>AACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCT<br>CAAGTGGGTCCCTGACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGATACCTCACACGGCAGGGTATTCCAACAGAC<br>CTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAA<br>GTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCAC<br>CAGCAACAGAACAAAGCTGGTTGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAAC<br>CAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAA<br>ACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAA<br>TGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGAT<br>TGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAAC<br>GTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGG<br>AAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAG<br>AAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATA<br>AAATACTTTATAGACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACC<br>GGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAAT<br>GACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAA<br>GACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCAAATGGAA<br>AACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAA<br>GGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGA<br>GACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAAT<br>TGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTA<br>TTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAA<br>CTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGG<br>CAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGC<br>ACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCT<br>AGCAGAAAGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTG<br>AAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCAC<br>CACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATAAATTCCTCGAC<br>ACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATCGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCA<br>AAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAA<br>AGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCC<br>TTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCC<br>CTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGC<br>AGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTAT<br>GACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTAT<br>TCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGC<br>AGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAAT<br>GTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAAT<br>ACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAA<br>CATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATG<br>ACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTG<br>GAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAG<br>AACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAA<br>TGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAA<br>ACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGC<br>AATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACA<br>ACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACC<br>CCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCAT<br>CAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCCGGAGAGGATGC<br>GGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTACTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAA<br>TACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACT<br>ATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCC<br>ATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCA<br>TATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGA<br>GGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATG<br>TGCACATGTACCCTATAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAGAAAAA</font><font color="green"><u>AAAAATTTAACAGATCTC</u></font>tccacacacctgagagaggactatgtt<br>ctttcccttcgtatatatcaagttctacttttttatttacaaacgtgtgatcacactctcttcagtatattgccatctgtctcacgatttgtatcttttt<br>ccttgtctgtaaaaagggagaactattaataatactctatttctttagtctttggtgaggatcaaatgataaaacacatgcagagagtttaacccagcac<br>ctgctacatagtaatgtctttgttgatgttatttttattgttcccccttcagcttatgctacctgctttgggtgatcttggcctttcttggtggcaataa<br>agggcagagaaactccataatgtttagtaatccaagtcagtttgcagaagcagtc	UCSC	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	48/45	NA	NA	NA	intron:CDH13:NM:001257:8/14	
0	chr9	68343959	68343960	2000044	0	+	Druze48; RIP_L1_chr9_067_01	CATCTCTGATTATATGTGAA	GACTTATGTCTAACCTTTGC	LINE	L1	L1HS	ggaataaagctagaaataaacaacaggaggaaattcagaaattgtgcaaatacatacaaattaaacaacatatccttaaacaaccaatgggtcaatgaaa<br>aaaaatttaattttaaaaatgtcttaagacaaataaaaatgaaatcagaacatatgaaaacttatgaaatacagcaaaacagtccttagaggaaagttta<br>tagcaatgcatttctacatcaataaggaagaaagttaatgaataaatcatctaacaatgtatttcaaggaagtataaaatcaagaacaaactaagaccca<br>aattagcgaaagaatataaagatcagagcacaaatatacataatgaagataaaaaatacaaacgactaattaaatgaaggaatctttttt<font color="green"><u>GAAAAGGTAA<br></u></font><font color="red">TGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATC<br>CAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGCCAAAG<br>ATCAGATAGTTGTAGATATGTGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTA<br>CTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTT<br>CCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATG<br>GCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCT<br>CCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTC<br>TGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTT<br>TCGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCT<br>TCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGC<br>TTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGA<br>GTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGA<br>TTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCG<br>GTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATC<br>AGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACC<br>TCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAGCTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATT<br>CAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTAACCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGT<br>TTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGCTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTT<br>TCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTAT<br>TTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAA<br>AACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAAC<br>AGGCAACCTACAAAATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAA<br>AAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATC<br>ATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGC<br>TGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATC<br>TAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTT<br>TATTGCGGCACTATTCACAATAGCAGAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAA<br>TACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAA<br>CCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCG<br>GGGGAGGGGGGAGGAATAGCATTGGGAGATATACCTAATGGTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTA<br>ACCTGCACAATGTGCACATGGTACCCTAAAACTTAGGGTATGTTTCCCCAAAAAAAAAAAAGAATAAGAATAAAGAATCTCATTGCCCCCATAAAAAAAA<br>AAAAA</font><font color="green"><u>GAAAAGGTAA</u></font>acgacaaatgttttgtcagactaagaaaaaaagagaaaattcacatataatcagagatgaaaaaggatatactatgatagactct<br>agagaaatataaggaaccatgagtaagtactacaaacaattatatgccaataaattgaaaaacttagaagaaatacgtacgctcgtggacacatataccc<br>tatcaaaattgaagaaagaagaaatagaaaatgtgaacacaccaatgacaactaatgagattgaaggagcgatttaggctctcagtcaaggaaaatccaa<br>aagacttcacacagtagctcacacctgtaatctcacagtttaggagcccaaggcaggagaatcaccagaggccaggagttcaagattagcctgggcaaca<br>caatg	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	48/48	NA	NA	NA	intergenic	
0	chr18	67768252	67768253	2000045	0	-	Druze49; RIP_L1_chr18_067_01	ACATTTGCTTCTCAGTTTCC	ATCAGATCCTACAGCAGAAA	LINE	L1	Ta-1	actggcattgtaataagcctggggatgcagtggcccctggacagtggctctaccagtagtgcactaaacaggctttaagaaaaaagctgtagctggagga<br>gtgaccctttccaccatgtctccgcagagctacatgctctgacttttatctcataatgtttttctggttttatacatttgcttctcagtttccattattg<br>ggctgattttcttcaccctgttctgtctgtcatcccatgggagtgcttttcaattccgtttattcagcaaatctgtttacagtacatttaaacactctct<br>catgttggacacttggaaaaaaaatcatcctgttttatgttaccacagtgcttgtgattcttctctgagttataaaaccaatctttgcaaaaaatgtgtt<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>gaaatttaaacacaaagtgggtcacctctaaaactatagaatactgcttcaaaaataaaatgcatttaataaactcattt<br>aagtactactctggcagtcaacttgttaatatggcaaatatagagatggaaatcagacgatgccaatactggcattgtaataagcccagggatgcagtgg<br>cccctggacagtttgataagcactttctgctgtaggatctgatgccatgggaggattggacaaagagacacattaagaaacagtaaaataaatgctagga<br>ttgtacatcagctgatatttttatgtttcctaaaaaatctcttgtctgattcctcctaatcaaagagtcttttatatttatatcctcctttagaaatagg<br>aagggattaggcatcacttc	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	50/48	NA	NA	NA	intergenic	
0	chr3	187854801	187854802	2000046	0	-	Druze50; RIP_L1_chr3_187_01	CAGCTAAGGCTCCTAATG	ATGGCTCTTTGAACTCAATG	LINE	L1	Ta-1	tgaagagcaagcaaagtcagcattgccagatgcttgaaagtgtaagtaaaagtgaacagaaattttttttttaatttaaaataaaagattgttagggaac<br>accaagtcagtgggttatgggaaaagagatagattcacattactgtgacctaaggaatgaagaggtggtggggaagtggcaagcatgggaacaatctagt<br>ttttcacgaattaagccatggaaagacaaaggaggtggtagatagaaggagaaacaaagtctgaggcccttccccatccttttaccagtagagaagggcc<br>ttatagaacaccccttgggaaaccccagctaaggctcctaatggtttctctctgtttgcctcaggcccatcctttgattttctctgcctggtcttgtctc<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>ccaggctggctccagggaattgaataacccaggctctccctgctggctagtttaccattgagttcaaagagccattggga<br>ggaggagattggaaggaaacaggaagggagggagaggggagggtgcttattccctgctccttctcgttccagcaccgggttctgcaggggctgcatccct<br>ccaccagggcggcttctgcagggcggcttctccacaggatagttccaacagagcggggaagctagccactcctgctcctgctcagcctcgggtggcaaag<br>gctgtccaggtgcctcagcatcccttggccttcccttagcctgggcaacaagccttcactaaaggtcccttcactgaagtctttttctttttttgagatg<br>gcgtctagctctgttaccca	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/48	NA	NA	NA	intergenic	
0	chr13	47754437	47754438	2000047	0	+	Druze52; RIP_L1_chr13_047_01	CCTGTCATATAACTCCTTGA	TTATCAGTGTTCTTTCCTGG	LINE	L1	Ta-1	agaaggattttatttctcttatctgctccatctcttcttagtttaaatcccattgaacctccaacttagataatattagattcacccttcctttattgaa<br>acatatagtgcacgaataatcctaaattgttgggttgaattggaaatggatgggaggcaagagatgtcacagcattttcctttcctggcagtaaagtttt<br>atcagtgttctttcctggtggcgtggctagaaatggcaaccaagaaagtgactcagtttacccctgattttcagtttgtactgggggcagtgagtgggag<br>tcccacctctatctgcacttaatgctgtttgacttgggcagcactttccatacttgccacctccccatgtcctccaaacctcccaacaatctgatagaaa<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>tcatctgttctccatcattttcaccaggaagctaggacagtggctcaaagtgtaaactgaaggtccctgagattccctga<br>gatccttacagggagccattgaggtcagaactatttcttgatgagttaagatattatttccgtttttcatttttattatctcaagtatgcaatggagttt<br>ttcaaggagttatatgacaggtgatattgcaactcattgaatgcagaagacataagaatccagctgtcttccacttagagattttctaaaataagatgtg<br>actctcactaaatgtttttattttggaacgaattcataaaactatgtcatttttgctaacatgtaatgggcttactattgttattttaattaaattgata<br>aatatatatttaaaatgttc	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/48	NA	NA	NA	intergenic	
0	chr4	175968306	175968307	2000048	0	-	Druze53; RIP_L1_chr4_176_01	ACAGGGATTTAGAATGTAAC	AGAACAAATTCTCAAGGCAA	LINE	L1	Ta-1	agaaaagaaagactatcccttcccagaaggaagctaggagcaacaatacctatgagaaacattttatagcttgagatttattttaagaaatcaactgcta<br>tttcacggatttgacaaaggaaagtaatattgacaaactatttccctgaaatgctgctacagggatttagaatgtaactggcatttttttaaagcttgtg<br>tatgaagctgctactgtggtaattgatatataaccacaaacttgcatttataattttgactctaatcattatagccatttaattaaaatggatttcaaag<br>tctttatgtggatttaatttcacttacaattacttaggtaatacataattatgtcttcaatataaaaatccaaatattttggataaatgaaaagtttccc<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>ttggttgccaacactgtcttagttcccttcttggagataatgactgaaatcatttaatatgtttctttccagattatatt<br>ttatatatttctacaaatatatgtgaccacaaataaatacatatgtatataatatatatatatttaagaaaaatgttccaattaggggattaatactact<br>tatccattccatgtgtttcctttactttgaaggggagagagttgccttgagaatttgttcttgcctctccccaccgctaatccattctgccacagaatag<br>agaagtgaatattctgttgaggaggtttctagtccagcatcttttgtttcctttcctctcacttctgattgtcctttgctctgttcttctctaactgctc<br>ctttcttccaaaatagcatg	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/48	NA	NA	NA	intron:GLRA3:NM:001042543:1/9	
0	chr5	34183704	34189726	2000049	0	+	Druze54; RIP_L1_chr5_034_01	CTCTCATTGGTATTAGATAG	CTAAACTAAAAGTTGAAATTAA	LINE	L1	L1HS	gaaaatgtggtataaatacattatggagtactacagagccatagaaaaaagaacgaaatcaggtcctttgcagaaacatggttgcagctggtggtcataa<br>tactaagcaaattagtgcaggaacacaaaaccaaatatggcatgtcctcacttataagtgggaaataaatactgagcacacatgggcataaacatgggaa<br>aaagagacactgtggactactagatggggtagaaaaaaagagtggtgtgaattgaaaaactacttatcatgtactatgcttactacctgggtgatgtgat<br>gcataccccaaacctcagcatcacacaacagattcgtgtaacagacttgtatatgtaccctcatatctaaactaaaagttgaaatt<font color="green"><u>AAAAACAAAAACAA<br></u></font><font color="red">GGGCGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGG<br>TACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCATGCGCGAGCCGAAGCAGGGCAAGGCATTGCCTCACCT<br>GGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTT<br>TCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTTGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGT<br>CTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCAGGAAGCTCGAACTGG<br>GTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAG<br>ACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCC<br>CTGACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAG<br>GGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAAC<br>CACAAAGATGGTGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGTGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAA<br>CAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAG<br>AAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGAGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCG<br>AGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCGATGGAAGATGAAATGAATGAAATGAAGCGAGAA<br>GGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTG<br>AAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCA<br>GGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTA<br>AGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGG<br>GGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATGAGTGAAGGAGAAATAAAATACTTTAT<br>AGACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCG<br>CTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAA<br>ATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGT<br>GTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAG<br>GCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTC<br>AACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTAACCTACAAAGAGACTTAGACTC<br>CCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCT<br>CTGCACGAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCTATTCCAAAATTGACCAC<br>ATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTA<br>AGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTT<br>CTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAG<br>AGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAA<br>TAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAAT<br>TGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAA<br>ATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAA<br>GACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACC<br>AGATGGATTCACAGCCGAATTCTACCAGAGGTACATGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCT<br>AACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATG<br>AAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTG<br>GTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGAC<br>AAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCA<br>ATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGA<br>AGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTT<br>TATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAG<br>CATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACT<br>TACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCATGG<br>GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAAT<br>TGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACC<br>TGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAA<br>ATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACT<br>GGCTAGCCATATGGAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAAC<br>CATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTGCAAAACACCAAAAGCAATGGCAACAAAAGCC<br>AAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTT<br>TCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGC<br>GAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATC<br>AAAACCACAATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACAC<br>TTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGC<br>CATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAG<br>ACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGT<br>TCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGG<br>TGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAG<br>ATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAA<br>AACTTAGAGTATAAAAAAAAAAA</font><font color="green"><u>AAAAAAAAAAACAA</u></font>aagcaaaacaaagcaaactaactaggtgagattatagatgtgttaactgacttgattgttgtt<br>atcatttcacataatatacacataccaaataattagatagtatagattaatcacataatttttgaattatactttattaaacctgcaaaataaaaaaaaa<br>aaatgtcatttggtataaataatgcaaggtctatctatctaataccaatgagagttgtttcctattaagtatagagtttttgtgaattattatggaattt<br>ttcctgcatttattgtgaagtagtagtaatcatcggaaattgaaatttgttaatatttttacttttgaacatattttggaaatggaaagtataacgagtt<br>tttttcttcttataattaatcgc	UCSC	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	42/48	NA	NA	NA	intergenic	
0	chr1	216312262	216313112	2000050	0	+	Druze56; RIP_L1_chr1_214_01	CATCAATGTAACCATTCATC	TATAGAAAGCTTACCATGGC	LINE	L1	L1HS	gcctgtaatcccagctactctggaggctgaggcaggagaattgcttgaacccagctactctggaagctgaggcaggagaattgcttgaacccagtgagcc<br>gagatcataccattgcactccagcctgggcaagaagagggaaactgtctcaaaaaaaaaaaaaaagaaagaaagaaagaaagaaaagaaaaaaaacatga<br>atgactagggaactctatcatatccttacctgagttacttctttgcactctacttaaggtcaaaacaatgatatagaggaaagaggaacaacaaggcaat<br>ccataattcctttttttagtttagtgcttcttttcctatcaccactaagccaaagataggatagaaaatgataatagaacatatttgtat<font color="green"><u>AAAAAAAGAA<br></u></font><font color="red">CAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAGACATGAAGAAATGCTCATCATCA<br>CTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGA<br>GAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGA<br>ACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATT<br>GCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACT<br>ATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAA<br>ACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGG<br>AGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCT<br>GCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAA</font><font color="green"><u>AAAAAAAGAA</u></font>ataaaaacatttgagtttgttttgacagtttccactgtt<br>ccagtaagaagaaaagacatgaatgtttgagctgtgaaatataaaatatgtaattttgatgagtctgcatataattaaatgcttttgtattcaaatttaa<br>agttggtattgcacaacataaggatgaatggttacattgatgctgataattaaaaattttcatttttctttacttagaatgacatttaatagcaaataaa<br>tagcatcacaacaagtcaagagagagaccatggaagacaagaagaagtttgatgttttagtgccttcaacatcactgttttctctgctttgtgaaaaggg<br>agccctgcatttttattttgcactgagccctgcaaattgtataactaaccc	UCSC	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	48/48	NA	NA	NA	intergenic	
0	chr12	33216925	33216926	2000051	0	+	Druze57; RIP_L1_chr12_033_01	ATAGAGCAGTACTCATGAGA	TGCAACCACAATCTACTAGA	LINE	L1	Ta-1	aagaagctctttttacccgggaaaaaagatgttatagagatagagcagtactcatgagactttgagcaaatgatgtatgagtcttacccactcttattca<br>tagtctaggacagaaaatacaaaatagtctaagaaaatgtaatgagatttatatttgaaattgcctctttcattagaactaaggtgtgttgatgctagtg<br>ttttcttgatctttatagaacttatcagtggaagaatttaaaaaaattgtttcatgaatgttacatagttaacagcaattgtactaatgccattgattcc<br>aaaatgtattccaaattcaaaaagataaaataggaaaaaacaacataaatcttagaattggtgaagtatataggtgatttgaatgttattggaagggcta<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>aaataattaggttctcagttgggtctctaagaaaatttgcaggacgatatactgctagtccactgagaatgcttctacct<br>ccgatatcacacttaagagttatgcttagaagtaggaagctactgtcaccactatacttgcttttcatacttagaaaactagaaaatgaacactgaaatt<br>ctgttcaaggaagatgcacagttccaaacttttttggtcaagaaacaccagctaatagtcatagaagataacatctgccttatgtttatttttccagtct<br>cacaagagttcatctaattggtggaacctaatttgcatcaagaacccttgcttcaagggagtctagtagattgtggttgcAGCTTCTAACCTTTTTAATT<br>ATAAGTATAGAATGGGGATT	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	50/48	NA	NA	NA	intergenic	
0	chr4	137434104	137440151	2000052	0	-	AC018680; Druze58; RIP_L1_chr4_137_01	TACCTAATACATCTTCTGCC	AAGTCAGTTGCAACAATGG	LINE	L1	L1HS	tggaacttgcagcaatctcacttgtgtatactaaaataggagaaaaatcttatgaaactacaggaaggtttttgcttagctttctctcaaaatgacagaa<br>taagttgttgatgctttttgtctctgcctgcctctgagttatgaaaatagcattttcaatttcgcacattatctcttcagctatcacgaacaatgcggtc<br>cattttcctcaagttccttgtcatcagcaacacctggaagcaagttgaaatttagattgttttgctttgttttatttatgtttacttagaatgttacact<br>tttccgacaaagaattctttaaaatctaagatcacattcaaataggtaagctatttctacttcttttaaagttaagtataacatc<font color="green"><u>AAAATTAATAGAACA<br></u></font><font color="red">GGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTACC<br>GGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGA<br>AGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAG<br>ACCGGCTTAAGAAACGGCGCACCATGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGA<br>GATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGG<br>AGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTT<br>AAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGGACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGA<br>CTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTC<br>CTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACA<br>AAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAA<br>GCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGT<br>TGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAA<br>CTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGA<br>AGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAG<br>TGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAA<br>ATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGG<br>CAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCC<br>AATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGAC<br>AAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGC<br>AAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTC<br>ACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGC<br>TGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAG<br>GGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACA<br>AGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCAC<br>ACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGC<br>ACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCA<br>CATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATT<br>AAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGT<br>TCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAA<br>GAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAA<br>ATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAA<br>TTGATAGACCGCTAGCAAGACTAATAAAGAAAAAGAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGA<br>AATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCA<br>AGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGAC<br>CAGATGGATTCACAGCCGAATTCTACCAGAGGTACATGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCC<br>TAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGAT<br>GCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCT<br>GGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGA<br>CAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCC<br>AATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGG<br>AAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGT<br>TTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAA<br>GCATTCTTATACAGCAACAACAGACAAACAGAGAGCCAGATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAAC<br>TTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCATG<br>GGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAA<br>TTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTAC<br>CTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGA<br>AATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAAC<br>TGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAA<br>CCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGA<br>CAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATT<br>TTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGG<br>CGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAAT<br>CAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACA<br>CTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAG<br>CCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAA<br>GACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAG<br>TTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAG<br>GTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGA<br>GATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTA<br>AAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAA</font><font color="green"><u>AAAATTAATAGAACA</u></font>acaggtggtttgtgcctcatcaccatagaaaaagtga<br>aatattagctgtgcatacattacaaaataaatctaataataattaatctaaggcaaaatgaatgatggcagaagatgtattaggtaaaatagttttagaa<br>aatgtgtaaaatgaaaaaggaatacctttaaatgtttgaaattcagaagtattaggtcagattctcccaagctgtattctctaaattgctttagatttta<br>tactttagtctttctcccagccttcctgaaaggggacccagtagacatttacctatgttgattttgcattagagaaagggaaataggctgggcatgatgg<br>ctcattcctgtaatcccagcactttgggaagctgaggcaggtgaatca	UCSC	<UL><LI>Brouha B, Schustak J, Badge RM, Lutz-Prigge S, Farley AH, Moran JV, Kazazian HHJr. Hot L1s account for the bulk of retrotransposition in the human population. Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5280-5. Epub 2003 Apr 7.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12682288">PMID:12682288</a>.</LI><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	50/48	NA	NA	NA	intergenic	
0	chr12	41543253	41543254	2000053	0	-	Druze60; AF417153;1104685300946; RIP_L1_chr12_041_01	TTTATCCTCAAATACTTGTC;TTTGATGCTTATTGGCAAACC	ATAAGTGACATAATACAGGC;TTTCACCTCTCACACTGAAAAA	LINE	L1	Ta-1	atatgctttctttcctaatgttcttggaatgtttaccaaaacatgtaaaataaaatgctataaagaaaacttcaaaacttccaataagtgacataataca<br>ggcttcattacgtgactctatttttaaaaaagtttaaacattaattatacaattagcaattttaaaatataaataacttgagttgaaagaaaatcaaaat<br>tcttagtataagctatttagaaaatagcagtgggaactatccatcaaaacggatggcaaaagctgccctcagagaaaaatttatagctttagggagttta<br>ttaataaagaataaatgaaaataagcaaaatattcaactcaaaactctaagaaaattaaattagacatctaatatttcacctctcacactgaaaaatatt<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNNTGTATACATATGTAACTAACCTGCACTATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAA</font><font color="green"><u>nnnnn</u></font>aaaa<br>agaattaaaatacttattactgacaagtatttgaggataaaaatactattgagaattctataaataggtacaaatctcctgaggtttgccaataagcatc<br>aaaatccctagcacttctatttctacaagtttattctaatgatagatttgctcaaagatacatatagctttgttttgttttgagacagagtctcactcta<br>tcaccaacgctggagtgcagtggcatgatcactgctcactgcaacctcaacctccctggagggctcaggtgatcctcccacttcagacttccaagtagct<br>ggaactacaggtgcacgccaccacacccagctaatttttgtattttttgtagagacagggttttgccatgttgcccaggctggtctcaaaactcct	Other;Venter	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Ovchinnikov I, Troxel AB, Swergold GD. Genomic characterization of recent human LINE-1 insertions: evidence supportingrandom insertion. Genome Res. 2001 Dec;11(12):2050-8.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=11731495">PMID:11731495</a>.</LI><LI>Xing J, Zhang Y, Han K, Salem AH, Sen SK, Huff CD, Zhou Q, Kirkness EF, Levy S,Batzer MA, Jorde LB. Mobile elements create structural variation: analysis of a complete humangenome. Genome Res. 2009 Sep;19(9):1516-26. Epub 2009 May 13.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=19439515">PMID:19439515</a>.</LI></UL>	C:Comparative personal genomics:Venter; E:Insertion-specific detection:PCR	 TSD unavailable;NA	48/48;55	NA;1292	NA;133	NA;NA	intergenic	
0	chr11	57928326	57928327	2000054	0	+	Druze61; RIP_L1_chr11_057_01	TCAAGATTTCAAAGCTCACC	TGTCTCCTTTGGTACAAACT	LINE	L1	Ta-1	gcacaggaggttgagtaacatattcatatttatacaagtattaaatggcaagccatgctttggacccataccaacttttgaacccatgctgaatggttcc<br>taaatctaatggtctaaactgaatttaaatcaaattgaatacaactgtatttacaatcactcattgtctcctttggtacaaactcagtgttttgagtttc<br>acaatgaagtaagcaagtaatatatgcttagtaaatgggctggggtaacagggttgtttggggcatgttcaactaccagaaacaattctgagagaagcct<br>atcaccaaacagagcagatacagagcttgagttcttgaaagagttgcgtatcagtccacgacttaccacctgggaatcactggttctaatctaattccct<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>taaacatcacattttcttctgtaacactaaaacagtaatgtgacctactttgaggtattattgtgagaattaaataagat<br>aatccattaaaaatgctagatgttaagcacagcctaatgagtgctagttataatattaaatattattattagataggtgataatctttttgttggtttga<br>taaaggtggatggtgacaagcagggctgcaggcatgggtgagctttgaaatcttgaagctcccacctccaattttcttttcctccatgctaggaccactg<br>agattttctgtgttcttcagtgattttcaggttgttcttcctccaagcaaatgattgtctgctccggaagattcacatgagcctttctttttcttaattt<br>ctcccttgaaatccacattt	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/48	NA	NA	NA	promoter:OR5B3:NM:001005469	
0	chr6	63425742	63425743	2000055	0	+	Druze64; RIP_L1_chr6_063_01	TGCATACTTTTAGGCTAGAA	GTGTCTAGACTTTAGCATTC	LINE	L1	Ta-1	accaatcaaattttttcctaaataaataatgtgtgtattgctgctttgcaaaactaatgcaccttctgaattatgaaatatataattttactgagagaaa<br>aatgaatagctgataacactgctaaggtttattgactgattttcatgtgccaagatgcactttgctaagcactttacatgaattataatatcttgggtag<br>ttctctcaaaaacttttacaaaataggtattgatattatttataattacattttaagaatttgaagcaccagaggagttaagtaacttgtcagaagtcat<br>aaagctggaaaagtcttgggtgataaataaaacccaggtctgagatttcaaaaatctaggttccagaacaacactgctcctcagtgatattttagtcaca<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>atttaagcatacatctttaaatgctaaagtttaggggtcagcaaactggcctatgcttcaaatacagcctgttgcttgtt<br>ttggaagttaacacttcatggaaacacagttccacctattggtttacatgtgcctaaggttgtttcattacaacatagttgagtaattgtacctgagacc<br>acatggctcacaaagcctaaatattcactatttgatcctttacaagaacagtttgctgatctgtgctttagacttttaatttgaaatttgaaatccatgt<br>catgttctcagatatttactacactttctgtttctatcaatttggaaatatttaatatggttggagtaataattacatatttaacaaatacatcaaaatt<br>atttgatagaagcctaagtc	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/48	NA	NA	NA	intergenic	
0	chr6	108893768	108893769	2000056	0	+	Druze65; RIP_L1_chr6_108_01	CCCTAGAGTCATAGAGTCA	TGACTTCAATATAAGTTGCC	LINE	L1	Ta-1	gctgaccttaggtcttatgtcccaaataccagatttttaaaaatgagataatcctggtccttctttagagcctcacaagcatggatatatttctgaatag<br>agatttttagtgtaaggcaatgttactatctttttaaatggtttcactacagaactaacaagagggccctagagtcatagagtcactgctgctgctgctg<br>ctgctgctgctaaagtttttacaataaagttgtgttcttaaattttcctactttaaaaagtgaagatatcttgaagcacgggttttaaaattttatgtgt<br>atcatgacaattgagaaaatgtttctagattaactattttgtttatttttaatttttaattagttcttttaatttaatttaacttttttaaagagttatg<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>tttaacactttaaaacatagtgacacttttttaaagtgtcactatgttgcccaggctggcctcaaactcctgggctcaag<br>tgatcctcttgactcagcctccctagtagctgagactataggcatgagtcactacactatggattaagtcttttgttaaattaaattacatttgtgtttt<br>tatgcccaatccttgttaaaaaataaacttgaggcaacttatattgaagtcatttataatttatccaccataatcactaaaatggaagagatggaaaatg<br>ccaagtattggcaaggatgtggagaaaatggaactcttttttgtatcactggtgggagtataaattgctacaaccaattggaaaactggcaacatctcct<br>acactgaacataggtatacc	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/48	NA	NA	NA	intron:LACE1:NM:145315:8/13	
0	chr3	89592670	89598696	2000057	0	-	L1HS508; Druze66; RIP_L1_chr3_089_01;AC213268	GAATCGAATATGCCGAATAC;NA	TTTGAAGTTATAGCCGTTAC;NA	LINE	L1	L1HS	agaatagtaatatattttttccgtacattttataactgttttttaaaatttcaaatgtttccccaatgtatttcagggggaaaatcttatatttgccaat<br>ttattttaatgttgattgccgatgaccttgatctttatcactaaaattaaaaatccagatacgataaaatgaatttaatttttcatcagtaactaaaaat<br>aattttgaatatatacagttcccaacaggaacctagtacataaatgacacattaaggagaaataaagtcattgtgtttattttaattatctctaggcctt<br>aaggacaaaaatctttgaagttatagccgttacacctggtttaattcctccgtgtggtaaaattagctgttttgattttaagatt<font color="green"><u>AAAAAAGAGAGACAG<br></u></font><font color="red">GAGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCATAAGACGGTGATTTCTGCATTTCCATCTGAGGTA<br>CCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGG<br>GAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTC<br>AGACCGGCTTAAGAAACGGCGCACCACAAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAGTCTCGCTGATTGCTAGCACAGCAGTCT<br>GAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCAGGAAGCTCGAACTGGGT<br>GGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGAC<br>TTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACAGGCAGACTGCCTCCTCAAGTGGGTCCCT<br>GACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGG<br>TCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCA<br>CAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACA<br>AAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAA<br>GTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAG<br>AACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGG<br>GAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAA<br>AGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGG<br>AAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAG<br>GGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGG<br>CCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAG<br>ACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCT<br>GCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAAT<br>TCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGT<br>GCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGC<br>AGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAA<br>CAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCC<br>ACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCT<br>GCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGAC<br>CACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGA<br>TTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGAT<br>GTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACACATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTAC<br>AAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAG<br>AAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAA<br>AATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACA<br>GAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCC<br>CAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATCGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGG<br>ACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTC<br>CCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTG<br>ATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGG<br>CTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAATAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTT<br>GACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAG<br>CCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTT<br>GGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATT<br>GTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCAC<br>AAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCA<br>ACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCA<br>TGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAG<br>AATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACT<br>ACCTGACTTCAAACTATACTCCAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCA<br>GAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCTTATTTAATAAATGGTGCTGGGAAA<br>ACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAA<br>AACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAA<br>GACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAA<br>TTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTG<br>GGTGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAA<br>ATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAA<br>CACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCC<br>AGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCTCAATAGCA<br>AAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATG<br>AGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAATAAAAAACCAAACACCGCATATTCTCACTCAT<br>AGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGG<br>GAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCC<br>TAAAACTTAGAGTATAATAAAAAAAAA</font><font color="green"><u>AAAAAAGAGAGACAG</u></font>agagatcacttgggtattcggcatattcgattccctctaaaaggttctgtatcatatt<br>tattcactgagcaaagtcaccctgtcagtttcagaatttgaggtcaaagtcattttgagaaataaaggcagattgtcttttggttgttcgatttgtcttg<br>aaggatatggtatttgtcaaaacagcagttattctcaaaaagaattctattatgtactcttagagatcagaagctttttactaatacttgtttattttca<br>ttaactggggaaaatatgagtattgtttatttttactcctttctatgctgcaagttaataaaaataaatcccttcaaagttagtgatcaatgcaatgaaa<br>caatatatttaaaaacatttcaattaa	UCSC;UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R,Wilson RK, Eichler EE. A human genome structural variation sequencing resource reveals insights intomutational mechanisms. Cell. 2010 Nov 24;143(5):837-47.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=21111241">PMID:21111241</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR;E: fosmid-end sequencing	NA;NA	58;NA	6144;NA	103;NA	NA;NA	intron:EPHA3:NM:005233:15/17;intron:EPHA3:NM:005233:15/17	
0	chr6	148237282	148237283	2000058	0	+	Druze67; RIP_L1_chr6_148_01	TGCTGTGAGTTCTGATTATG	TTATGGCTTCACAGTTTAGG	LINE	L1	Ta-1	gtctcagctactgtctgcttttagtgaacatgatactatgcttacttaattgctcaaaaaactttaggcaatgctaagcaagaatagaaggctttttcct<br>agggtggggaaacaggctgattggctttacttccttaattatggcttcacagtttaggcattacagaaatattacatatctgactcttaaggtctttacc<br>catttcatattagatcttagatttcttcatcccattattgatctaaaatgtctctagctctctcgggtaaaggaagaacatgcccatgtgttgcattagg<br>taattcctattattgaaaagctgtgttcaatctaaaatgaccttttcttggattttttgtcaagctagctttgcaacccatattaaattgaagcttttgt<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>atgaggaccgagaagcccgttgttgcgtgggcaatgacattcttagggtgtttgctcaggacagccggccctccggccag<br>ctggtggcaggagctggagcatttggccgagtagtcattgctgctttttttaagtccacagcaaagacagggcattgggtctgaatttggactataaaga<br>aggatggacaagtgctatgcaaagaaaaagttcatctgtgaagaggatctctgtgctttcataatcagaactcacagcatcagtacttttgaagatgtcg<br>aacaagaattttgggaggggcagcatggagatttggacttttcacaaaaataaatttgataatcagcattggttttactttaattttagtggtcctttat<br>gattgtacatgtttatagtg	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/48	NA	NA	NA	intergenic	
0	chr13	60360442	60360443	2000059	0	-	Druze69; RIP_L1_chr13_060_01	ACTACTTGGAAAGTTAGTTC	CACTAGTGTTTCCTAGAATG	LINE	L1	Ta-1	ttattttagcaacgtaaatgtcatacacactgggatttaacacagagcactttaaattccttgatacaacagctgttatcctcatttttagctgaagctc<br>aggtaaattaaatgcttattatataaggattcaaggaaagggatacgactttttaaaaatcttcatgtctaaatttaaatacttaaatattaagagaatt<br>tgagtttctttcttagttcatcatttcatgtctaattctcactagtgtttcctagaatgtaaaaattcagcatgttggggaccacaactaaattttccag<br>ataccccagaaataaatggccagagtgatctttgaaaatcgaaaaatgtggcagcaaccatcatcttctgcatttctcctttctgagatttcatagaacc<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>ccaaagagaacaataaaataagcttaaaacttcctctcactccactttaaatctaatattttatctaatgctggaacagt<br>gtcacacaggttatataaaaaagagaagaaagctattccaccattgtagagcactctagaactaactttccaagtagtaaatatccaggtcttagactat<br>taattattgcaaagaaaagaagaaactcattcattaaactttctatggttatcaacttaaatcaaccacatgccaaacgtcgtgctaagaactagacatt<br>tctgtgctttctactcaaggaatccaatgtagtaaaagaaacaggtgtgaacaaataatgtgatgtagtgtgatgagtgttatgacattggcctgcaaag<br>gaaaccaagaaattgtgtaa	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/48	NA	NA	NA	intergenic	
0	chr4	59317142	59317143	2000060	0	+	Druze70; RIP_L1_chr4_059_01	GCCTGTCATAAAGTTGTCAT	GCTGGTTAAGTCATATAAAC	LINE	L1	Ta-1	tacaatcgtataatacctgccttgtgcctgcaatgcataccaataataaatcacattttgtggtaaaattactgtcaaaacttcatagaataatggtcat<br>tatgtcaaaaaaatagactaagcaataaatttctacacaattgtgataatacttaatcaggtgaaaatacacatacatatatgtatttatacatatacac<br>ataaatgtatatatacccatatatatatgcacaaacacacacaaaagctggttaagtcatataaacatgagaataaaaaaatacagagaaaatatagaaa<br>caaacatagaaatatgtaaaagacatcaacagtcaatttataaaaatgcaaaatgatgaataaacaaatatattttattattactaataaataataaatt<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>tcagaagctagacttattttggctaataagattagcaatatttaaaatgtatttttagaaaatacagatgacagtgtcac<br>tttgtagacaatttttgtataataacagggatatatactagcacaattttttgatgacaactttgtgacaggcctgcaaatgtgatatatggatgtcttt<br>agacccagaattttacttctgagaatgtgacttaaggaaaaaattaggtaaatgtacaaagatggattgcaaggatgttcatcatgatgttggacaaata<br>gccccatgttgtcttttgaaaaggagtaaattatgtcaaattacatagtgaaatattaaaagaatattgaaataatgatacccagtcagtcctataacac<br>acatttataacatttactaa	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/48	NA	NA	NA	intergenic	
0	chr5	108622989	108629020	2000061	0	+	L1HS158; Druze71; 238563; RIP_L1_chr5_108_01;AC216137	GCTGCTTAGATATCTGATTG;NA	ACAGCGTGAAGTTCCTTATT;NA	LINE	L1	L1HS	ctgttagaggatggtcacagagttcttggaaaaaaacctcactgaatggaaagccaaaggaaactcaaaaggcttgttgatcttgacgtaagcacatgac<br>tgattcccttaggagtctcccagaaataactagaggagtgagaaggaagagggatcatgcccatgtgtgaaggtgaagccacggcctatgaaatgtgagt<br>ttttgttaatatgacctaagctgagactgggcaacctagagagctggggtcccattctcctgaaatcctcgagccatgagcagtggaggcttacataaga<br>gcatctgccagaacgtcagccagcccagagtagttcatgtttttgtaatttgagttttaattccacaagtaaaatatttctcttt<font color="green"><u>AAGAAATAAGAATGG<br></u></font><font color="red">AGGGAGGAGCCAAAATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTAC<br>CGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGG<br>AAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCA<br>GACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTG<br>AGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTG<br>GAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACT<br>TAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTG<br>ACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGT<br>CCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCAC<br>AAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAA<br>AGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAG<br>TTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGA<br>ACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGG<br>AAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAA<br>GTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGA<br>AATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGG<br>GCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGC<br>CAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGA<br>CAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTG<br>CAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATT<br>CACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTG<br>CTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCA<br>GGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAAC<br>AAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCA<br>CACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTG<br>CACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACC<br>ACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGAT<br>TAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATG<br>TTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACA<br>AGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGA<br>AATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAA<br>ATTGATAGACCGCTAGCAAGACTAATAAAAAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAG<br>AAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCC<br>AAGACTAAACCAGGAAGAAGTTGAATCTCTGAATCGACCAATAACAGGCTCTGAAAGTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGA<br>CCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCC<br>CTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGA<br>TGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGC<br>TGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTG<br>ACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATCTCAAAATAATAAGAGCTATCTATGACAAACCCACAGC<br>CAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCCCTCCTATTCAACATAGTGTTG<br>GAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTG<br>TTTATCTAGAAAACCCCATCATCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACA<br>AGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAA<br>CTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCAT<br>GGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGA<br>ATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTA<br>CCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCACTGGAACAGAACAGAGCCCTCAG<br>AAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAA<br>CTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAA<br>ACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAG<br>ACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAAT<br>TTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGG<br>GCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAA<br>TCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAAC<br>ACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGACCTAGAACTAGAAATACCATTTGACCCA<br>GCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAA<br>AGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGA<br>GTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATA<br>GGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGG<br>AGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCT<br>AAAACTTAGAGTATAATAAAAAAAAAAAAAAA</font><font color="green"><u>AAGAAATAAGAATGG</u></font>tgtctcattttatttttgagtagtgactttccaaacaatcagatatctaagca<br>gctccttttccttcttcctccaggctgtccaccatcgcctttcccttagcttccatctttccttgtgacatgaggaattgctgaggatttagatcactac<br>aaactcagcacttcaactttcctcaggggacaatttggcaggttgagccctttttgacccatttttagccattgatttctgatgcatcctttcttcttgt<br>cataactggggaaatgtcaggacctttgttttgaaatctaaatggcactatctttcaaggttgataatatcttcaaggtggaattgggaacattgcgtgc<br>ttgccttaattgtacccagactcccaggttgg	UCSC;UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Bennett EA, Coleman LE, Tsui C, Pittard WS, Devine SE. Natural genetic variation caused by transposable elements in humans. Genetics. 2004 Oct;168(2):933-51.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15514065">PMID:15514065</a>.</LI><LI>Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R,Wilson RK, Eichler EE. A human genome structural variation sequencing resource reveals insights intomutational mechanisms. Cell. 2010 Nov 24;143(5):837-47.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=21111241">PMID:21111241</a>.</LI></UL>	C:Reference; E:Insertion-specific detection:PCR;E: fosmid-end sequencing	NA;NA	59;NA	6194;NA	147;NA	NA;NA	intergenic;intergenic	
0	chr11	78066470	78072495	2000062	0	-	Druze72; RIP_L1_chr11_078_01	AAACATTCTAACTTAGATTC	AGCACAAATCCAGAGATAGT	LINE	L1	L1HS	aatctctgtgccatagtgcctctcacagcacgcactcaaatattggagaatttgttcattaacggagcagtgactcccacacccctcagctgcaagacca<br>ctgaggaggcccatagaaaggctgaggggtgtacaggacagggagtcatacattctggccagtggaacaggggaagcttctggaaagagatgacatttta<br>gcagagcctggagggagtcttaagccagcacttactgaagacgggggcagtgcagaggaaacagccaaggaagggccagagacaggagagtgcagcacaa<br>atccagagatagtattttcatctatagaaagaaactctatgtgtattttacagctgaaatttgcttttttcaccgtaagtttcatttagtt<font color="green"><u>AAGAATCTA<br></u></font><font color="red">GGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGATGGGTGATTTCTGCATTTCCATCTGAGGTAC<br>CGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGCGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGG<br>AAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCA<br>GACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTG<br>AGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATAGCCCAGGCTCGCTTAGGTAAACAAAGCAGCCGCGAAGCTCGAACTGGGTG<br>GAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACT<br>TAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTG<br>ACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGT<br>CCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACGTCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCAC<br>AAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAA<br>AGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAG<br>TTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGA<br>ACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGG<br>AAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAA<br>GTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGA<br>AATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGG<br>GCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGC<br>CAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGA<br>CAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGGTAAACATGGAAAGGAACAACCGGTACCAGCCGCTG<br>CAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAACGAGCAAAATCGCCAGCTAACATCATAATGACAGGATCAAATT<br>CACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTG<br>CTGTATTCAGGAAATCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCA<br>GGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAAC<br>AAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCA<br>CACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTG<br>CACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACC<br>ACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGAT<br>TAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATG<br>TTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACA<br>AGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGA<br>AATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTCGAAAGGATCAACAAA<br>ATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAG<br>AAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCC<br>AAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGA<br>CCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCC<br>CTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGA<br>TGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGC<br>TGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGTAGAAAAGGCCTTTG<br>ACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGC<br>CAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTG<br>GAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTG<br>TTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACA<br>AGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAA<br>CTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCAT<br>GGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGA<br>ATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTA<br>CCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAG<br>AAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAA<br>CTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAA<br>ACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAG<br>ACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAAT<br>TTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGG<br>GCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAA<br>TCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAGCAGGTGCTGGAGAGGATGCGGAGAAATAGGAAC<br>ACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCA<br>GCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCAGCACTATTCACAATAGCAA<br>AGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGA<br>GTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATA<br>GGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGG<br>AGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCT<br>AAAACTTAGAGTATAATAAAAAAAAA</font><font color="green"><u>AAGAATCTA</u></font>agttagaatgttttaaatcaaatttaaaatttcaaatcatatgtatatttaaatcattgtcatat<br>gcctgtgacaatgatttaaaatatgtttatatttatgtatttttttttgtcattctgtcagtggtttaagtgtcaaagttatttttcaccttgttataaa<br>aaacattgttaccttagagtgtatcaagagccttaaaaatgttcaacctgccaggtatggtggctcacacttgtaatcccattgcttttggaggctaagg<br>tggaaggattgcttgagcccaggagttcaagacctgcctggtcaaatattgaaacctggtctctacaaaatatttcaaaaattagccgggtgtggtgatg<br>catgcctatagtcctagctacttggg	UCSC	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	48/48	NA	NA	NA	intron:ODZ4:NM:001098816:29/34	
0	chr12	83479436	83479437	2000063	0	-	Druze73; RIP_L1_chr12_083_01	CATCTCCATATGTTAACAGA	AAACCTTGTAGAAGCATGAG	LINE	L1	Ta-1	cttcagtttgatctcgaggctaatatttaaacagactgaatgattaagagatgctcagcatcaagaatattaatttcctcaaactttggatattattgat<br>ctgtttaaatgttgactttccgttaaatatttctttcaaaatgtcttcaaaatacctttcctttattttgtgaaattacagatgttctaacatattccac<br>tttatttattctttcgctaaaccttgtagaagcatgagctatagcttataaaattattaatttccatggtaagtagaatgaaggtagaatttaattttaa<br>tgaagcctagtgtaacaaacattccactccagtgaaatcttacaaagtaccagctggaaaacagctgtgtcccatgctctttgactgttgtgaaatctta<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>ctacaaccaaataaaacagatgcatccttgaaagttttgatgaactttgtaaatcttcagatcaggtctttcatacttta<br>tattagttaaaaggcaaaaaagtttcattctatttggaagttcattagcttctctttgaggctctgccaagaattcagttctctgttaacatatggagat<br>gataccacatttgcctgtttgggtactagtgtcattccttcaatgtagataaccaaatacatcagcactgtttacatcaaaacacactctttattaaaat<br>gtataagcacaaatatataatcatacatcataaagaagcacaaattcagaaactaatgctttagttaatggaggttcctctttgttaaaaattcagatga<br>gtaattcaacagcctcaaaa	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/48	NA	NA	NA	intergenic	
0	chr6	32697490	32697491	2000064	0	+	Druze74; RIP_L1_chr6_032_01	TGGTAATTGGAGTTACCATC	GCAGTTCTGCAGTCATATTT	LINE	L1	Ta-1	agaatcacttaatagactgcagcagatctcccttgaccaaccccccgaaaccagtcaaattcttcattttccccaaagtgaggactcccacattaagaag<br>ccctcagtactgagataactagcagatacatttttccattgcaagggtggtcttgatgcagggccagcaaacctcaaaattggggctttgcccaagagtg<br>ttcttggcttcactagggaaagattccaaggatgagacagtggtgttagacagcaaattttatggaactaagctactccttgaagagcagggttacccca<br>tagacagtgtgcccagaatagtagctcagaggcagttctgcagtcatatttatacccacttttaattatatacaaattaagaggtggactatgcagaagt<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>ttctagaaatagggtagaaatttctgcataatccaccccttaatttatagatggtaactccaattaccacttcaatgacc<br>ccagtgggtcattattgccatggaaagaagtggtaacctctgggtgttgccatggcaatggtaaactgacatggcaaactggtaggcatgtcttatggag<br>aggtgcttctgccccatccctgttttagttaatttgatctggtgtctgagccccacctactacttcagtcttgtgacccccagattccccagttgataag<br>aagatgcgtgagtaaaggaggaaattgagagatgcttcctttcagtgtccaagtgtcaaaaaggattcctagtcttaattaaaatttagatataagaaat<br>ctactgaaagaaagtgatta	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/45	NA	NA	NA	intergenic	
0	chr5	151436624	151442640	2000065	0	+	L1HS446; Druze75; RIP_L1_chr5_151_01	ACAGCGTACAAGCTAAGTTA	CATCACATGTCATCTGAACA	LINE	L1	L1HS	acatccttgatgtaattctcttaacttagatagatgctattatgcctactttataggttaggaaaaagtaattcatttgtccaaagtcacacagctagta<br>aatcttggggtctggactgaaagcaattcttttccaaaaccattttctttttaaaatgtatacctaactgagttgtgggtatcacttctgtttcaggagc<br>aaggcatgagaagctctatctttgcaaataatttgctttggataaagctatttcttttgcagaagcatcacatgtcatctgaacatttaaaaaatatttt<br>ttgtgtctcttagaaattctcgtgacatttccatcatatagcctttagatagtgtggtcttcaaaattagatagtgtggtctt<font color="green"><u>CAAAATTACATGGTGGA<br></u></font><font color="red">GCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTACCAGGTTCATCTCACTAGGGAGTGCCAGACA<br>GTGGGCGCAGGCCAGTGTGTGCGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTC<br>CGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAG<br>ACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCCAGGCGGCAACGAGGCT<br>GGGGGAGGGGCGCCCGCCATAGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCC<br>TGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAATGTCCCTGTCTGACAGCTTTGAAGA<br>GAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCCCTGACCCCCGAGCAGCCTAATTGGG<br>AGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTCCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACC<br>AGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAA<br>CTGGAAACTCTAAAACGCAGAGTGCCTCTCCTCCTCCAAAGGAATGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCT<br>GAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAA<br>TGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGA<br>GCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAA<br>TGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGGGGAGAATGGAACCAAGTTGGAA<br>AACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCT<br>CGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCT<br>CAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAAT<br>TTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTACAGACAAGCAAATGATGAGAGATTTTGTCACCA<br>CCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCACTGCAAAATCATGCCAAAATGTAAAGACCATC<br>GAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATA<br>AATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCA<br>GAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAAC<br>AGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTAT<br>GCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTGAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCC<br>CACTGTCAACATTAGACAGATCAACAAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAG<br>AACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGC<br>AAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTA<br>CATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAATGAGAACAAAGACAC<br>CACATACCAGAATCTCTGTGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCCACAAGAGAAAGCAGGAAAGATCCAAAATTGAC<br>ACCCTAACATCACAATTAAAAGAACTAGAGAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGG<br>AAATAGAGACACAAAAAACCCTTCAAAAACTCAATGAATCCAGGAGCTGGTTTTTCGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAA<br>GAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTAC<br>AAACACCTCTACGCATATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTC<br>TGAATAGACCAATAACAGGATCTGAAATTGTGGCAATAATCAATAGCTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCAAATTCTACCA<br>GAGGTACAAGGAGGAGCTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGATGCCAGCATCATT<br>CTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAATATTGATGCAAAAAATCCTCAATAAAATACTGGCA<br>AACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATG<br>TAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAA<br>AACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAGACTG<br>GAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGG<br>AGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGC<br>CCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCCTATACACCAACAACAGACAA<br>ACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGAACCTCTTCA<br>AGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGATACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAAT<br>GGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATA<br>TGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTA<br>CAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCT<br>GATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAA<br>CTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAG<br>GCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAA<br>ACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGG<br>CTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAA<br>AAGAAGACATTTATGCAGCCAAAAAACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCAC<br>ACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAA<br>CTAGTTCAACCATTGTGGAAGTCAGTGTGGTGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAA<br>ATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAAC<br>AATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATG<br>AAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATG<br>GACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATT<br>AGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAA<br>AAAAAAAAAAAAAAAAAAA</font><font color="green"><u>CAAAATTACATGGTGGA</u></font>cacttacaacccttaggtgacttaaaagaaaagctttactgagatataatttacttataaaatt<br>catccactttaagtatgaaattcaatgattattattatattacagaattgtgcaactgtcacgtaaattgaattcctttggtaacttagtttgtacgctg<br>taacggatcaattatccaagaggatgagagaagtcattgcagatataaggaacgacatgaataaaggtgtcaggatggggacatagagatcatatgaaga<br>ggagtggatagtcctatttggctgggtataaaatgagtaaaaagagaaaaataaataatactagggctgggtaataacaatgaacagatcatttccagag<br>agctggtttggtgggaaga	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	56	6142	109	NA	intergenic	
0	chr5	68299434	68299435	2000066	0	+	Druze76; RIP_L1_chr5_068_01	TAATGTCCCTCTGTAACATT	AGCTACTATCATTATCGTGG	LINE	L1	Ta-1	aagtgctgggattacaagcgtgagccaccatgccccgccctgtctctaattttttaaaaaaaagaatatcaaaatgccagaatgccaggtattcatctgg<br>aattgttccatttataatgattattaacattaaaaagtactcttaagtccattaaaagttcatcatctcatttaatgtccctctgtaacattgatgttat<br>tgttcccattttacagataagaaagctgaggtcacaaaaaggaaagtgactggtccaagttgaaattgatcgtaattagcagagccagaagttgaaacca<br>gttctgttttattataaatccacaccacactttggatcacacatcatcagtggcccaaactctcagctcttgcaaataaaaataaatcaacagtttttag<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>tgtcaagtctctgtacaacatgtgctggtccacatttcatgccttggggctagttattgccttgtattaattattatctt<br>tcatgtagactttgcctcctaagtagtaactaaattgctaactctttatagtcaaaaatatgtgttttccatctttgtgccccacacttagaagagcttt<br>ttgcacatttaggtgatttttagatcaccacgataatgatagtagctttctgcctctctagactgcccaacaatctctggacaaatcaggcctctctgcc<br>tataaagatgtgatgcaggctggctgcagtggttcatgagtataatcccagcactttgggaggccaaggcagaaggatcagttggggctaggagttcaag<br>atcagcctgggcaacatagt	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/48	NA	NA	NA	intergenic	
0	chr3	189318164	189318165	2000067	0	+	Druze77; RIP_L1_chr3_189_01	TTTGTGTTAAACTAAACCTG	GCAGAGTACATTCAATCCAA	LINE	L1	Ta-1	ctccacccaagaaggaacctttcaaacctgtgagggagactggagctcttggaggactggggctctacgccaaggatgctcagcctctgcgtggagagga<br>caattttcaaggcatcttccaaccctgagatttcagtgatttgtgttaaactagacctgggaagggtgtttttgtaacttatatttttttattccctaaa<br>acgttcttcagaaaaagccttatcttccttccaatatttcattagcgttcactttcctgtgtttctctgattgttgccctccaggtaaattttgtgctaa<br>atatatgtgacctggctagtgacttggttgtattttttttatttgtttgtttgttttgagacaaagtctcccagactggagtgcagtggcgtgatcttgg<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>ctcactgcaacttccgcctcccaggttcaagcgattctcctgcctcagcctctggaatagatgggattacgggtgcatat<br>caccacgcccagctaattttgtatttttagtaaagacggggttttgccatgttggccaggctggtctcgacctcctgacctcaggtgatccgcccgcctt<br>ggcctcccaaagcgctgggatcacaggcatgagccacctcacccagctgccttggttgtatttggattgaatgtactctgcgcgtatgtctattcagtgc<br>tccaaacagggctaagtgtttaaataatcatacatagtcactcacattcttggagttttattatagccttattacgtatccatgtttaatagtttaatag<br>tttagtaattatttaataat	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/48	NA	NA	NA	intergenic	
0	chr4	112848364	112848365	2000068	0	+	Druze78; RIP_L1_chr4_112_01	TGTAAGTTATTTTGAGTCTC	TTCAACAAAGTCTGTCATGC	LINE	L1	Ta-1	aatttagaattgttgatttttctcttaactatcctatgtcatagcatcatggtggtaaaacaccaccatcaaactaaaaatcatatacactgcttaaata<br>cttataaactagaaaatatatcataggaaaaatgtgaccactaaattgtttgttgaataacatgcctataaaaagaaaataatttagatttaagctgata<br>gttacatagagtaaaagaaatatttggatgtcctttgagattattcatttcaacaaagtctgtcatgcccaataagtaccaaatgacagtgtgggaacat<br>gtgaaactgaaactggactgttaaagaaatcttagcagaaatatggaaaatcagaatatgaaatgtacaaaccccagctaagtcatagactatcattttc<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>attatctgtcacctgacagcagattatctactcctaaactgtgtttaaagtatctcataaacttaaatgatgttaagggc<br>aaatgtttatattaaagtatccataaaaagaactaaatttgtaaaaatgagactcaaaataacttacataattttaatacaaatcatttaaaattgaatt<br>ttgcttagagaagagttttctaaaaaggaataatgaaaaactgtatttatttatgttttttaattattaatttttttttttttgagacagagtccactct<br>gttgcccaggctggagtgcagtggtgcaatctcggttcactgcaacctctgcctgccaggttcaagtgattctcgtacctcagtctcctgagtggcaggg<br>actagaggtgcccaccacca	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/48	NA	NA	NA	intergenic	
0	chr8	5816858	5816859	2000069	0	+	Druze79; RIP_L1_chr8_005_01	CAAAATCTCTTAAAACAACC	ATTGGTCTGAAGTGATGTCA	LINE	L1	Ta-1	aagtatccagacatggtggcaggtcctgtaatcctggctacttgggaggctgaggcaggagaattgcttgaatccatgaggtggaggttgcagtgagcca<br>agattgtgccactgcactccaacctgggcgacatggagtgagactccatctcaaaaaacaaacaagaaagcaagaaagaaaacaaaagaaataacttcaa<br>aatctcttaaaacaaccttaccacctgttttctagtcttaatcttccattctgcagattggcagtactttatgtctatctgctgactgagattatagaat<br>tcctcacacatggctcctgggcgcttgctaaacttgtagttactgaaactccttttcagatttgaaggcgtccctgaacgtggacttctttggcttcatt<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>ctccccgacctgtgttatattttacaaaaacacctcgagactggctcacccaattgcctctgtgagcgcccctaggaact<br>tgttttgaggctgaatacactccatctatgaccgctctgtttcccggcccttggccaatatagacccaatgtcctcaggttctttcccttctgcgagctg<br>ggtgacatcacttcagaccaatgccctattgtatgttagaaccaaaaagcgtttacatttccattcaagccctcatttctacacggaatttttggtagtc<br>ctcacaaactgctgtcctcctgcttttgtccatctcagtaaatggcagcagtatctaccacattgctgaggatgcaaacctagatatttccctcaattct<br>tcctttataaaaattcctac	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/50	NA	NA	NA	intergenic	
0	chr6	142491804	142491805	2000070	0	-	Druze81; RIP_L1_chr6_142_01	TTTGGTAACTTGTTGCAAAC	AAGAGTCACTACTTCCTTGA	LINE	L1	L1HS	gaggcaccaatacaagggtgtttgctcaaatttgcttgaagtttttagtttcagataaaggagggaaggcgagctcagatttactactactactattagt<br>acaaaaagttgctaacatttattaatcactactatatgccagtactattctaaaccctgggagtaatgtataatcttttggtagacattcttggtgtcct<br>aaaacttctttctgagattaaaaacatttaagaccttgtggtgtaaacaagaaacagggtaaattttgttcagaacccaaaataggatcaaaataaataa<br>aaatgagttaaagcattatgcatgatgattaacacatgcaaattaatgcataaatgttatatattattacattcacatctggtctaattt<font color="green"><u>AATAGTTTGC<br></u></font><font color="red">GAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGGGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCAT<br>CTCACTAGGGAGCGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAG<br>GGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTT<br>AAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAGTCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAAC<br>TGCAAGGCGGCAGCGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAGCCCACC<br>ACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGACTCCACCTCTGGGGGCAGGGCACAGACAGACAAAAAGGCAGCAGTAACCTCTGCAGACTTAAATGTCC<br>CTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACAGGCAGACTGCCTCCTCAAGTGGGTCCCTGACTCCTGAC<br>CCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGT<br>TAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACTCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGG<br>GAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATG<br>GAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACT<br>TTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGA<br>AGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGA<br>GAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGG<br>AGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAATGCAGGCCAACGTTCAGATTCAGGAAATACAGAG<br>AATGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGA<br>GAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCA<br>ACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGCAAAT<br>GCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCAT<br>GCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGGAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAA<br>CAATACTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCA<br>GGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCA<br>ATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGC<br>TAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTGAGTGACCTACAAAGAGACTTAGACTCCCACACATTAAT<br>AATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCA<br>GACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACACACTTG<br>GAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACACAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCT<br>CACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGACATAAAGATGTTCTTTGAA<br>ACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGC<br>AGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAA<br>AATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGA<br>CCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAA<br>CTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAA<br>CCAGGAAGAAGTTGAATCTCTGAATAGACGAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGA<br>TTCACAGCCGAATTCTACCAGAGGTACATGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCAT<br>TTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAAT<br>CCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAAT<br>ATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAACCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTC<br>AACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCAT<br>ACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTG<br>GCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAG<br>AAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGCATAAAAATCACAAGCATTCTT<br>ATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGG<br>GATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAA<br>GAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAA<br>AACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTC<br>AAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGCTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAACGC<br>CGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGC<br>CATATGTAGAAAGCTGAAACTGGATTCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAA<br>ACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGTGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTG<br>ACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAAC<br>CTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAGACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGAC<br>ATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCA<br>CTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACA<br>CTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCA<br>TTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGA<br>ACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATC<br>CTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAAT<br>TGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTGGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACC<br>TAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAG<br>AGTATAATAAAAAAAAAAAAAAAA</font><font color="green"><u>AATAGTTTGC</u></font>aacaagttaccaaacattcaaagaagaatgaatactgattcctcttaagctcttctgaaaaattga<br>agaggaacactgccaaactcaatttatgaagccattttcaccctgttgccagagtcagacaaaaacaccacaagaaaactacagggcaacatcccagaag<br>agtacagatgcaaaaaccctccataaaatactagcaaaccaaattcagcaacatagatagaagaataatacaccagtgggatttatctctgagatgcaag<br>gattgcttaatacattgcaaatcagtaaatgtgatataccaacttaacaaaatgaaagacaaaaaccacatgatcatttcaatagatgcagaaagatcat<br>ttgacaaaattcaaaatcaattcc	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	48/48	NA	NA	NA	intergenic	
0	chr4	58612465	58612466	2000071	0	+	Druze63; RIP_L1_chr4_058_01	CTAGCTTTATTCAAACTCTG	TTGCATGTCTATTTCTCCTG	LINE	L1	Ta-1	caagcagaggataatgctataaatgctatatgaaataattattttgaaatgaatcagtctgggagctttttttgatagagttaggataatttttaaaaat<br>cgcttatgatgacattaacatctagctttattcaaactctgttaaaataaaatctttgaacctaattctcattattatctcccatacctatgtttgattt<br>caatgattgctgctttattcttaatgaaagcaaagtttatggctagtgcatgattgaaatttaaaaataaataagctaaaacagacaaacaaacaaaacg<br>tagagctgtggctgggcacagtggcctcacacttgtaatcccagcactttgagagggcgaggtgggtggatcatgaggtcaggagatcaagaccaccagg<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>ccaacacggggaaaacccctctctactaaaaatccgaaataattagctgggtgtggtggtgtgcgcctgtagttccagat<br>actctggaggctgaagcaggagaatcgctggaacccaggaggtggaggttgcagtgagccaaggtcttgccactgcactccagcctggtgacacagcaag<br>actccgtctcaaaaaacaaaacaaaaaaatttgagctttgacttctctttttgttttactctgtatctccctgaaaaatcaggagaaatagacatgcaag<br>agattcttcttattcttttccttttggaagaagcttgtcatggggtgtagctttcctgaaattaatgtaactagtcattctgaaaatggtttaatttccc<br>attgtctgggctggcaaaaa	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/48	NA	NA	NA	intergenic	
0	chr4	58582044	58583094	2000072	0	+	Druze82; RIP_L1_chr4_058_02	ATTTCTCAGCATCCTCTGCT	TGGAAGTCAACGTAAACTAG	LINE	L1	Ta-1	ttgggcaaaatagttgcctgattgaaagcaaccaatagagacatctatagaacctcaggtatatagccaatcctgggcttggttccccgtagtttggagg<br>atataaaaacaaacattatatctgttttcctgaatcaataatttttaatcaagtttatagaaacaatactttcacgtgtgtcggacaaagggtaatgaac<br>tgtattctgtaaataggcactttattgttagacataatggaaattgctagattggtggaagtcaacgtaaactagaatagtctagtaaatcttttgaaaa<br>tggagtagggcatagataatcaggaaaaggagacaagtaatgcagtaaaactaaggcatagcatatgaaagcacacaaataatactaaaacctgac<font color="green"><u>AAAT<br></u></font><font color="red">GGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTC<br>ATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAAC<br>AGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACAATGA<br>GATACCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTG<br>GTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTG<br>GGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAAC<br>CCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGATCATATCCTTTGT<br>AGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACA<br>ATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCACTGGGAGATATACCTAATGC<br>TAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATA<br>ATAAAAACAAAACAAAACAAAACAAAACAAAAAAAAAAAAAAAAAAAAAGA</font><font color="green"><u>AAAT</u></font>ctctcagatttgtttgtggtcagcagaggatgctgagaaatggtc<br>tctcccctaaccaagtctagtgaaattggtgttttgtgtgcttgtttgtttttcttttaccatttaatatcttcctgtctcataaatagtatccaggttt<br>tgataaagaactatcacccatgggcattaaggcaaaccaagtaaacatttataaggagcagttagttcttttcttcctggccttgattttatttactcaa<br>ttaattatttaatcgtaacaaggaacatagtctccctgtgctctcttcatccctttgcagtaatcagcagtgaagggaggcaatgcagtaaatgggctct<br>gtacggaaggataagagaatcatgaataatggttgtttttagtaccatgaa	UCSC	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	48/48	NA	NA	NA	intergenic	
0	chr6	46418161	46418162	2000073	0	+	Druze83; RIP_L1_chr6_046_01	GCTATGTTCTATATGTAGGT	TGAGACATCTGGTATAGAAG	LINE	L1	Ta-1	gaaatcacattcctctttgactgagatatgtcttttgagtgtagtgttagagtgtcaagagtagagaaacaagaacctggctatgaaagactggctctag<br>gctcaaggaaaagggacaaagacttttaggttactttcaaagtcaaccagccctggaataggaataagtaaggaaaaagagtatcagggcaaatgctcta<br>ttaaagaatagttattgtgcatttggctggagttttctttgtgctgtgtctctgagacatctggtatagaaggtgaagtggagaaagatgtagaatgcca<br>gtggtggaaacataaatcaccttatcaagaaggaagttttagccaggactggtggctcatgcctgtagtcccagctactcaggaggttgaggtgagagga<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>tcacttgaatccagtagtccaaggctgcagtgagctatgattgtgtcactatactccagcctgagtgatagggtgagacc<br>ctgtctcttaaaaaaagaaagaaagaaagaataagccagaagaacacgacctacatatagaacatagcttttctttcaaacccagagatctgatgaaagg<br>aaagcctaaatgaaccaaattccataaagcggtaagcccttcccatgggagcaaaagtacatgtttgctttcatccttggtgtagttgtgggagaaagaa<br>tttgccatagagaggcataaggagaaaccagatgaactcacagaaaacttttatggtttgatgtgggctagaataatggatcagaatcccaaagagtcac<br>agccaaagagtaagtctgta	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/48	NA	NA	NA	intergenic	
0	chr6	133383528	133389578	2000074	0	-	Druze84; RIP_L1_chr6_133_01;AC208158	TTCAGTAAGTTTGCACATAG;NA	TTTGCTACACTATACCTTTG;NA	LINE	L1	L1HS	ataaagaaagaatcaaatggaaaatgtggaatttaaatgacatttatcaagattagaaaatcagtgcataggtataacagcagatttgacctagcaaaag<br>atgaattggtagctgtaaaataagaaaaataaaatatatagaataggaaagagaaaaggagagaggtagagggagaaaagagaaggagaacacagaaaag<br>gtgatacaagatttacaggaaagattaagaattctaatgtattagtatttaaaacatcacaatagaggaaaagagagcaaaagaaatatttgaagagatc<br>attgttgagaactttcaaaaactgatgaaagatattaaactacagattcaagaatgctcacaaactccaagcaatttttttttctt<font color="green"><u>AAAACATCACACCT<br></u></font><font color="red">GAAGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTA<br>CCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGG<br>GAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTC<br>AGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCT<br>GAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACAGGGT<br>GGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGAC<br>TTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCT<br>GACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGG<br>TCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCA<br>CAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACA<br>AAGCTGGATGGAGAACGACTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCGAAGGCAAAGAA<br>GTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAG<br>AACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGG<br>GAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAA<br>AGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGG<br>AAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAG<br>GGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGTGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGG<br>CCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAG<br>ACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCT<br>GCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAAT<br>TCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGT<br>GCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGC<br>AGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAA<br>CAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCC<br>ACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCT<br>GCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGAC<br>CACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGA<br>TTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGAT<br>GTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTAC<br>AAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAG<br>AAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAA<br>AATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACA<br>GAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCC<br>CAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATCGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGG<br>ACCAGATGGATTCACAGCCAAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTC<br>CCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTG<br>ATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCTCTGGGATGCAAGG<br>CTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTT<br>GACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAG<br>CCAATATCATACTGAATAGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTT<br>GGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATT<br>GTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCAC<br>AAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCA<br>ACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCA<br>TGGGTAGGAAGAATCAGTATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGCCTTTCTTCACAG<br>AATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACT<br>ACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCA<br>GAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAA<br>ACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAA<br>AACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAA<br>GACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAA<br>TTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTG<br>GGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAA<br>ATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAA<br>CACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCC<br>AGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCA<br>AAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAGGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATG<br>AGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCAT<br>AGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGATAGCATTGGG<br>AGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCCCCAGCATGGCACATGTATACATATGTAATTAACCTGCACAATGTGCACATGTACCCT<br>AAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AAAACATCACACCT</u></font>atgtgcaaacttactgaataaatgagacagaagga<br>tagaatacaaatcttaaaagtagcaagaaaaataagacagttatcttcaaagccacaaaaggtacacagagagctgtcttctcaacaggcaaaaaaataa<br>aagcaagagaatggagtaatatatctataagtctgaggaaaaaacctgctaaggtacaaattttatacccaataaaaatatacttgaagaaggaaggaga<br>agtaagtatttttcagacaaacagaaatcgagagaattacttttctaaacacttgcactaaaggatagtcatcaagcatgaggaaaataagttcagatgg<br>aaggttgggatgcatggagaaatggagagcaatgaaaagggaaagtatatt	UCSC;UCSC	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R,Wilson RK, Eichler EE. A human genome structural variation sequencing resource reveals insights intomutational mechanisms. Cell. 2010 Nov 24;143(5):837-47.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=21111241">PMID:21111241</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR;E: fosmid-end sequencing	NA;NA	48/48;NA	NA;NA	NA;NA	NA;NA	intergenic;intergenic	
0	chr11	67355597	67355598	2000075	0	-	Druze85; RIP_L1_chr11_067_01	TTCAGTCAACCCAGTTCTAT	AGAGTGAGGTCCTGTCTCAA	LINE	L1	Ta-1	agcctaggagttcaagagcaggcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagctgggcttggtggtacatgccctgtagtc<br>ccagcttctggggaggctgaggcagaagaattgctggaacccaggaggcagaggttgcagtgagctgagatcatgccactgcactccagcagcctgggca<br>acagagcaaggcccagtctgaaaaaaaaacaaagacaaaactaaaccaaaaaaaaaccaaaaaacaaaaaacgcacacacacacaaaaacaaaggtagac<br>tccaataggaaaaattcactcaaaagcaattcaaataattattcagtcaacccagttctatctcagttctttattatatatataaacttattctgtccag<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>atgccctagttttctttttcttatcttttttgttttcttttgagacaggacctcactctgtcacccaggctggagtatag<br>tggcacaatcatggctcactgcagcctcaacctcctgggctgaagtagttctcccacctcagcctcccaagtaactgggactacaggtgcatgccaccat<br>gctcagcaactttttgtattttttgtagaaacggggtctcactatgtgggccaggctggtcttgaactcctggactcaagaagtccacctgcctcaacct<br>cccaaagtgccaagattacaagcatgagccactgcatctggttgattccatagttttctttttctctttgcccattgcctggattccataagcagaagga<br>aaacccaggggctgactttg	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/45	NA	NA	NA	intergenic	
0	chr5	2021411	2024378	2000076	0	+	L1HS426; Druze86; 31075; RIP_L1_chr5_002_01	CACATCATTTGCCTAAATGC	TGAATTGTCATGATGCTGTT	LINE	L1	L1HS	ctgagcctgcctttcccggtcttttggtgctggctgtggtgctgtgagagatgatgaagtttgtaagtcagggcagtttttaaacccacagacaagaagc<br>acatctgcaaaatgcagcctgggagctgtctactctgcccggaacagtggggatctctgcaggaggaaatcgcatagtttcccacgggtgaattgtcatg<br>atgctgttgtggctgttggcaggaagcttcctcacattttcagtttaaatgcattcctcctgatctttccaaaagacggaggcagaacagctggttgcca<br>tactccgcataaagtcctttgggtaaattgaaggtaaattttatcccttaaattctgctccatggggtcacagccttgggtccttaaa<font color="green"><u>TAAAGAAAATTG<br></u></font><font color="red">TGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCT<br>TTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTG<br>CTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTA<br>GTGCTATAAATTTCCCTCTACACACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGA<br>TACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATCGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAAT<br>AGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCC<br>AATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTT<br>TAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAA<br>GTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTA<br>TCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAAT<br>AAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTC<br>TCACCGCTCCTATTCAACATAGTGTTGGAAGTTCCGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAAT<br>TGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATTGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGG<br>ATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCA<br>AAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAA<br>ACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCAT<br>CAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAA<br>AAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAG<br>ATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTC<br>CCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGG<br>ATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCTA<br>AAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAA<br>CAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAA<br>AAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCAT<br>CATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCATTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTG<br>CTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGAT<br>CTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGT<br>TTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGA<br>ATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAA<br>ACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTC<br>GGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACT<br>AACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT</font><font color="green"><u>TAAAGAAATTTG</u></font>ggggttttttc<br>ccctataaaagcaaaacaatccggcaactgcaccatggatgaagcatttaggcaaatgatgtgatttggataccaaagggaatctgaggcccggcgcagt<br>ggcttatgcctgtaatcccagcactttggaaggtcaaggcaggcaaatcacttgaggtcagcagtttgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnn<br>nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngaattcagttcaccggctgctcgtgtgagaa<br>tcatactgagcacccacagaaaagcctgctgtggacagtgccgtacagttcacaaaggcgccgcaaactatgagctc	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Bennett EA, Coleman LE, Tsui C, Pittard WS, Devine SE. Natural genetic variation caused by transposable elements in humans. Genetics. 2004 Oct;168(2):933-51.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15514065">PMID:15514065</a>.</LI></UL>	C:Reference; E:Insertion-specific detection:PCR	NA	60	3394	204	NA	intergenic	
0	chr18	50206967	50210957	2000077	0	+	Druze89; 237810; L1HS552; RIP_L1_chr18_050_01;AC203632;AC209537	ATGCTTCCTCTTCATGCTTT;NA;NA	TATCTGTACATGCATACCTA;NA;NA	LINE	L1	L1HS	gaggtggccacttccatgatgtactttaggaacaggacaacctgtccctgcccttgactatttgtttatctagctattcatttactaaacatttaaaagc<br>aatgactataagtgaagcattatgttagatgttagggatataaaattgactgttaaatgatctttgccctgaaatagctttcagccgattgaaagacaca<br>gtaaaaacagtgatactttgtaatagtgctatgattagtatacattgtaataagtgatatatatgtatatacacacatacaaaggatatatctgtacatg<br>catacctaaatgagacaccacacccagctatggggtgtgaggtagacggtgtcaagaagttttcctggagtctctctgaatgaagattaagagtt<font color="green"><u>AGCCA<br></u></font><font color="red">GTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTGAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGG<br>TGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAG<br>TCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGT<br>CTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGTCAACATTAGACA<br>GATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGTACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATC<br>AACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAA<br>ATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACC<br>TGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTG<br>GGACACATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTA<br>AAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAA<br>CCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAA<br>TCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTATGCAAAT<br>AAACTAGAAAATCTAGAAGAAATGGATACATTCCTTGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAG<br>GCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAGCT<br>GGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCAGGC<br>AGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACA<br>TCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAG<br>AGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGT<br>ATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAA<br>CGGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTAT<br>TCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAGCCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTG<br>ATAAGCAACTTCAGGAAAGTGTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGG<br>GTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACT<br>GCTCAAGGAAATAAAAGAGGACACAAACAATTGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTA<br>ATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCC<br>GCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGACTACAGTAACCAAAACAGCATG<br>GTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAG<br>AAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACAC<br>CTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACAT<br>AGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACA<br>GCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACA<br>ATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGC<br>CAAAAAACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAGATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATC<br>ATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGA<br>AGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTG<br>CTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAG<br>AAAACGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTC<br>TCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATAT<br>CACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAG<br>CATGGCACATGTATACATATGTAACTAACCTGCACAATATGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAG</font><font color="green"><u>AGCCA</u></font>aagc<br>atgaagaggaagcatgtgtgtgaaggctgctccacggtgaaggttgaaggagccaatcatggcaggcatggaattgtgagaaagcagttcactgtggctg<br>taaaggagaggcccagtggtgagaggtgagggtggaggagaagggaggaatcaggttggaaaagacctgttatcccttagatccaccttattgtgaattt<br>agcttattctccttttctgggagagctagacaatctgagagcctggcagcaatgggaagtttgtggtggcattggtgttttaaagagattttgtagcgaa<br>tgttcacaatccaggaggaggagtgtagctgagaaatacagtgaaaagcacagggcaatgggtatacggaagaggatgtccacatagaaaa	UCSC;UCSC;UCSC	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Bennett EA, Coleman LE, Tsui C, Pittard WS, Devine SE. Natural genetic variation caused by transposable elements in humans. Genetics. 2004 Oct;168(2):933-51.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15514065">PMID:15514065</a>.</LI><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R,Wilson RK, Eichler EE. A human genome structural variation sequencing resource reveals insights intomutational mechanisms. Cell. 2010 Nov 24;143(5):837-47.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=21111241">PMID:21111241</a>.</LI><LI>Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R,Wilson RK, Eichler EE. A human genome structural variation sequencing resource reveals insights intomutational mechanisms. Cell. 2010 Nov 24;143(5):837-47.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=21111241">PMID:21111241</a>.</LI></UL>	C:Reference; E:Insertion-specific detection:PCR;E: fosmid-end sequencing;E: fosmid-end sequencing	NA;NA;NA	48/48;NA;NA	NA;NA;NA	NA;NA;NA	NA;NA;NA	intergenic;intergenic;intergenic	
0	chr5	147318215	147320721	2000078	0	-	Druze92; RIP_L1_chr5_147_01	TCTGACACTTCTTACTTATG	TCTACTGCAATCGAGAAAC	LINE	L1	L1HS	gatcagatgataatgcaggttgcccaaggtaggcatggctggagcatttgtgtgctgcagtctttggtagcctggattttattccaagtatgaggaaaaa<br>ccattagaatgacttaaatatgttaaaatgtggttaccatatttacaaaataccttattctgagaaattcaggtctcagaaggcactctcatattgtccc<br>tctactgcaatcgagaaacctgaggctgattcatcttctgctaggtgtatgtggcggatgataacaagccattcaccagcctagagggaccaacctataa<br>gggtctacagcttagggaccttaagaacaggaaattaccaattgggagaaactttaatgaggacaggcaatcttttgggacactttaaa<font color="green"><u>ACCAGCCTGGA<br></u></font><font color="red">GTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTT<br>CCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTC<br>TTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGT<br>CCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTG<br>TCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAA<br>GCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCA<br>TTCTTATACACCAACAAGAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTA<br>CAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGT<br>AGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTG<br>GAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTG<br>ACTTCAAACTATACTACAAGGCTACAGTAATCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAAT<br>AATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGG<br>CTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCA<br>TAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTAGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAGAAGACAA<br>AATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTC<br>GCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAACAAAAAAACAAACAACCCCATCAAAAAGTGGGCGA<br>AGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAA<br>AACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTT<br>TTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGTGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCA<br>TCCCACTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGAC<br>TTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTC<br>ATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACTGCATATTCTCACTCATAGGTG<br>GGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGAT<br>ATACCTAATGCAAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAA<br>CTTAGAGTATAATAAAAAAAAAAAAAAAGAAAAAAAAAAGAAAAAAAAAATAAAAACAGTAACAATATAAAAAACAAACAAAAACAAACAAACAAAAAAA<br>AAAAAAC</font><font color="green"><u>ACCAGCCTGGA</u></font>aacaaggtagccaagactttatcctttatctcatctgatcttcacaacaaccaggtcaagtggaccaagctgaagttatcat<br>ttcccataagtaagaagtgtcagattccataaagaaaattaatttatgtttaacagagccatgggcaaagattatttcacctattttgctgactgagaaa<br>ggaattatgaaaatttgcctgattttacatgcatttgtcacagctggactagcactaaagtatagatgcccggattctcgctgtctccgcggtgtcactg<br>tctccttgtgacattcagggaatggggaaattttgtaactttcatcaagtcagctaaggagcaacccagccagcttcccacaaactacttaaggcattca<br>gcccaca	UCSC	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	48/48	NA	NA	NA	intergenic	
0	chr4	83148338	83150415	2000079	0	+	L1HS427; Druze94; RIP_L1_chr4_083_01	AATATTCAGCCTTCTGACAT	GCACATTCCAATTTGTAGTG	LINE	L1	L1HS	tctgcacattccaatttgtagtgcaaaacgttctcagtaagggagggctgaaggggctggaggagcgtggctcttataaaatctcaaaattgaggaacaa<br>aagcttccttccaggacaaaacccatggagaaactgctgggtgtggatgccaacttgaccaggacgggagtaacagggataaaatagagattgagagaga<br>agactcagattaaaaattgcaaatggaagtccaaataaatacagttaatttagtcaaagttgtctagtcaattcagcatgaccattaagatgaacacagt<br>tatccaaagctaatgctttttccatttttattaagatgtttgttaccatacgggcaaagactgagagtactaaataaaataaagctt<font color="green"><u>AAGAAATAAATGA<br></u></font><font color="red">TGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATT<br>CAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGA<br>TAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCCATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCGTGGG<br>TGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTG<br>CTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAA<br>TTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCG<br>CATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCCAACTATACTACAAGGCTACAGTAACCAAAACAGCATGG<br>TACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGA<br>AAAACAAGAAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCCTACACC<br>TTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATA<br>GGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAG<br>CAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAAAATGGGAGAAAATTTTCCCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAA<br>TGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCC<br>AAAAAACACGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATTATT<br>AAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGT<br>CAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTA<br>TAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAA<br>ATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCA<br>GTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCAC<br>ACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCAT<br>GGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAA</font><font color="green"><u>AAGAAATAAATGA</u></font>atagaagaa<br>tattatactcaaatatagttttttcagttataagattctatgagaaaaacaaatagtttgatgtcagaaggctgaatattacaattttttttactttatt<br>aaaacattgagtttatttcacatgtacatttttgtctccctgccatttccatgtctggccactgcaactactatatcctagcacacatttcatacatatt<br>taaaaccaagcagagggtggagatccatctttaaaaaccaaataggcattttggaaaacacattcttagcagtggaacctggacatttatcaaacatggt<br>agggaaagttctcactctgtgttatcaaacagacatctagatatcaactgttatagaaatgaaataagatgggaaatt	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	57	2230	139	NA	intergenic	
0	chrX	11635288	11641320	2000080	0	+	L1HS24; AC004554; Druze96; RIP_L1_chrX_011_01;AC208301	TTTATGTTCTATTAACCAGA;NA	TGTCCAGGTAATATTGTTGA;NA	LINE	L1	L1HS	gatgtacatgtgagttgtgtgtgtattctttatccactgacatttcaaaattctatttaattatatcttcatattttaaaaatcagatgattcaggggac<br>tgattcgataagttgtcttacttccactagtggaataccatgcaactgcaaatccaaggactaagaagttctcttaagttccaatgtgggaagatgtcca<br>ggtaatattgttgagtgaaaaatccaaggcactgaacaatgtgtgtgtatatttatatatatagaacaccaccttttgtaaagaaaaggtggaaaataag<br>aataaatattcataggagtaaaacttcttgaggaataatgtttcgtgtattttgccttttgaaccaagtaaatcaaagaactattc<font color="green"><u>AAAAATAACAATAA<br></u></font><font color="red">GGGGGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGG<br>TACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCGAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCT<br>GGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTT<br>TCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGT<br>CTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGG<br>GTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAG<br>ACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCC<br>CTGACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAG<br>GGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAAC<br>CACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACACAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAA<br>CAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAG<br>AAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCG<br>AGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAA<br>GGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTG<br>AAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCA<br>GGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTA<br>AGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGG<br>GGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTAT<br>AGACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCAGTACCAGCCG<br>CTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAA<br>ATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGT<br>GTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAG<br>GCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTC<br>AACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTC<br>CCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCT<br>CTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTG<br>ACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAG<br>GATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAG<br>ATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCT<br>ACCAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCA<br>AGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAAC<br>AAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCA<br>CAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTGGAAGAAATGGATACATTCCTCGACACATACACTCT<br>CCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATCGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCA<br>GGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCC<br>TCCCTAACTCATTTTATGAGACCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACAT<br>TGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAA<br>GGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCT<br>TTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCAC<br>AGCCAATATCATACTGAATGGACAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTG<br>TTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGA<br>TTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATC<br>ACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATC<br>CAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCT<br>CATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCAC<br>AGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACA<br>CTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCT<br>CAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTGTTTAATAAATGGTGCTGGGA<br>AAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCT<br>AAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAA<br>AAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAA<br>AATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAG<br>TGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGC<br>AAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGG<br>AACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGAC<br>CCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAG<br>CAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGA<br>TGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTC<br>ATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATT<br>GGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTAC<br>CCTAAAACTTAGAGTATAATAAAAAAAAAAAAA</font><font color="green"><u>AAAAATAACAATAA</u></font>aatgagataaaatctactaaaaatcaagtgaaacaagtttttgatctggttaa<br>tagaacataaaatgataattaaaacattagctaaaattatgattcaaattcaaattcagggatttttattatgctcacaaagttgtgcaaccgtcacaca<br>aattccagaactttttcatcacctccaaaagaagccctgtgctcattagcaatcactctccattcccctttcccccaatccactatttaattttttgaaa<br>aacaagttataaaacactcaagcacaacataaattccaagcaaaactcaaaactggtttctaaacagcactcattatagtagcacctgtgaccaatatct<br>ccaagaagttgggttagggaaagaaaactgtca	UCSC;UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Brouha B, Schustak J, Badge RM, Lutz-Prigge S, Farley AH, Moran JV, Kazazian HHJr. Hot L1s account for the bulk of retrotransposition in the human population. Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5280-5. Epub 2003 Apr 7.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12682288">PMID:12682288</a>.</LI><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R,Wilson RK, Eichler EE. A human genome structural variation sequencing resource reveals insights intomutational mechanisms. Cell. 2010 Nov 24;143(5):837-47.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=21111241">PMID:21111241</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR;E: fosmid-end sequencing	NA;NA	59;NA	6148;NA	101;NA	NA;NA	intergenic;intergenic	
0	chrX	11863121	11869356	2000081	0	-	L1HS28; AC002980; Druze97; RIP_L1_chrX_011_02;AC206602	TTTGTGACACTGGATTTCTA;NA	GAGTAGAATGCTTCTGTATT;NA	LINE	L1	L1HS	aaactatgggataaatctagacgcttgcttgaagccgaccggatttcttcaaactttgaacactggatttattccaactaaggtactgctctctttaagc<br>ttttaagtacttgaggctgaagtatttcttaaacacattttagaataagccactgtatattggagctgtttttcctctccaagagggagtgatgtgtaca<br>aagcacctacagatataaagtggcatacggctaactgtgggagaggaagagtagaatgcttctgtattttatcaagtgctgggggctgtggagaatgcaa<br>ttgtaagcaaataccagaatgacctataggtaaacatatgggatttctcataataatcacctcttaaacctcccaacaatactgtt<font color="green"><u>AAAAAAAATCACCA<br></u></font><font color="red">GGGAGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGG<br>TACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCT<br>GGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTT<br>TCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGT<br>CTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGG<br>GTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAG<br>ACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCC<br>CTGACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAG<br>GGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAAC<br>CACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAA<br>CAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAG<br>AAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCG<br>AGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAA<br>GGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTG<br>AAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCA<br>GGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTA<br>AGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGG<br>GGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTAT<br>AGACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCG<br>CTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAA<br>ATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGT<br>GTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAG<br>GCAGGGGTTGCAATCCTAGTCTCTGACAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTC<br>AACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTCACCTACAAAGAGACTTAGACTC<br>CCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCT<br>CTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTG<br>ACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAG<br>GATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAG<br>ATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCT<br>ACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCA<br>AGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAAC<br>AAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCA<br>CAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCT<br>CCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATCGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCA<br>GGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCC<br>TCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACAT<br>TGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAA<br>GGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCT<br>TTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGATGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCAC<br>AGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTG<br>TTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGA<br>TTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATC<br>ACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATC<br>CAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAATAAATGGAAGAACATTCCATGCT<br>CATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCAC<br>AGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACA<br>CTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACAAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCT<br>CAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGA<br>AAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAATGTTAAACCT<br>AAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGCACTTCATGTCCAAAACACCAAAAGCAATGGCAACAA<br>AAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAA<br>AATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAG<br>TGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGC<br>AAATCAAAACCACTATGAGATATCATCTCACACCGGTTAGAATGGCAATCATTAAGAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGG<br>AACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGAC<br>CCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAG<br>CAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGA<br>TGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTC<br>ATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATT<br>GGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACAAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTAC<br>CCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAACACATTAAAAAAAAAAAAAACAACAAAACAAAGCAAACATGGAAATGTTTGTT<br>ATTTTAATTGTTATGATGGTTTCATGGCTGTTTGCATGTGTCAAAACTCATCAAATTTGTGTACGTTAAATATGTGAAACTTATTGTATGCTGGTTACAC<br>CTCAATAAAGCTGTTAAATTTAAAAAAAAAAAAAAA</font><font color="green"><u>AAAAAAAATCACCA</u></font>atagttgctgctagaaatccagtgtcacaaaaggccaaagtttattgaca<br>aattggtgtatatgaaagacctcgaccttcaacattcacaagaaaagatcaattgcatgtaatttgtcttgcccgtaattttgctgttcacataatatgg<br>tgaagatccctcttacgctacaaacaaattaaattaaacaacaacaacaaaacgatcttgtcttgaatagcaattgctatgaacttcaaggacatcattc<br>attccttcatcattcaatctataaatatttactgactgtctgccatgtgtcagaccctgttctaggccttgggaatagagcagtgggagagatagacatt<br>gttcataacttcaaagagtttataatctcaaaggaa	UCSC;UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Brouha B, Schustak J, Badge RM, Lutz-Prigge S, Farley AH, Moran JV, Kazazian HHJr. Hot L1s account for the bulk of retrotransposition in the human population. Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5280-5. Epub 2003 Apr 7.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12682288">PMID:12682288</a>.</LI><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R,Wilson RK, Eichler EE. A human genome structural variation sequencing resource reveals insights intomutational mechanisms. Cell. 2010 Nov 24;143(5):837-47.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=21111241">PMID:21111241</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR;E: fosmid-end sequencing	NA;NA	58;NA	6531;NA	282;NA	NA;NA	intergenic;intergenic	
0	chr7	31490305	31491778	2000082	0	-	Druze98; AC005090; RIP_L1_chr7_031_01	CAAGTTCATTATTCCACAGA	AAATATGGTTTGGAATGAGC	LINE	L1	L1HS	gtgatttctgggattttggtgtacccatcactcaagcagtgtacactgtacccaatatgcagtcttttatctctcaccccctcccacccttcccccagtc<br>cccaaaatccaatgtattattcttatgtctttttgtcctcatagcttagctcccacttatgagtgagagcttacgatgtttaatttttcattcctgagtt<br>acttcacttcgaataatggtctccaattccatcaaaattgctgtgaatgccattatttctatcctttttatggctaatagtattccacagcgtatacata<br>tatatctcacattttctttatccactcattcattgatgggcataaaggctggctccatatttttcaattgcaaattgtgctgctat<font color="green"><u>AAACATGTGTGTGC<br></u></font><font color="red">CTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCT<br>CAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGA<br>AAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCT<br>AAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCATGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAA<br>AAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAA<br>AATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAG<br>TGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGC<br>AAATCAAAACCACTATGAGATATCATCTCACACCATTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGG<br>AACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGAC<br>CCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATACTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATGG<br>CAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGA<br>TGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTC<br>ATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATT<br>GGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTAC<br>CCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGGAGAGCAAAAAAAAAAAAAAAAA</font><font color="green"><u>AAACATGTGTGTGC</u></font>aagtatcttttt<br>catataatgacttctttttctctgagtagagatgcagtaatgcattgctggatcaaacagtttgagtacattatttattcaatgactgctttttgacaac<br>ttaccatgtgctgagctctgttgtgagcactggcaatacccaagttgggagagaggggttgggatggccctggaggcccccctcttccccttgctgtggg<br>ttagcaaagagaggttgttcctgagacagtgaccaaagcacacagccaagcactctggaggctccacctctctgatgaggctgcttctctattagggagc<br>ttttactttacaagatcacccattcttacaaatatgcaggacaaggtgggagtggaggctttccctctgccaga	UCSC	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Boissinot S, Chevret P, Furano AV. L1 (LINE-1) retrotransposon evolution and amplification in recent human history. Mol Biol Evol. 2000 Jun;17(6):915-28.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=10833198">PMID:10833198</a>.</LI></UL>	E:Library screening:TE-specific hybridization; E:Insertion-specific detection:PCR	NA	48/48	NA	NA	NA	intergenic	
0	chr12	125349471	125355550	2000083	0	-	L1HS117; AC005885; Druze99; RIP_L1_chr12_125_01;AC219111	GATTCTAAAGAGGTCCATGT;NA	GATATTACATGCAAAGGTGA;NA	LINE	L1	L1HS	ctctgtgcatcccaactatatcccataaagagtttcccatctataaaatgggattcataatagtagttaactcaaggtggcattgtgaggattaaacaag<br>ttaaaacatatgaatcactgacaacagtgcctggcacattagcacatagtaagtgcccgatcagtataaagcatcattgatattacatgcaaaggtgatg<br>ctatggtttggatgtttgtctacccaaacctcacgttgaaatttgatcccaatgtggaggtatggtctagcgggatgtgtttgggtcatgggggtggata<br>cttcatgaatagattaatgccatgtccgtggggatttgggggtgagtgagttctcactctattagtttccataagagctggttgtt<font color="green"><u>AAAAAGGAGCCCGG<br></u></font><font color="red">GAAAAGTTCTTGCGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCC<br>ATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTG<br>CCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATTGGGTCACTCCCACCCGAATAT<br>TGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGC<br>ACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCTGGAAGCT<br>CGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAAC<br>CTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAA<br>GTGGGTCCCTGACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTG<br>CAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTA<br>GATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAG<br>CAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAA<br>AGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACC<br>AAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGA<br>AGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGG<br>TGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTT<br>CAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAA<br>AAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAG<br>AGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAA<br>TACTTTATAGACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGT<br>ACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGAC<br>AGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGAC<br>CCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAAC<br>AAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGG<br>ATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGAC<br>TTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGA<br>ACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTC<br>CAAAATTGACCACATACTGGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAACTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTA<br>GAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAG<br>AAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGCGTGTAGAGGGAAATTTATAGCACT<br>AAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGC<br>AGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAA<br>GGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCAC<br>CGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACA<br>TACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATCGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAA<br>AGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGA<br>GGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCTGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTG<br>ATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTG<br>GGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGA<br>AAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGAC<br>AAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCA<br>ACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGA<br>CGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTA<br>CAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACC<br>TAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACAT<br>TCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACT<br>TTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAG<br>GCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAAC<br>AGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGG<br>TGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACG<br>TTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAAT<br>GGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACA<br>TGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCA<br>TCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAG<br>AGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGA<br>GAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATAC<br>CATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACATATGTTTATTGCGGCACTATT<br>CACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATA<br>AAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATAT<br>TCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGG<br>ATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGC<br>ACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAGAAAACCACTCAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AAAAAGGAGCCCGG</u></font>aacctc<br>cctcactttcctccctctctcgccatgtgatctctgcacacactggctgcccctcaccttctgatattagtggaagctcatggttctgcaggttgacatg<br>ttcttgcaaaacctgaagttgtactgaagaattgaagccaacctaactctaaaaccttttcttttttccatatctagggatatcattttctagggtaaat<br>atgcttccctaatggaaaacatggacctctttagaatcagaaatctcatctgtacctgaacctgatttcaactcccaaatcctgaatttgaattgacaat<br>ctaaaataacaaggttttgagatcctgggaggaagtgagtatattttgcatcagggaggagcatataaaatctttggtca	UCSC;UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Brouha B, Schustak J, Badge RM, Lutz-Prigge S, Farley AH, Moran JV, Kazazian HHJr. Hot L1s account for the bulk of retrotransposition in the human population. Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5280-5. Epub 2003 Apr 7.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12682288">PMID:12682288</a>.</LI><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R,Wilson RK, Eichler EE. A human genome structural variation sequencing resource reveals insights intomutational mechanisms. Cell. 2010 Nov 24;143(5):837-47.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=21111241">PMID:21111241</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR;E: fosmid-end sequencing	NA;NA	57;NA	6629;NA	535;NA	NA;NA	intergenic;intergenic	
0	chr8	17903786	17904702	2000084	0	-	L1HS77; Druze100; AF417124; RIP_L1_chr8_017_01	GAGAAAGCACCTGTAGAAAC	GTCTAAAGAGCTCAACTACA	LINE	L1	L1HS	gttttcacacttagagcgtctaaagagctcaactacagttgagggttgaagattccagtcatttattaattcattaatgtttactgagtgtctacaatgt<br>gcatgtactatttttggacagtgaccaaaagagattaacatctcagatgtcatggatcttgtattttagcatggagaggcagacaaatattacataggtt<br>aaaggtggcgtgcaagcactaagcaggtaaaggataaggcagaggtttactcagcaaaagttaacatttgaccaaacagttgagttcaagaaaacaagcc<br>atgcaggtaggtatgtgaaggaagagcattccaggcagaagtattagcaagtgccaaggcctcagaagtgctaacaactctagtaggagagtt<font color="green"><u>GAAAGGT<br></u></font><font color="red">CAAAAAGTGGGCGAAGGACATGAACAGACACTTTTTAAAAAGAAGACATTTATGCAGCCATAAAACACATGAAGAAATGCTCATCATCACTGACCATCAG<br>AGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTATAAAGTCAGGTAACAACAGGTGCTGGAGAGGATGCGGA<br>GAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATAC<br>CATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATT<br>CACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATA<br>AAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATAT<br>TCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGG<br>ATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGC<br>ACATGTACCCTATAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAGGAAAAAAAAATTTTACCAAATTTTTCCCCAAAAAAAAAAAAAAAAAAAAAA<br>AAAAA</font><font color="green"><u>GAAAGGT</u></font>tagaagcagcggcaaaaggatagtaaggccatttaggaactgttgcaattgcccagaacaaggctacgtgtttctgtttttacatgga<br>ataatctggacacgatcagctgactttttcctctcagctgtaaagtcagatacagagaaagcagtttctacaggtgctttctcaaagatctctcttctct<br>caaaacattccanaaaaaaagcaattacttctgctgagggaagaaatatgagcacaatggaagcaattctctgtggtacatgtcttacaaagaaaagtat<br>gagtacaatataagaaactagcccagtgacaatgtattttgtagtttaccatatctagatgaaaagaaaacaattacttttcacttctaattgttaaaac<br>ttcca	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Ovchinnikov I, Troxel AB, Swergold GD. Genomic characterization of recent human LINE-1 insertions: evidence supportingrandom insertion. Genome Res. 2001 Dec;11(12):2050-8.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=11731495">PMID:11731495</a>.</LI></UL>	E:Retrotransposon display:L1 display; E:Insertion-specific detection:PCR	NA	58	990	78	NA	intron:PCM1:NM:006197:29/39	
0	chrX	55601886	55601887	2000085	0	-	L1HS30; Druze101; AL022166; RIP_L1_chrX_055_01;AC206417	CTAGGTATGATTAGAAGATG;NA	TCTTAGACAAGTTCAATCAC;NA	LINE	L1	L1HS	atcatgttagcatgtttctaacgactctctcagggccttgaaaggggcctgtgcaactgacagacactgaagattaatattccttagcttcatagtagat<br>gcacctctgcaccacatctgatacatcaagtctagaactcttaaggttaataagtggttgaccctccagtagttgtgctggtggcccagtccagcactgt<br>tgactaatacaactctcacgtttatttgcaaacctcctagaagtctttcttagacaagttcaatcacttctcctcaaaggaaaattttgtggatttgtca<br>tttaagatggcaaagatgtatttgtctcttgggaattgcccctaaacagaaaggaaaatgagacttagtaacataaactctaacatc<font color="green"><u>AAGAAAACAAGAA<br></u></font><font color="red">ATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTA<br>TCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAG<br>ACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGA<br>CTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCAT<br>ATCCAGCCAAACTAAGCTTCATAAGCGAAGGAGAAATAAAATACTTTATAGACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGA<br>GCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGC<br>ATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAA<br>TTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAA<br>AATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGTCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAG<br>ATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCAC<br>CCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAG<br>ATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCA<br>ACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAA<br>TTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCT<br>GCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGG<br>GACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCCACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAA<br>AAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAAC<br>CCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAACAGAGAGAAGAAT<br>CAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATA<br>AACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATCGACCAATAACAGG<br>CTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTG<br>GTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCA<br>GAGACACAACCAAAAAAGAGAATTTTAGACCACTATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACAT<br>CAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGA<br>GCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTA<br>TTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAAC<br>TGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATT<br>CAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGA<br>TAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGAG<br>TGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTG<br>CTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAA<br>TTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCG<br>CATCACCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGG<br>TACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGA<br>AAAACAAACAATGGGGAAAGGATTCCCTGTTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACC<br>TTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATA<br>GGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAG<br>CAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAA<br>TGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAATTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCC<br>AAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCA<br>TTAAAATGTCAGGAAACAACAGGTGCTGGAGAGGATGCAGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAA<br>GTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGC<br>TATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGA<br>AAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCT<br>CAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATC<br>ACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGC<br>ATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAA</font><font color="green"><u>AAGAAAACAAGAA</u></font>ta<br>tatttagatgtataaccttgaaccacaatgaggaaagaggattagtagcttacttagcagagcaatagaatgtaaatttaagtgttttcagagaggcata<br>gaaaaaaagatgaaaacccatttactccaaagacaattagaaaagtttttggaattttgggcactagaaactgtggaagtggaggtatggcattgggatg<br>aaaactggagtgttgctagaaattctaatacttagaaattccacaccatcttctaatcatacctagactttcaaggtgatcttagttccacagcatctgt<br>ctccactgcctctatgactgttacagtaagtagagccctgtgccacagagtcctcccaaagctcaaagcttgaattctttgtgac	Other;OTHER	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Boissinot S, Chevret P, Furano AV. L1 (LINE-1) retrotransposon evolution and amplification in recent human history. Mol Biol Evol. 2000 Jun;17(6):915-28.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=10833198">PMID:10833198</a>.</LI><LI>Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R,Wilson RK, Eichler EE. A human genome structural variation sequencing resource reveals insights intomutational mechanisms. Cell. 2010 Nov 24;143(5):837-47.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=21111241">PMID:21111241</a>.</LI></UL>	E:Library screening:TE-specific hybridization; E:Insertion-specific detection:PCR;E: fosmid-end sequencing	NA;NA	60;NA	4795;NA	97;NA	NA;NA	intergenic;intergenic	
0	chr7	129907891	129908486	2000086	0	+	L1HS13; Druze102; AC007938; RIP_L1_chr7_129_01	CACTGAATTTAGGCTGGTAT	CATTGTACAGATATGCCACA	LINE	L1	L1HS	tcactgctccccgttccagccctaggcaaccactaatctactttgtgtctttatagatttgcctattctggacatttcatataaatggaatcatacaata<br>tatgttcttttgtgactggtttcttttacttttcaaggttcacccatgttgtagcatggattagtccttcaatcccttttattgattaataatattccat<br>tgtacagatatgccacattttatttttatcccttcatcagttgatggatacttgtgtgaactcagtggatttgccttaaagtgcttgaacaactatgaca<br>agcagagtgttgtacgatggagatagtggaaatgggggtaggtgggttacagatgggaaggaaccccatctatggtttt<font color="green"><u>AGAAATTCTGGGTTTTGTTCC<br></u></font><font color="red">ATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGAGCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAA<br>TCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACT<br>GGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAAC<br>CATCATTCTCAGTAAACTATCACAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAG<br>GGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATCGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAG<br>CGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AGAA<br>ATTCTGGGTTTTGTTCC</u></font>tttcttcttcttttttttttttttttttttgagaaatgaacaggccaaagagaggagtaattcatggatctgactttattcat<br>ggttcattctccccactttagtaccatattccattccccactgcttagaccacagaggagaaagtctctgaaataccagcctaaattcagtgaaacctgt<br>ttaaataagtaatttcattcaactgaagaattttcagtagataaaatagataaaatacggcctccaggactcttgcaccagtctgacttttagctgctgc<br>caaaaacaaaagaatgtttcacttggaagtgttccttgttcttcttttaaggtaaatctttactttgcagattgtagagttttcaatattatcttg	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Boissinot S, Chevret P, Furano AV. L1 (LINE-1) retrotransposon evolution and amplification in recent human history. Mol Biol Evol. 2000 Jun;17(6):915-28.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=10833198">PMID:10833198</a>.</LI></UL>	E:Library screening:TE-specific hybridization; E:Insertion-specific detection:PCR	NA	59	745	128	NA	intergenic	
0	chr2	169813380	169819408	2000087	0	+	238226; Druze103; L1HS15; AC007556; RIP_L1_chr2_169_01;AC204955	GTATCTTTTGGTTTCATCAG;NA	AATCAATGACCAATCAGTCA;NA	LINE	L1	L1HS	aactattgcagcaggaaaataaacatatatttttaaaagaaagaattgcatcaatgtggattttctctttaatgatagtttaactagaaaaccctaatta<br>atcagaaaatgtttaagatgtcataaattttatttgaccaatttccttatctgtggtctaatcaatgaccaatcagtcattggactccctaaatctttct<br>agagcctggcaatcccagtcccactactaacaaaggcatcctcatatacttaaataagtaaggagttcaataaatcttttagttctgtgtggtgcacaat<br>caagaagatctagccctttagtaaaaaggtacacaatttctatggtgttgcacaacaaaagaactttccaaaagaaattcac<font color="green"><u>AAAAAACAGCAATGTTGA<br></u></font><font color="red">GGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTAC<br>CGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGAGCGAGGCATTGCCTCACCTGGG<br>AAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGTCGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCA<br>GACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTG<br>AGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTG<br>GAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACT<br>TAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACAGACTGCCTCCTCAAGTGGGTC<br>CCTGACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGA<br>GGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAA<br>CCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGGAACAGA<br>ACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAA<br>GAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTC<br>GAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGTGATCAACTGGAAGTAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGA<br>AGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCT<br>GAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTC<br>AGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTT<br>AAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTTGGCAGAAACCCTACAAGCCAGAAGAGAGTGG<br>GGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTA<br>TAGACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCACTAAACATGGAAAGGAACAACCGGTACCAGCC<br>GCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCA<br>AATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAG<br>TGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAA<br>GGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATT<br>CAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGTCTTAGACT<br>CCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGC<br>TCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTGTTCCAAAATT<br>GACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCA<br>GGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAA<br>GATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCC<br>TACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGC<br>AAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGGCACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAA<br>CAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAGAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCA<br>CAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTTCGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCT<br>CCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCA<br>GGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACATGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCC<br>TCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACAT<br>TGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCAAATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAA<br>GGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCT<br>TTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCAC<br>AGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTG<br>TTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGA<br>TTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATC<br>ACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATC<br>CAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCT<br>CATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCAC<br>AGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACA<br>CTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCT<br>CAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGA<br>AAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCT<br>AAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAA<br>AAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAA<br>AATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAG<br>TGGGTGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGC<br>AAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGG<br>AACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGAC<br>CCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGTGGCACTATTCACAATAG<br>CAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAACGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGA<br>TGAGTTCATATCCTTTGTAGAGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACTGCATATTCTCACTC<br>ATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATT<br>GGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTAC<br>CCTAAAACTTAGAGTATAATAAAAAAAAA</font><font color="green"><u>AAAAAACAGCAATGTTGA</u></font>aagaaataaataattattgctattttgggaatgttgtgttgtcctcatgggta<br>tgcattcaaatttttttcatactgatgaaaccaaaagatactaaaactacattttctcgaatcccaaaacatcccagcccagagcagagaaaattcaact<br>ttttataatgtttctatgtgacagcaaatagcatgtgtctgacatcattagtgaaaagggagtaaatggatggcagcggcgggagggggacgggaggagt<br>atttataattaactcatcaaaaatctcatgagcattttttaaataccacacactcctccacagataaacagacagcaggacaagatatgcaatatactta<br>ctaactattcattccacacatacattcta	UCSC;UCSC	<UL><LI>Bennett EA, Coleman LE, Tsui C, Pittard WS, Devine SE. Natural genetic variation caused by transposable elements in humans. Genetics. 2004 Oct;168(2):933-51.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15514065">PMID:15514065</a>.</LI><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R,Wilson RK, Eichler EE. A human genome structural variation sequencing resource reveals insights intomutational mechanisms. Cell. 2010 Nov 24;143(5):837-47.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=21111241">PMID:21111241</a>.</LI></UL>	C:Reference; E:Insertion-specific detection:PCR;E: fosmid-end sequencing	NA;NA	48/48;NA	NA;NA	NA;NA	NA;NA	intron:LRP2:NM:004525:19/79;intron:LRP2:NM:004525:19/79	
0	chr2	143727276	143727277	2000088	0	+	Melanesian104; RIP_L1_chr2_143_01	CATGTCAACAGTTTGATAGG	ATGAAGTGTTTCTTCCTGAC	LINE	L1	Ta-1	tctagatgacttgcatcaatatttgattagatacattagctggtcgaactctcaaatgatcagaataaacatgattatgtcttaaaaacatggtattaag<br>gcattgttggacgttggagtgtatgtgtgcaatggtttcattacctgcagaataatgaagtgtttcttcctgactgaaaaagaccatcatagcttcagct<br>gatgtgctacattggaaatagctttagaattccaagtttgaattaggcttggtgttcaatctcagtctatgaattatagattacagatagcaaatgacta<br>ttgagatttttggttcaaggaaaatcaaagaagagcaaaattagaaatattttaaaatttgaaatctgtctttaaaaagtttgatggattagcaattgta<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>tgccatgtaattacaatgtctgcagagaagttgaacttaaaatgaataggaaaacaaacaaaaaattgtatgtgcctgag<br>aaatgttgcaagtctcagaagcacacatttgtgacaaccaaaaatggacagatttcatttatttcatttgttcatatatgctgtttggatgtttgagttg<br>ttttctctttgtactgaaatccaaattttccttcctagttgaaatcctatcaaactgttgacatggactgaatcttatttgattgctatgtggaaacata<br>acaatgacaacattaattattaagttttggtattcaacaactttcagtaaatcagaatgatacttgctaagtttaagaatatctgcatattttataacag<br>cacactctttggcctaattg	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/48	NA	NA	NA	intron:ARHGAP15:NM:018460:6/14	
0	chr19	56867750	56869325	2000089	0	-	L1HS112; Melanesian105; RIP_L1_chr19_056_01	CTGAGTACTGAATGTGTATG	ACTGAGTGCCACTTAATTTC	LINE	L1	L1HS	taaataatgcagcctcaaaatatataaatccaaagttgtcagaactacagaaaatgtccaaattcataatcatagtgggaaattttttaacatatctctt<br>tcattaatgagtaaattaaacatgaaaaaagtcagtgaagatgaagaaaatctacacaacatcatcaacaaattgacttaaacaaaagacaaaacagtac<br>actcacaacagcaacaatacatgcattattaaagcacacacagaatatttgtacaacttgatcagagactgagccattgagaaaatctcaacacagttta<br>agggatttatatcacaaaaagtatattttctgatcactttgttgttaagatggagatctgaaacaaaaatattattgaactcttgaaaggtt<font color="green"><u>GAAAATTA<br></u></font><font color="red">TGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATC<br>CAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAG<br>ATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTA<br>CTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTT<br>CCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTCAGGACATAGGCGTGGGCAAGG<br>ACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTAC<br>CATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAA<br>ATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGA<br>AGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGG<br>AAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGTGA<br>TTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACAT<br>GCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACAT<br>ATACACCATGGAATACTGTGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCG<br>CAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGAC<br>TGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTAT<br>ACATATGTAACTAACCTGCACAATGTGCACATGTTCCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>GAAAATTA</u></font>agaaattttatccagt<br>attagagatggaacctaatgggagatgtttgggttatgggagtgggtgcctcatgaatggcttggtactgtcctcttggtaatgggtgagttcttgctct<br>attaattcttacaagagcggttgttaaaaagaacctgccacctgcactgtccctatctcttgctttctctctcctcatgtgatctttgcacgtggtggct<br>cccctttaccttctgccatgagtagaagcggcctgaggcctcaccagaagcagatgctggttccatgctttctatacagcctgcagaactgtgagccaaa<br>tacacctcttttctgtataaattacccagcatcaggtattgcttttttagcaagactaaatggactaagacagata	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	60	1686	102	NA	intergenic	
0	chr9	104113267	104113268	2000090	0	+	Melanesian106; RIP_L1_chr9_102_01	AGAGGTCTGAACAGTAAATG	TCTGGCTCTAATCAATGAGT	LINE	L1	Ta-1	ctttatttttagtcaagtgtaaatagacacaaaatatacatagttttctctggctctaatcaatgagtggattttctcatgataaaataacttagtttat<br>aaataacagtaaaatattatagaatatgactaacacctagaagtaattcaatgagagttggtttttgcatcaaagttatgcatagtcaaattaagtagct<br>ggtatacatgtagaatttcctagagtagtttcatatacataatactattaattctctcattaacactaacagttgattttattgttattattgacattaa<br>agagaaggctcagagaaattacataacttgtatgaaatcacacagtggagatttgacatcagatcttttctatctccaaagtccttgtactttccattat<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>actctgttgcttgtctaattaagataatgcatcatatctagttttatctcctactcccttttaggagaaaaaatagccca<br>aatgtttataatgtttcttgctgacaagggtttcctcaatgtgtcagaatttaagtactctggctttagtgaagagtgccgtataatttctcttatctca<br>gttattacaaatttaactagcttaaagtagattttattcatcatacccttctacctacgaattttggcttactgggcttcaactattagatgtcaccttg<br>actctctgtaacaagagaacctttctaagaatcccagattctacactccatacccgcatttactgttcagacctcttatgaagttgatttagccctacaa<br>gtctcgctgtgcttgtccgt	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	45/48	NA	NA	NA	intergenic	
0	chr7	91264198	91264199	2000091	0	+	Melanesian107; RIP_L1_chr7_091_01	TGAATATCTTCTCACCAGTG	AACTGAAATCACAGGATCAC	LINE	L1	Ta-1	aaaataatcatggagaagaaaagaaaatcatggcacctaaattaataggcactagacatttgaaacaaggaattgaaataagtgtgcaaatttaaattgt<br>ggaattttcctttgtgttcttctcatagttattcacgatacaggcaatatcatttgcaagcaaagataaacattctttactgatgccaggaaacattctt<br>tgcagcaaaaacttactaatgaatatcttctcaccagtgggctcctatctcctaccaagaagaaaaactaattatttttcttaaatttgtttcaattttt<br>agattatattttctacattaagcaaaaaaaaaagactgaaagtctatgagccctttaaatcatattttatcacaattttcttcacttaatcatattatag<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>gaggagagagaccattcttgatatgtctttatgaaagatggcaatatgttatcacttttcccttcaaattatattgaaga<br>tattggcatagaaatagattattagcttattctattataattaatgtgtttatgatgactaaagaaaataagggttctatgtgatcctgtgatttcagtt<br>ataaccaatatacacaaccagtaagttctttaaaatcaaggttgatcagaaatgaccccatcacgtaggcctctacagtattggggggatgggggggttc<br>ctttttttatcttagatttatcttttattttatttttaattgctatggatatataatagttgtatgggtggaggtagggtttgttttgttgtgtgttttt<br>gagagggagtctcactctgt	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	45/48	NA	NA	NA	intergenic	
0	chr2	101409206	101409207	2000092	0	+	Melanesian108; RIP_L1_chr2_101_01	AGGAAGGATCAAAGTCATTC	AGTAAAAGTAGCGTACAGAG	LINE	L1	Ta-1	ggatggagagaagttgatcaatgggtacaaacagacagaagaaatgagacctaggctttgatcaatctagtagagtgactatagttcacaaaaatctagt<br>tgatattttcaaatacccagataagaatcatttggctgcctccagaaaaagaaaagatacctgtttaaggcaataagtatcccaattatactgatttgat<br>ctttacacagtatagaaatgtgtcaaaatatcacgcatatccagaaaatatatacatctattatatatcagtctttaaaaatccaccaacttttaaataa<br>taactgtgttgagtgtggtggctcatgcttgtaatcccagaacttttggaggctgaggcaggacgattgcctcgggccaggagttcatgaccagcatggg<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>caacatagtaagagcctgtctctacaaaaaattaaaaaaaaacaaaaacacaaaaaacatttctgggcatggtgacatac<br>gcctgtagtcctaaatactcaggaggctgaggtgagaagttggcttgagcctagaagttggagactccagtgagctgtgatcgtgccactgctctccagc<br>ctgggcaaaagagcaagacctcgtctctaaaaaataaaataaataaataaatactgcataatgacaaatatgtataaacaaaagctatatctaaaaaatg<br>accattgagaaattctacgtggattctttaggtatattaaatgcagtttgagattttgacagacccaagaaatgtcactggagttacatgctaccattca<br>tctactcattctttagtgag	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	50/48	NA	NA	NA	intron:LOC731220:NM:001145664:2/12	
0	chr11	9999211	9999212	2000093	0	-	Melanesian109; AC011092; RIP_L1_chr11_009_01	GAATGGCTACAGTCAACATT	TTTGTATTCACAGGAACTGG	LINE	L1	Ta-1	gtcttgtgtttatttggtttttggtttttttgttttttttgtttttttggcagcctatgtgaactatttttgtttacctgaggattagtgttttaagtgt<br>actaacaatgctgggatttttaatgttaataagtttgtattcacaggaactggtttttatagaccctgtgatattttaatctaatccatacccgtttaaa<br>cttgggtgtccctccctgccccaaataatcttgtaaaatgctcttgacatcttttgtcatgtctgttcacctgtaatttggattttactagaacatgtac<br>tagttttagaaaatgtatccaacagttttcacagtatactctttaataggcatttttgaaaactgactaaaatgatcctgggccatcagctatcaacact<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>ttgtttccacagttaaaccacattaatcttgtatcatttgtgtttgtacctttttctatgcatgctttctttttacttgt<br>ccatggttaactttggccagttttttattagctattgatgggtcagtatgtctccatcgatgatctctgatattaaatatagggtttttttttaaagttc<br>ttaaaaaagtttttgttcagtttgtcttacaaatattattcttactttgtacataaaagttattaaaatgttgactgtagccattccttgctattcagca<br>agttgtttcagttttaaaatgctttaatggaaaacctttggtagtctcacttttgtctttccctggaaaaacttctctctgtgatactatgtgattattt<br>ttgaagtgataatgttactg	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Badge RM, Alisch RS, Moran JV. ATLAS: a system to selectively identify human-specific L1 insertions. Am J Hum Genet. 2003 Apr;72(4):823-38. Epub 2003 Mar 11.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12632328">PMID:12632328</a>.</LI></UL>	E:Retrotransposon display:ATLAS; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	45/48	NA	NA	NA	intron:SBF2:NM:030962:6/40	
0	chr8	77499942	77500980	2000094	0	-	Melanesian110; RIP_L1_chr8_077_01	GTTTAGTGGTAGATACAGAC	AACATGTGGATTCACTTAGG	LINE	L1	L1HS	gagctgtaaatccaccaagaactttctctgacagcttttatgctgaaaacctccacggatgtttcattttgagagacagtgtagtgtagttaagagcatg<br>gattctagagttgatctgcttgtgtttaatttcaagatccactatttatttgctgcacgtccttgctcaacttacttacttactctctctgttcttctat<br>ttcctcatcttcagatggcggtaatattatctacctcatagttgaggtattaaattagttgatacaggcaggacacttatgacagtacatggcatatagc<br>aaatatttacatagcacctactagtattatttaccagcctttagcttaaattaataccagtcatatttatgaaataccagtccccttccttgatt<font color="green"><u>AAAAA<br></u></font><font color="red">GACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAA<br>TTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTG<br>GGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAA<br>ATCAAAACCACTATGAGATATCATCTCACACCATTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAA<br>CACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCC<br>AGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCA<br>AAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATG<br>AGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCAT<br>AGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGAAGGGATAGCATTGG<br>GAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCC<br>TAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AAAAA</u></font>ccagctccccatacatctagttaacaacccaaagtctgtatctaccactaaacatg<br>gcaacttagtcatttaccaacttaggttcacattcagtggaaagaaaataagtgataaggtaaagtttaggaagaactgacccacttatgcctagtgttc<br>cattattggagtgctaagaatgtgagagttttttatatcctgctgctcaaggttattaccaaggtctgattttttcactcatgtaaaagttcaaaaaatg<br>gcaacctctggcataaatgggttaataatagccagggacaaaggtgatggacgcagatgcaggagatcaagtgctatttttggcacaaagttactcactg<br>tctccgggtgatactctgttgagattacctggtcactga	UCSC	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	48/48	NA	NA	NA	intergenic	
0	chr4	17803552	17803553	2000095	0	+	Melanesian111; RIP_L1_chr4_017_01	GAAATGCACTACAAAGCATG	AGTCTTAATACACAGCCAAG	LINE	L1	Ta-1	cattcagagcctcattcctggctcttagctcttattgctaggagggctcttatttgccctcttagcaaagcttttgaatctacagggcaacctgaagatt<br>aaggggaagataaacctcattcattttcccagaattttatctcttcacatgtaaaaggggcacagggtcatgaaatagcctgacatggggcagggatggc<br>tttctccaacagggacattagtacctcttgggcttccagaaatgcactacaaagcatggagaggaaagaataaaggcaataaaagaaatgagcaatcaat<br>ttttatcacctggttaagtaatctaaactttttaagcacatactttataggtacatgtatgtatagtaaaaagttttcttcaaatttcaaggtgacactc<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>atgattaaaatattaagcttgaggtggactatttaagcctctccctccagcccctgaaggtacctgctggtgcttttctg<br>ctattaggtgtacatagtggatgtcttgcaaaaaaactggataaggaaattgttttaaactgcttggctgtgtattaagacttaattcgctgctccctct<br>tgaattaaatcctctagtttatcaaatggctaaagcccaatctgtctaaaagagggagctggctgtgctacaagaatttatgtttccatcctcccaagtc<br>ccatctgtgccccggatgtcacctggagagatggtgtttggaagagcaaggcagggacaggccaaggacaaaacgtggatgagtcaagcaggagccatca<br>gcagggagcaagccctcttc	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	50/48	NA	NA	NA	intergenic	
0	chr9	71967361	71967362	2000096	0	+	Melanesian112; RIP_L1_chr9_070_01	TTGATTTGACTTCACAGCAC	AGCAAATGCTCCTCATAGTA	LINE	L1	Ta-1	ccagtgtttagttctttaacacaaacagtccttttgaactatataacaaagatttgatttgatttgacttcacagcacccaacaaaatttatttcctcca<br>tttcctggcaaaattctattcattatatttggtagttgttaaactataacatcctataaagtgaaaagcaataaccctgattattttaaaacctatcttg<br>atttggtttgagaacatgaattcctgacatacctgattctctactttttctttcctgggtacttttgttttgttttgtttttttaagacaggatctcact<br>ctgtcacccaggctggagtgcagtgatgtgatcacagttcactgcagcctcaacctcccgggccgaggtgatccttccacctcaacctcctgagtaactg<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>gaactacaggtgtacaccaccgtgcccagctaattttttatacttttagtagagagggggttttgccatgttgctcaggc<br>tggtctcgaactggctgcaatctgcctgccttggcctcccaaagtgttgggaacaggcatgagccatggcacctggactcgtgggtactttaaccaggaa<br>cttttatgaactttgacaggcctaggggcagtctgaccccttggactaacacaaccttgtaggtgggtttccacacagacctcctcctaatcaaccaccc<br>ccctcaaaaaaaaaaaaaaactttagaagagacttaaaattatatactatgaggagcatttgctcagtgaccttttaggttctgctgcctgtcattatgt<br>tgtttctagagagcagatca	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	50/48	NA	NA	NA	intron:MAMDC2:NM:153267:9/14	
0	chrX	80983310	80989346	2000097	0	+	Pygmy113; RIP_L1_chrX_080_01;AC209313	AGGTTTGTTTCCAAGTATTG;NA	GCATTTTCAGTCTTGTAGAA;NA	LINE	L1	L1HS	cacaaagatgtttgaagttttatttccatttgagcatttctctatatacattgattaatatgcattttcagtcttgtagaaaatgccaactgaggttaac<br>aactgccccggttgttatctttgtacccccaagcaactcaagtaacctattgtagatatagtcaattggcactcagtattcatcccaaccactttctggt<br>gtgcaatcctatattacagaggctggaaatttaaaaataatttataaacaacagtaagatagcactacctattagactgattaaaatctgaaaattgaga<br>attaacaattactgacaagaatgtagacagaaacccttatttatttatttattttttgcgggaatgcaaaatgttatggctacatt<font color="green"><u>AGAAGGCAATTTGG<br></u></font><font color="red">AGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCTGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTAC<br>CGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCTTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGG<br>AAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCA<br>GACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTG<br>AGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTG<br>GAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACT<br>TAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTAAGAACGGGCAGACTACCTCCTCAAGTGGGTCCCTG<br>ACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGT<br>CCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCAC<br>AAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGATCCTCACCAGCAACAGAACAA<br>AGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAG<br>TTCAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGA<br>ACTACGTGAAGAATGCAGAAGCCTCAGGAGCTGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGG<br>AAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAA<br>GTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGA<br>AATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGG<br>GCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGC<br>CAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCCTCATAAGTGAAGGAGAAATAAAATACTTTATAGA<br>CAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTACAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTG<br>CAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATT<br>CACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGCATAAAGAGTCAAGACCCATCAGTGTG<br>CTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCA<br>GGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATAAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAAC<br>AAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCA<br>CACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTG<br>CACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACC<br>ACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACGCAGGAT<br>TAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATG<br>TTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACA<br>AGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAACA<br>AATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAA<br>ATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAG<br>AAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAAGTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCC<br>AAGACTAAACCAGGAAGAAGTTGAATCTCTGAATCGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGA<br>CCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCC<br>CTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGA<br>TGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGC<br>TGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTG<br>ACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGC<br>CAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCATTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTG<br>GAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTG<br>TTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACA<br>AGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAA<br>CTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCAT<br>GGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGTCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGA<br>ATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCCTCACACTA<br>CCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACAAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAG<br>AAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAA<br>CTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAA<br>ACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAG<br>ACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAAT<br>TTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGG<br>GCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAA<br>TCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAAC<br>ACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCA<br>GCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAA<br>AGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGA<br>GTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATA<br>GGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGTTCGGGGGAGGGGGGAGGGATAGCATTGGG<br>AGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCT<br>AAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AGAAGGCAATTTGG</u></font>cagtttcttataaattcaacattatcttaccatatgacccaacattccc<br>atgctcctatgtatttatgcaaggtaattgaaaacttaagtctacaaaaaaaactgaaaataaaacctattagtagtatttttattctttattaccaaaa<br>actggaagcaaccaggatatcctttagtaggtgagtgaaattggaggtattgaatgctattcaataataaataggaatgaactatctatgaaatggactg<br>ccactgagtaataaaaaagaataaactatcaatccacataaaaatcactgaatcttaaatgcatatttctaagtaaaaaaagacagcctgaaaattctac<br>attctctatgatttcattcatgtcattctggaaaagg	UCSC;UCSC	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R,Wilson RK, Eichler EE. A human genome structural variation sequencing resource reveals insights intomutational mechanisms. Cell. 2010 Nov 24;143(5):837-47.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=21111241">PMID:21111241</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR;E: fosmid-end sequencing	NA;NA	48/48;NA	NA;NA	NA;NA	NA;NA	intergenic;intergenic	
0	chr8	107628674	107628675	2000098	0	-	Pygmy114; RIP_L1_chr8_107_01	ATACCTCTGGCATGTAATTC	TGTTAAGTAGTCGTTTAACC	LINE	L1	Ta-1	tgtacaaaaattagctgggcatggtcatgtgcacctgttatcccagctgtttgggaggctgggcagaagaatcgcttggactcgggaggcagaggttaca<br>gtcagctgagattgcgccattgcattccagcctgggcaacagagtttcactctgtctcaaaaaaaaaaaaaaaaaaagaaagaaagaaaggaaattctaa<br>cacattgtacaaaatggatgaaccttgaagatattatactaactgaataagccagttacaaatgaacaaatgctgggtgagtccacttctatgaggtacc<br>tagaatagtgaaattcaaggacagaaaatagaatgatggttgccagtgtctggagggagcgggaatggggagtttaatgggcacaaagtttcaattttgc<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>aagatgaaaatgttctggagatgaatggtggcgatgtgtacttcatgccactgaactgttcacttaaaaatggttaaaat<br>gggctgggtatggtggctcacgcctgtaatcccagcactttgggaggctgaggcgggtggatcatgaggtcaggaggtcaagaccatcctggccaacatg<br>gtgaaacccggtctctactaaaaatacaaaaattagctaggcgtggtggtgcacacttgtaatcccagctacttggtaggctgaggcaggagaattgctt<br>aaaaccaaaggcggaggttgcagtgagccgagattgcatcactgcactccagcctggcgacatagtgagactccgtctaaaaaataaaaacaaacaggtt<br>aaaatagtaaatttcatgtt	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/48	NA	NA	NA	intron:OXR1:NM:018002:3/16	
0	chr8	131110396	131110397	2000099	0	-	Pygmy115; RIP_L1_chr8_131_01	CAGTGCCTACTGTTAAATGA	CTGTCTTTAGGCATATTCAC	LINE	L1	Ta-1	tggaaatctgtattttaaacaggtactccagggggttctgatgtaagtggctctgggatcatgttctgggaaaacttagttttctcatctgtaaaatgag<br>aatagcaataaaactcaaaagtgttgatagaagcattaaatgtaattaatttcataatacacatgttagaaagaacataggattgagggtctgcactgga<br>gggctttagtcctaaatctgtctctaacttgctctgtggccttctggaaggcactcaacctttctgtgattcaatttccttgtgtgcaaatggaagggaa<br>tggcgctgctttctctctatcacgggattgttaggcaaaagcgctgaagacaatggctgtggaaatcctttgaggagtaggaagtgctaatcttatgaaa<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>cacagtcccgtggaaaatcaagcaggcagcaaagcagggacacatgaaacccactcaacaggtatttaggatttcaggga<br>ggactggagaccaggcagtcttgatgtggcgtggccagggaacatccttggggagctggggaaccttcttccacatggaagaaaagagcaaatgggctga<br>gtgcggtggctcgtgcctgtaatcccagcactttgggaggccgaagtgggcggatcacctgagatcaggagttcgagaccagcctggctaacacggtgaa<br>accccatctctgctaaaaatacaaaaattagccaggtgtggtggcggtgtgcctgtaatcccagctactcaggaggctgaggcaggagaatggcttgaac<br>acgggaggcagaggttacag	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/48	NA	NA	NA	intergenic	
0	chr2	4759186	4765231	2000100	0	+	Pygmy116; RIP_L1_chr2_004_01;AC215718	CGTCCAAGAAATCATTAGTG;NA	TGCCCTTAACTGAACAGTTT;NA	LINE	L1	L1HS	gtagctcagactacaggcgcccgccactacgcccggctaatttttttctattttttagaagagacggggtttcaccgtgttagccaggatggtctcgatc<br>tgctgacctcgtgatcctgctcgcctcagcctcccaaagtgctggaattacagcgtgagccaccacgcccggccataattaatgatcttagcttccattt<br>tgggaagctagaggaagaagaccaattaaagactaaagcaagtggaaaaaaagcaataataaaatttagagaagaaatcaatagaactaagaacgggaaa<br>tggagaaaaatcaatgaaaccaaaaacttgttctttttaaaaatcaatcagatagatagacctccagtcaagcaaaacaag<font color="green"><u>AAAAAAAAAAGATACTGCA<br></u></font><font color="red">GAGAGCACCGAGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCA<br>TCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGC<br>CTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATT<br>GCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCA<br>CAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGGCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTC<br>GAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACC<br>TCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTTCTCAAG<br>TGGGTCCCTGACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGC<br>AGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAG<br>ATAAAACCACAAAGATAGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGC<br>AACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAA<br>GGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCA<br>AGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAA<br>GCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGT<br>GTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTC<br>AGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAA<br>AATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGGAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGA<br>GAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAAT<br>ACTTTATAGACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTA<br>CCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACA<br>GGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACC<br>CATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACA<br>AAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGA<br>TCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACT<br>TAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAA<br>CTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCC<br>AAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAG<br>AACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGA<br>AATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACAACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTA<br>AATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCA<br>GAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAG<br>GATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACC<br>GATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACAT<br>ACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATCGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAA<br>GAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAG<br>GGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGA<br>TGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGG<br>GATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAA<br>AAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACA<br>AACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAA<br>CATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGAC<br>GACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTAC<br>AAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCT<br>AGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATT<br>CCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTT<br>TCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGG<br>CATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACA<br>GAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGT<br>GCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGT<br>TAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATG<br>GCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACAT<br>GGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCAT<br>CAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGA<br>GAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCATTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAG<br>AAATAGGAACACTTTTACACTGTTGGTGGGAATGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACC<br>ATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTC<br>ACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAA<br>AAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATT<br>CTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGA<br>TAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCA<br>CATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AAAAAAAAAAGATACTGCA</u></font>aattgttaatatcagaaaagtaaaaaggagctatc<br>actaatgatttcttggacgttaagaagataataacataatattatgactaactctatgaaaacaattttgatcacttcaaggaaatggatctttacaaca<br>aatggcgctagaataattgggtgcctgtaagcatcctgccaccccacaaaactagatccagaccttacacctttcacaaaaatcaactgaatcatacacc<br>tgtatgtaaaatataaaactatgaaacttcttggattaaaaaaaaaagacaatcttaaatttggcaataactttaagatacaataccaagagcacaacat<br>aatccataaaagaaaatactgatacatctgacttcactaaaatctt	UCSC;UCSC	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R,Wilson RK, Eichler EE. A human genome structural variation sequencing resource reveals insights intomutational mechanisms. Cell. 2010 Nov 24;143(5):837-47.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=21111241">PMID:21111241</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR;E: fosmid-end sequencing	NA;NA	45/48;NA	NA;NA	NA;NA	NA;NA	intergenic;intergenic	
0	chr5	40077569	40077570	2000101	0	-	Pygmy117; RIP_L1_chr5_040_01	GTAAGATTGGAAGTGAAGAC	ACCATATCAATTGGTGGCAT	LINE	L1	Ta-1	tctaacttatccaaagcatcacaacatttttattaatactaaggtctctgttcatttctccattcacaaacattatgataactattttcaaataatattc<br>cattttagtcacctgacatttacagcatgaattgtgtgaattcagctaagaattatttaaaataaacacagtagaaaaaatattgtggcaggttattttt<br>ttaaattggaagtataaccaaacaagcatgctggatcaaatgttgaattcatgctcacctaaaggaaatgtgtgtcttaaagaaaaatctagttagtaaa<br>tctttgtaacagggatacctctctggtatatgtgtgagtccttatgagcaaaaataaataaacaattgattcttgaggaaaaaacatgttttgaaatggg<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>agatgcaagtaaagccaaaacaaataccagtgaccaaaaggagttgcgctgtgtgtgactaggaattattataatgctgt<br>aaaatagctcattgttcatcaagcaagacatgagtaattcaaactgactaagcatgttgtttagttaacctggacatgaagctcaagttaaatattatat<br>gtttataaatgtgtttttttgagggcttgctgtggtgcccctcacacagtagatgctgaattaaggctttctgagtagttcatgcaatgaaagtcctttg<br>ggcatgcattataaagttatgtaaaattatttaattctttcacattttaaagagtatgaattcaaaaagacctaatatgaacttcagttctgccgctgtt<br>taatgtctgacattttctga	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	50/48	NA	NA	NA	intergenic	
0	chr4	8046711	8047793	2000102	0	-	L1HS395; Pygmy118; AF417132; RIP_L1_chr4_008_01	CGAAGTAACCTCTTCAATAC	GGACCTTGATCTTGATGTTT	LINE	L1	L1HS	catggaatttcttctctgtcctcattgagtccatgaggaacccccaaatgaaaggcccccggagaagcatcttttgctcagaagtgaggtccccggagag<br>agcgggtgggcagttctgtgcacagaacctgccttgcccctggaggcatggtccttgctacagacatgtggccttgtgagccaccttcccctcggaggcc<br>tcgtgggcagcttggaagctcccatgagtgaatgtgggcatctggccctgtacctggccgatctccgccaccagggcccagtactggggtgacaccccca<br>gatgaggcaggtgtgagccatgctctttaaggccccataggctagtggaaagacagacagtttagggacccaggacaggtctttt<font color="green"><u>AAGAATGCTTCCCTG<br></u></font><font color="red">ACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCAT<br>GTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGT<br>TTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAG<br>TTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCAGG<br>AAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGA<br>TTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACAT<br>GCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACAT<br>ATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCG<br>CAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGAC<br>TGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTAT<br>ACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AAGAATGCTTCCCTG</u></font>g<br>gtgtggagggtcctgcccctccagggtccaggctctgccccttcctttccaaaatgcaaccacaccacctttgagccaggcaggcgttcacttcctccct<br>gctttcccatcacgtggtattgaaaaggttacttcggaggtctaaaactcccagcaagctcccaggcccacccagggccagccagggacatgagtgatgg<br>agggagctcggtgggggctggaaaaggctgccccctcctgacagccccagcgagccttgccccacaggggaatccagagttcattgtctcagaccagccc<br>tctattatttcacgagaagctagaaatttggattttaatatgaagccccccaattgcaagcaactcaggattttttttatttat	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Ovchinnikov I, Troxel AB, Swergold GD. Genomic characterization of recent human LINE-1 insertions: evidence supportingrandom insertion. Genome Res. 2001 Dec;11(12):2050-8.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=11731495">PMID:11731495</a>.</LI></UL>	E:Retrotransposon display:L1 display; E:Insertion-specific detection:PCR	NA	61	1218	119	NA	intron:ABLIM2:NM:032432:13/16	
0	chr8	137292708	137292709	2000103	0	-	Pygmy119; RIP_L1_chr8_137_01	GGAAGGATATTATGGGAAAC	ATCCAAGGATTCAAACACAC	LINE	L1	Ta-1	gttccttttatatatgcatagttctgttaagcagtactcagctatttcctgcatttattttattactttggcaaggaggaaattatttcaaacatgggta<br>gaatcctgcatcctcacatggtctaacctactttttaaaatgggtgaatacttaagagttcgcctataattctcagcccaaatccaaggattcaaacaca<br>caaaggcttccaaaaagtaaaatgttctaatttatttattttcccatatggagcagaaattgtgtgccacaaaacctccattcataacttttgagcttat<br>ttgaacactaagatacatatttcactatattctctaattaaactgaacaaattttttctgaaatagagagggttttcattggcatgttgcaagctttacc<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>tgttatcttcccttattgcaaagtgtataatttgtcttctcagcaatggcacatatatcttaatgtgacttatgttagaa<br>aaatagcccatcatcagagaatattaattgctcttgttttctccaaaaagagaggaaaaaagtggtattcattgcaagagcagattcatcttcaggtttt<br>aaagggaacttaatgcaatgtttcccataatatcattccaataaatgttaggccctagaatccttccaagtcgccagttctgtttctccattattcattt<br>acaaaaaacccttctctgtagacagtcagattgtctccattttctagattgtctccattaagtacttatttttgtctgaatttctacctttgaaagagtt<br>ataacatgttatttttgagt	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/48	NA	NA	NA	intergenic	
0	chr13	60119099	60119100	2000104	0	-	Pygmy120; RIP_L1_chr13_060_02	GGACTGATTAATCTCTCATC	TTTCAGAACGAGCAGTTATC	LINE	L1	Ta-1	aatacttccacaaatgaaaatgtatgattcctagcactgcctctacccacagtctgtgggagggcaacatcaaaaagccactgggtgctcattaaaggct<br>gcccttagaaaataagaaaccattctccaccagcccacagcaaatagaaagaccaagcaatgtcttcaagggtttcagaacgagcagttatccagccagc<br>cagcagcaaccgcctctcaaatgggaatgtgcatttggcctccaataaagagattctgtgtacttgatgcagcgaattatattagagtagaaacgcggct<br>ctggttgtggctgtttttcttccttagaaaagccaggctgggaatgtgtaggtgtaaagcaattaaccttttaatacaaacatggagattggagctagca<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>ttgacccaggaaagagctaaatccattcccttgccaagatgagaagagccactgaagcatccctagcaactctgtccaca<br>gaaaggaagagcctcttagggaacactggggtgtcgcatcacaatcagccagctcaatctcagtccccacacactcccacagagctctgggcatgcatgc<br>gacatttacaggttgaaataggagcacagatgagagattaatcagtcctggggcagggctgtggtgtgacaaaagcatggcccctctggattgaaaaagg<br>aagtgaaaatattaaagtaagctgaccaaatgaggcacggttaatagaaaagatttgttcctctgtttattcaatttctatatatcagagacttggtatt<br>aggagtataatagcagagga	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/48	NA	NA	NA	intergenic	
0	chr4	66492256	66492257	2000105	0	-	Pygmy121; RIP_L1_chr4_066_01	AGTAGTCTTCATCGCAATTG	CATCCTTTCCACTGATATAG	LINE	L1	Ta-1	ttgctatgagatcaggttgcaatacatattcttgaacccataatttttggtggaacccataaatttcaacatttcgttttttatttttattttattttta<br>ttattttaaatgtattgcttctttagaaacctgtggcataatttaaaatatttgtgaaatttttaaatatcttaccactattgctttctaattaaatttt<br>attttgggctacatgaaatatcaattttttaaatcattgagagttatttttattgtcaagcatatagtatatcctggtaaaaattctttgcacacttgag<br>acaacaggtgctctaaatttgttaggtttaatcttctataagtatcaattaggtaaatatggataaaacgctgttcaaatagtttatagtcttgctgatt<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>tattttgtattttttatttcaattacatgtattttaaccttgactgtggaattgtttattcttcctttaattctattagt<br>ttttcagttctatgttttgaagatatattattatgcgcaaatgtattttttaactgtgtcttaacatttggtcattttacaaaatattcctttttcttac<br>caacaataatgattgttatgaactctactgcttttgatattattatagatattttatttttcatatgactatattttataattatgatatttcatgcttt<br>gattctcatcttgagtctttaatatttagtgtacaactattatagacaggatacacttgagtcgtgatgtttttgtccaatattaaaatctctgcctttt<br>aatttgtatgtttatcaata	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/48	NA	NA	NA	intergenic	
0	chr10	58816001	58816002	2000106	0	+	Pygmy122; RIP_L1_chr10_058_01	CTCTAAGCACAGTAACTACT	ATAGCCTTGAGTCGATAAAG	LINE	L1	Ta-1	gaagggccatgttatcagtataaattttgccagctccaatatagtatatactcttttgttaatctcacattaatcagtctattgacaattgttattcagg<br>aacaaataaataaaagtatataatagttggattaccagcacaatgtaggcttagacatgttccacagaggataagtcaattattaatatttcacttcttt<br>gtttttcacgctgatttcaaggaaggatacaagatatacaatatattatacatcttaattcaataatcacctttgaaaatacacatacaaaatgaaatcc<br>aacttataaatatttagaaataataaatgtttgtgaaattcagttttccatgttgcttttggttaagaaagtaaaatatagtagaaattgatggaaaagt<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>gtacataagggaaaaataaaagtgtattagagagaaataaaaagggatgaaaaacagggaactagaaataaaatcagtct<br>ttatattatagtttgaatgtttagaatctccttgtaatcttcaatggtcaggactaaagactaatacttatttaccagaggcatttgcaaatattttgtg<br>ccaggaatgagtctctaaaatacttgcttagacatttatgtgttacacagagaccaaaagaaaaaaaataaaatatatgattttttccattattcatcca<br>ttcacccatgtgtctgtgtgtctatccatctattactttctaaagttccattagagtgttttcagagagtggataaatgactacctggcttatttttttt<br>acaaagcctgtgtgcttctt	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	45/48	NA	NA	NA	intergenic	
0	chr4	147444591	147444592	2000107	0	-	Pygmy123; RIP_L1_chr4_147_01	TGTTTGTGACCATGTAATTG	TCCTGTTTAGTATTTGCAGG	LINE	L1	Ta-1	ccaacaacagacatctagcaagtctttaccttattctgcaacttttgataaggtctccgtgtttatgaccattgttgggaacaagcatctgtctttggtt<br>ggtgtctttatagactcctccaacagcagttatgtttgtgaccatgtaattgataaacaatttaatcctattatctcttaaagtttatcttagaatattt<br>agggtttactttgtcattcttattcaattggactgataggaattctattttaacttcttataacaagttagtagtaagcatataagcatacaaattgtaa<br>aacaagtggattttttttgttttctatgaaatcataggatgccacagtattggagtatagaatttaatgcacaactaaagtgaacaagtcttaggaaagc<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>agtacattaagagcaactagattctagacttatttctgccttttatttgcagtgttactatgggcaagttatttaatctc<br>cctagctctaggttcataatttattaaatattatgacaataatatctatcgtaaagggttgttgtaaagattaactgaaatatgcatgcctgtaaacttc<br>ttgtcatagaacctaacacaggtaagtgctctgtagcttctatcatcataatcattattaccaaattccctgcaaatactaaacaggaaacaagtctttg<br>aaatattgaatataaaaaatgtatgtataggctgggctcggtggctcacgcctataatcccagcactttgcaaggctgagatgggcggatcacctgaggt<br>caggagttcgtgaccagcct	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	45/48	NA	NA	NA	intron:SLC10A7:NM:001029998:7/12	
0	chr2	115961128	115962942	2000108	0	+	Pygmy124; RIP_L1_chr2_115_01	TAGCCATACACTCTAAAAGG	CGTGTGAAAATTGCTGCTAT	LINE	L1	L1HS	atgctactattctgcaaacaacccttctggtgggaaaatatatttaaaattctagagagagattttattttcctcttatgctatctttttgcaaataatc<br>caaagaatgaaatggtcgtgtgaaaattgctgctattcacattttagctacaaatcagaaaaacatcatttagttgagtggctatcaactgctccattat<br>ctagcctgaaaaaggctctttatcacaggaagtaccattcataggatcggcacttccacaagaattaataatgattacttacaattatgatgacttttaa<br>ataaaaacgaactttattctggttactttttaggtaaatgcttttattttggatatctaactttatcttatttaccagggatttgattcatttttt<font color="green"><u>AAAA<br></u></font><font color="red">CAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAG<br>GACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATA<br>TCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGCCTTTCTTCACAGAATTGGAAAAAACTACTTT<br>AAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATAC<br>TACAAGGCTACAGTAGCCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCT<br>ACAACTATCTGATCTTTGACAAACCTGACAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAG<br>AAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACATTAAACCTAAAACCATAAAAACCCTAGAA<br>GAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGG<br>ATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATC<br>TGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGTGAAGGACATGAACAGA<br>CACTTCTCAAAACAAGACATTTATACAGCCAAAAAACACATGAAAAAATGCTCACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACAATGAGAT<br>ACCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTG<br>GGACTGTCAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGT<br>ATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCA<br>AATGTCCAACAGTGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGG<br>GACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATG<br>AGATCACATGGACACAGGAAGGGGAATATCACACTCCTGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAG<br>ATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATA<br>AAAAAAAAAAAAAAA</font><font color="green"><u>AAAA</u></font>tatgtatctctcatgccatgttgtaaaacaaacaaacaaagaaacaaaaaacataccttttagagtgtatggctattttgg<br>aaatccaaaagaacagtcttttagttacattgcaatgatcggtgattaacgtttaaaatatagtaagtaaaagatatcttatttgaatgaggcaaacaat<br>taataggctaacacagattccagcaaactttttatttaaagaaccagagggtaaatatttaaggctttgcgggccatattttctctgttgcaactactca<br>actatgctgttatagtgcataagcagccatgagcaataaatagatgtagctgtgttctttacaaaaacagttcttagaaagccagattagcccaatgctg<br>tagtttatggacccc	UCSC	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	48/48	NA	NA	NA	intron:DPP10:NM:020868:3/26	
0	chr15	81348690	81348691	2000109	0	-	L1HS516; Pygmy125; AC044907; RIP_L1_chr15_081_01;AC203593	CTCATGTCTTTAGACAACAG;NA	ATGTCCTCATTGTGTTCTAC;NA	LINE	L1	L1HS	agaccacttaggaatggatgcacctgggctgggggagtatgaacacttcctgatgtcctcattgtgttctaccacactgggtcagccccactttgtttta<br>ggcctttgatcccaaatgttgatctgaaccatgatgacaggtggtcagatgcgtttagcttttggggctgtgtcttagctcatgggctgcacctctgtga<br>ctttgggcaggtctagtgcctgagtcctgcctctctctgttggctgggccacatcaagtatattactttgagcttctgagtggtacttctgggccattcg<br>ttcctctcaaagcaggaggctgttgtgggctggaaggggaagccgcctccactcctccccagggaaggagtggatgtgtttcagt<font color="green"><u>AAGAAGTGGCTGGTG<br></u></font><font color="red">GGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTACC<br>GGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCTGAAGCAGGGCGAGGCATTGCCTCACCTGGGA<br>AGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGATCACTCCCACCCGAATATTGCGCTTTTCAG<br>ACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGA<br>GATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGG<br>AGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTT<br>AAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGGACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGA<br>CCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTC<br>CTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACA<br>AAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAA<br>GCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGT<br>TGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAA<br>CTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGA<br>AGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAG<br>TGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAA<br>ATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGG<br>CAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCC<br>AATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGAC<br>AAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAATCGGTACCAGCCGCTGC<br>AAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTC<br>ACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGC<br>TGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAG<br>GGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACA<br>AGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCAC<br>ACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACCAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGC<br>ACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCA<br>CATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAGTCAAACTAGAACTCAGGATT<br>AAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGT<br>TCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAA<br>GAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAA<br>ATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAA<br>TTGATAGACCGCTAGCAAGACTAATAAAGAAAAAGAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGA<br>AATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCA<br>AGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGAC<br>CAGATGGATTCACAGCCGAATTCTACCAGAGGTACATGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCC<br>TAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGAT<br>GCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCT<br>GGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGA<br>CAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCC<br>AATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCAAAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGG<br>AAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGT<br>TTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAA<br>GCATTCTTATACACCAACAACAGACAGAGAGCCAGATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTAC<br>AAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCATGGGTA<br>GGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGG<br>AAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGA<br>CTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATA<br>ACGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGC<br>TAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCAT<br>AAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAA<br>ATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTG<br>CAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAA<br>GGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAA<br>ACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTT<br>TACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCACTTGACCCAGCCAT<br>CCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACT<br>TGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCA<br>TATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGG<br>GAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGATGGGGGAGGGATAGCATTGGGAGATA<br>TACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAAC<br>TTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AAGCAGTGGCTGGTG</u></font>tagaatggactcagctcattttgagcaaacgccacatcagattcagcttc<br>tgtgtaaactgtgggcagccaaagagcacaggctctttgagaaggaaagctgtggccaacagcttcagcagctgtcattccatgccaggcacagccagct<br>cctctgccctgtccaagcatgtgtcacgctctacctggggagggatgcatggacagcctctcctccttctggaagcagttggtgctactcatctcaggaa<br>gatctgtactcagacctgttctttattcttaaaacacgaagacatttccttcttccccgggacaatgtttcatgtgtcagttccagctgttgtctaaaga<br>catgagtgggtgggaaaacttcagtgtgttgcctc	Other;OTHER	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Badge RM, Alisch RS, Moran JV. ATLAS: a system to selectively identify human-specific L1 insertions. Am J Hum Genet. 2003 Apr;72(4):823-38. Epub 2003 Mar 11.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12632328">PMID:12632328</a>.</LI><LI>Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R,Wilson RK, Eichler EE. A human genome structural variation sequencing resource reveals insights intomutational mechanisms. Cell. 2010 Nov 24;143(5):837-47.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=21111241">PMID:21111241</a>.</LI></UL>	E:Retrotransposon display:ATLAS; E:Insertion-specific detection:PCR;E: fosmid-end sequencing	NA;NA	60;NA	6151;NA	101;NA	NA;NA	intron:HOMER2:NM:199332:2/9;intron:HOMER2:NM:199332:2/9	
0	chr14	29924376	29924377	2000110	0	+	Pygmy126; RIP_L1_chr14_029_01	GTCCAATATGCCATAAGTAG	CCTCTGTATTCAATGATTCC	LINE	L1	Ta-1	gataaagatattgacaaattatagatttagacaggaattgatttagatgtagatataggcagttggatttgtggctcccgagttcaagagatgaggtttt<br>agctggagaaagtgtggagaaatctgttctctccagaagggtggttgaaacaatggggatgtaggtgagatcagcctgtaggagtatgtgaagaaagggg<br>ttttacagcctttgtttttaatccactccgtaattcatcaatttgttaacctcctctgtattcaatgattcctaaatatctactccactttcacacttgg<br>agtcaatattatttcctctcatttggtgctcctattggtcaagggaacctccaaaagcccacacaagccatgggaagtaagatccactataaatatgtcc<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>tattataatgaatttatttgttatagttctactgtgaaggcttaagattaccaaatgactatctccttagaagtataaag<br>caagcatagtaagctaagagtcagaatccccttttgtcaactctgacactacttatggcatattggacaaatttttgcaatagctggttactgaggttga<br>tgctctcattatgaatacagtacaatgtattgttttgctctttaagcaatcttatatacacagacatgaaattatcaaaaatgcttttaatccatttcag<br>tgcatgtattataatacactaaatatatttccttttttcatcacagaaagtcaaaagatctgtttttcttgtagtattcataaatgaccttaaaactgac<br>ccacatataacctactaatt	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/48	NA	NA	NA	intergenic	
0	chr10	117375172	117375173	2000111	0	+	Pygmy128; RIP_L1_chr10_117_01	CTTTATACTGACAGAGGAAC	TTTCTTGGCATAGTTGCTTG	LINE	L1	Ta-1	ttgtatggatgaaactgaaaatggaagagttgtcactgtaaattttttgagctgatagaaatttctgatggaattttttactttggaaattttcaaaaat<br>actaagaagcaaataataatttgtatttccacactcataatttaatgctattaatttcttggcatagttgcttgtagttttataccttttttgttaagaa<br>aaatcactattgttgctgaaaaatattacacatgtgtattgaaaatattcaaacaaaaaagtttagaaaagaaagaaaaaatagaccatgaatattctat<br>ctggaaagttttatccataacattctagaaacacctttgcaggtgttttatctgtacataaatacagaaaaatgagggttcaaagaaaggaaacttcaca<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>cattcagtccctgagttcctagaactccattcatgcaatttaatcaagaacctattcccagaactccattcatgcaattt<br>aatcaagaacctagaattggatgccaaggcgcataggaatgaccctatatgcttatatttccaacctcaatgaacaaactcttctttctctagatgacat<br>ttccaatcctccaaatctaagcccctcaagcagccccaacttgttcgttcctctgtcagtataaagattatccttgaatgcatacccttacttaaacaat<br>cctcacactttccccctcatctcctgaattttctccagcctgccttgcagagtaaatattttactaataataatttgtactacatggtatatctccatgc<br>cccctgaaactggtattgac	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/48	NA	NA	NA	intron:ATRNL1:NM:207303:26/29	
0	chr4	167913624	167919642	2000112	0	+	Pygmy129; L1HS118; RIP_L1_chr4_168_01;AC216081	GAAAATGCCAGAAATACCTC;NA	TCTAAGTGCAATTCTCTCAG;NA	LINE	L1	L1HS	aactattttaaaaatttgctttcaacaattcttattttgagggattcagtgagctctcatatgtatgttgcttatctagttgttgtttaattttctcttt<br>tctactcattacaagtgaaagtaaactaataactcagttatttgcatggaaaagaggatgtattggagacatggggacttatgaaaacagtatcaaaaag<br>atgtaatcttcaacaacagggtttgaagagtagtttaaacatttctaagtgcaattctctcagattttgtagctaattttatgttctagtaatacaaaat<br>ctattttgatagttttttttcttgttatactttgaattataaaaataatagaaataaaaatgtagacacttaggattaaaaatt<font color="green"><u>AAATAAGAGATTTGGG<br></u></font><font color="red">ACAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGT<br>GCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTT<br>CCCTTTCCGAGTCAAAGAAAGGGGTGACGGTCGCACCTGGAAAATCAGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCA<br>CCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAA<br>CGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAG<br>GCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCT<br>TTGAAGAGAGCAGTAGTTCTCCCAGCACGCAGATGGAGATCTGAGAACGGGCAGACAGACTGCCTCCTCAAGTGGGTCCCTGACTCCTGACCCCCGAGCA<br>GCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAA<br>AACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACA<br>GAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAATGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGAT<br>TTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAA<br>ATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAG<br>AAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGA<br>ATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAA<br>CCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACA<br>AAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGT<br>CGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTA<br>AAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGCAAATGCTGAGAGA<br>TTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATG<br>TAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAA<br>CTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCA<br>TCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTC<br>TCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCC<br>TAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGA<br>CTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATA<br>GACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAG<br>CTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAG<br>CCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAACGCAGAAATAAAGATGTTCTTTGAAACCAACAAG<br>AACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGAT<br>CCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGC<br>AGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCA<br>AGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCA<br>GAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGA<br>AGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCC<br>GAATTCTACCAGAGGTACATGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGG<br>CCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAA<br>AATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAA<br>TCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCT<br>TCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGG<br>GCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCA<br>ATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTATATCTAGAAAACCCCA<br>TCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAA<br>CAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAG<br>GACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATA<br>TCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTT<br>AAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATAC<br>TACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCT<br>ACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAG<br>AAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAA<br>GAAAACCTAGGCATTACCATTCAGGACATAGGCATGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGCAACAAAAGACAAAATTGACAAATGGGA<br>TCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACATCATGGGAGAAAATTTTCGCAACCTACTCATCT<br>GACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGAC<br>ACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATA<br>TCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGG<br>GACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGACATCCCATTACTGGGTA<br>TATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGACCCAACCCAA<br>ATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGG<br>ACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGA<br>GATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGA<br>TGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAA<br>AAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AAAAAAGAGATTTGGG</u></font>ggcttgaaaaatttacaatttcacaaacttttgggaatttgttaattttcagaagatatttaatg<br>ctcatatctgtgaatcaccatattagaaaatggtaatacaaaggtaaaagaggtatttctggcattttcataaaagtattaaagaatttcagtgtttttg<br>ttgttgtttaaattctcttgtaaaattgtttatagaatcaaaacagagttatctcactcaaacaaacagtaaacatgaattccttatttcctattttctg<br>tgcaagtgctcaccttggttctggaaatgtaaggttaaaaatgtagattaggtccctattaccttgaagcaaatttttaaaatagtatattttgagatac<br>tgatttaaactattctaat	UCSC;UCSC	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R,Wilson RK, Eichler EE. A human genome structural variation sequencing resource reveals insights intomutational mechanisms. Cell. 2010 Nov 24;143(5):837-47.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=21111241">PMID:21111241</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR;E: fosmid-end sequencing	NA;NA	50/48;NA	NA;NA	NA;NA	NA;NA	intron:SPOCK3:NM:001040159:7/11;intron:SPOCK3:NM:001040159:7/11	
0	chr3	81008004	81009292	2000113	0	-	Pygmy131; 3917; RIP_L1_chr3_081_01	CTCAAAATGTTCATGCATAG	GGTAGCTTCAGAAAGTATTC	LINE	L1	L1HS	aaaacacaataggtttaatataatagctgctcaatgggactgagtagtcaaccagggattcttgatattcttgatagatgtgtttgtatgtgcttgtaag<br>ctcctgggcagagaaagaagacatcacaggaataggagttatgaaagattaaaactataatagtaatgcacaacacaattgttatgaaatagattcaaac<br>aataaaggaatctgtggtctacatccacttgcctgcccaaagggaattttgttcttataagatgacatgtacaccaccacatcttgtttcacacagataa<br>acattttatacaggtacacacagaacatacatgtacttatacacatttttacatttatgaggtcattaaatacacatgattgtaacacatgcttt<font color="green"><u>AAAGC<br></u></font><font color="red">AATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAA<br>AATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGC<br>AAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAA<br>CTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAA<br>ACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACAC<br>ATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGT<br>CAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTG<br>GCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGAC<br>ACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGC<br>ACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACT<br>ATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGG<br>GGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCAATGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACAT<br>GTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AAACC</u></font>tttttt<br>tgaaattttgtggaacattctgctttgctgtttataacagttccatgctattctatatcatgacatattatttgaagcctctcctattgatttatattta<br>tattgtttctaaatgtttatagaagcaaaaaaaaaaagaattttttttaaaaacctgcatgtttgtttaacaagaaggtacttttataggaagggtttct<br>cagtattgtatttactatgcatgaacattttgagttttaaggtcagctggttaatgatggatttccttgtagaaatgatataaatttcctggttcaccag<br>cattttatcaaattcctagtttctctgtattttaaaacttttgcaaaagagtgagcaaaacaaaatacttattgttcatatttgctttt	UCSC	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Bennett EA, Coleman LE, Tsui C, Pittard WS, Devine SE. Natural genetic variation caused by transposable elements in humans. Genetics. 2004 Oct;168(2):933-51.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15514065">PMID:15514065</a>.</LI></UL>	C:Reference; E:Insertion-specific detection:PCR	NA	48/48	NA	NA	NA	intergenic	
0	chr3	79299044	79299045	2000114	0	-	Pygmy132; RIP_L1_chr3_079_01	ATGATGACAGTCATTACAGG	GGATAGAGGAATAATATTCC	LINE	L1	Ta-1	agtggtgtgaagggaagtaactagttgggacagataaaaaggaaagtgccctcttagaaggcaattgcatagttttatcatttatatgaagacagtagcc<br>ccaaaatgatgacagtcattacaggtgttataaagatataagttataggaatttagaagaaaggaacagtgacattgatttcatgacaaaaatacaatgt<br>ggatgtacacaaagaagttttactagaacagaaggctaaattctctgtgttcctcttgctaaggaagaaattgctgccttgcaacttctggaattttgtt<br>ggcacaagcaaacaaaaatagtgaagagtaaacaaaaaaacacaaaaattttaactgcaagaaaatttactagcgtgagtttagatgctctggatgaatt<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>aggaaatgcttttgtgctattaattttcaaacctaaaagacctttcttcaattttataatcaatattatcagcagtatct<br>tgacctgggaaaaatgaagtgtttggcactggttgtgtcttttaggaaacatgattaggacatgatttgaaattgagtagccagaattctgacagtcttt<br>gttcttaacattggagacacgtggatatgtgcacatcgcctcaggcatagtgaatagcagtagcattaattcagaagcctaagaagatgtctttggaata<br>ttattcctctatccataaaactgttaagtgattcattaattcaacaaatattatgaatcctttactgatttaggcactgataatacattagtgaacaaat<br>taagaaaaatagcggatcaa	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/48	NA	NA	NA	intron:ROBO1:NM:002941:2/31	
0	chr11	26374254	26374255	2000115	0	+	Pygmy133; RIP_L1_chr11_026_01	GCTATGAGGTTAGATCTTAC	TACATGGTTGTTGATCTCAG	LINE	L1	Ta-1	tggctagccatatacagaaaactgaaactggaccccttccttacaccttatacaaaaattaacgcaagatagattaaagacttaaacgtaagacctaaaa<br>ccataaaaaccctaagaatacctaggcagtaccattcaggacataggcatgggcaaagacttcatgactaaaacaccaaaagcaagggcaacaaaagcca<br>aaattgacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaagctatcatcagaatgaacaggcaacttacaggatgggagaaaatttt<br>tgcaatctatccatctgatgcagggctaatatccagaactacaaagaacttaaacaaatttacaagaaaaaaacaaccccctcaaaaagtaggcgaagga<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>tatgaacagacacttctcaaaagaagacatttatgcagccaacaaacatatgaaagaaagctcacaatcactggtcatta<br>gagaaatgcaaatcaaaaccacaatgaaataccatctcatgccagttagagtggtgatcattaaaaagtcaggaaacaacagatgctggaggggatgtgg<br>agaaataggaacacttttacactgttggtaggggtgtaaattacttcaaccatttacacttagaagacagtgtggcgatccctcaaggatctagaaccag<br>aaataacatttgacccagcagtcccattactgggtatatacataaagggttataaatcattttactataaagacacgtgcacacatatgtttattgcagc<br>actgttcacaatagcaaaga	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/48	NA	NA	NA	intron:ANO3:NM:031418:1/27	
0	chr1	195767144	195769894	2000116	0	-	L1HS332; Database37; 238700; RIP_L1_chr1_194_01;AC231538	AACTGGGATCTATGATCATC;NA	ACAAGAGTTCACATTCTGGT;NA	LINE	L1	L1HS	aagttttggtttttaaaaagttgcttatgaattacccagtcattccaaagaaataggttagatgttttagatccacaaatcttttcagtgtcacaagagt<br>tcacattctggtggaggtacctagcagagacaaagacttttgttttggaagacagaaatttagttttcttcatttagtcttttctgtgctgtttctatta<br>tttgaaatgctcagtctcattaatacctctctcaaagacagcttagtttactagctgttgaacctcattaaaaaaggtgaaaacaggtacaagtggaaat<br>aatatacactcttttcttcctactgtaaggctactgaagagtagcatcactgtcatgttagaactggctcaagtatccaaattctttt<font color="green"><u>AAAAGATTTGTT<br></u></font><font color="red">TTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAG<br>CCCTTTGTCAGATGAGTAGGATGCGAAAATTTTCTCCCATTTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGT<br>TTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGC<br>CTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAG<br>TTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATC<br>AGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTG<br>TAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCA<br>TATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCC<br>ATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCT<br>TGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGT<br>TTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGG<br>GCTGAGACCATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCT<br>CCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTC<br>CAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAGATACGTCCCATCAATACCTAATTTATTGAGAGTT<br>TTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCCTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTA<br>CATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTT<br>TGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCTGGCTTTGGTATCAGA<br>ATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCTTCCTTGTACCTCT<br>GGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAG<br>AAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACC<br>AGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTA<br>GTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATG<br>AGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAAT<br>GATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTACGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAA<br>TTGGAAACCATCAGTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGAC<br>ACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTTGGGGGAGGGGGAAGGGATAGTATTGGGAGATATACCTAATGCTAGATGACACATTAGT<br>GGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAATAAAAT<br>AAAATAAAATAAAAATAAATGAAAAAAAAAAAAAAAGAAAAAAAAAAAAAA</font><font color="green"><u>AAAAGATTTGTT</u></font>atgtggtgaatttaattgcctaaaggcaaatttctgc<br>agggacctttgtgatttttgtaatctagataattttcatgttcctactactatttttcaaacttcaatttttatacagttgaaatagtagaaaaatgccc<br>tagagcagcctcagaagacctggaaaagatggacagttttttgataacagtgaggctgtctgtgtatgtttgtatttacgtgattcatttaaaacttcca<br>acaatccagtcagggcaagaattattatccgcgtttttcagatttagaaacaaatggagactaataaatgtgcccagagttctacaagtaataaatagca<br>gaataggaattaaaaagcaggcagactgattctagaacttaggtacctaac	UCSC;UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Bennett EA, Coleman LE, Tsui C, Pittard WS, Devine SE. Natural genetic variation caused by transposable elements in humans. Genetics. 2004 Oct;168(2):933-51.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15514065">PMID:15514065</a>.</LI><LI>Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R,Wilson RK, Eichler EE. A human genome structural variation sequencing resource reveals insights intomutational mechanisms. Cell. 2010 Nov 24;143(5):837-47.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=21111241">PMID:21111241</a>.</LI></UL>	C:Reference; E:Insertion-specific detection:PCR;E: fosmid-end sequencing	NA;NA	58;NA	2850;NA	87;NA	NA;NA	intron:DENND1B:NM:001142795:19/22;intron:DENND1B:NM:001142795:19/22	
0	chr6	110583439	110586460	2000117	0	-	Druze51; RIP_L1_chr6_110_01	ACCCTGAAATAATCAGACTC	AGTAGCTGGTTCTAATCTTC	LINE	L1	L1HS	ggttaataataataattactagcatagaaaaatagaactctgaattcagaggaaggactaactcaccatgaactgggtttatcaagaaggttttcatggc<br>aaaggaaggattcattcaggacattgaaggattaattggattgagctagatagggaagaaagtagacatccattctaaatagaatagtagctggttctaa<br>tcttcattcttaactccaacatgaatcatatctttttttaaaaaaaattgctatgcttatggagttaacattgactcagacaagtcacctgagtgaatta<br>ctcacttattttatcttggggtcaaagaagctcatgtgagggttcctcattccctaagattctccttttatataagattgt<font color="green"><u>AAACAAGAAGGCACTTTAG<br></u></font><font color="red">GGGAAGAGCCAAGATGGCCGAATAGGATCCTCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCA<br>AGACTAATAAAGAAAAAGAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCA<br>GAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGA<br>AGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCT<br>GAATTCTACCAGAGGTACATGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGG<br>CCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAA<br>AATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAA<br>TCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCT<br>TCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGG<br>GCAAAAACTGGAAGCATTCCCTTTGGAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCA<br>ATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCA<br>TCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAA<br>CAACAGACAAACAGAGAGCCAGATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGAAATCCAACTTACAAGGGATGTGAAG<br>GACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATA<br>TCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTT<br>AAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATAC<br>TACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCT<br>ACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAG<br>AAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAA<br>GAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGG<br>ATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATC<br>TGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGA<br>CACTTCTCAAAAGAAGACATTCATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGAT<br>ATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTG<br>GGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGT<br>ATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCA<br>AATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGG<br>GACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATTGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATG<br>AGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAG<br>ATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATA<br>AAAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AAAAAAGAAGGCACTTTAG</u></font>aaataatgtagtcctacctgtaatctcttctagaggcaagtaatttccttattggaaat<br>gtctggtataaaaagattttttttctgttcaaattaaatgtcttctcatcactttaagctattgatcctagatttgctttcaaagaactctcttaatctc<br>attccaagccaggaaatgataatggcaaaatagtttaaccaaatctacctttttagtttctgttccagtttgtgcttatagccgataaaaagcatactta<br>ggtgtacattatgatggtatattggtatatcgaggccaaaaataatgcttaagagttactgaattagtaagagccctgatacttagggagaactatagat<br>taagtaaatctatattgattta	UCSC	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	48/48	NA	NA	NA	intron:WASF1:NM:003931:3/11	
0	chr6	162101226	162101227	2000118	0	+	Druze59; RIP_L1_chr6_162_01	TGATGTGACTCAGTTGACAT	GGTCACAATGTCAATTGCTA	LINE	L1	Ta-1	tgggttttagggttccccagatttagaaatatgtacacctgaacataaaactgggttcagttttctgaagtctgaccaatgagctgacatactgatagct<br>cactgaggtaaaagaagctttgtgatacaactgaaggatgtttatactttcagtgaacgaggcatagcagcctaaatgcaaccgattgaaccacaaataa<br>tacttctcaatcaaatggccttttatctttcttgtctctaaatatacccttttaccacacagctcgttcttaaaaaaaaaaaaaatccggtggtcacaat<br>gtcaattgctaactttattttctatttatatcgtccactttatgaatacccttttcctcaatttaattagttagtgtcactcacactttaactgggaaca<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>ttgtaagactgagctgaatttgaaaacaatgccacgatgtcagactgagtcacatcaattttctaactgcccaccacagc<br>cacagcgcaactcaacgacacccacacgggtatctgcgtcctggaattggacttttacatttttattttaatgaaaatgatgtattacatataagtaaaa<br>caacacctttaaagatggaaaagaccctttttttcaagcctcaatttcagttctagtgggacagccaggtgggagggggtccctggagaaactccaacca<br>gcctgccctctgcagtggggaggagcctggcccctcctcctcctgtgtggaacccgagattcaggctgagcgccggaagccgtctagcagggactctggc<br>ctagcgagagtccctgtttc	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/45	NA	NA	NA	intron:PARK2:NM:013987:6/11	
0	chr8	18498901	18500224	2000119	0	+	Druze62; RIP_L1_chr8_018_01	CCTTTTATGCTGTACTGAAG	AAACCAGAAAACAGTACTGC	LINE	L1	L1HS	aattgggaaacctagaagaaagggataaattactagaaacctacaatctaccaagatgaattacggagaggtagaaaatctgaatggatctgtaataata<br>aggggattgaatctgtaatgaaaaccctcccaacaaaggaaagtttaggagcagatggcttcaccagtgaattctacctaacagttaaacaactaatgcc<br>aatcattctcaaactgttccaaaaaattgaagaggagggaacacttccaaactcattttatgaggccagcatgaccctgatatcaaaaccagaaaacagt<br>actgcaagaaaactacttgccaacatccattatgagcataaatgcaaaaactctaaacataatgctggcaaactgaattcaacagtacatt<font color="green"><u>AAAAGGATC<br></u></font><font color="red">TACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAACAATGGGGAAAGGATTCCCTGTTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTA<br>GAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGA<br>AGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGG<br>GATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCAT<br>CTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAG<br>ACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGA<br>TATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGT<br>GGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGG<br>TATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCC<br>AAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAG<br>GGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAAT<br>GAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTA<br>GATGACACATTATTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAAT<br>AAAAAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AAAAGGATC</u></font>atatacaatgaccaagtgagatttatccttgggatgtaaaggtggttcaacatatgaaaatcagtca<br>aagtgataaaacgcattaacagatcaaatgataaaaattacacaaacatctcaatgatgcaggaaagcgatgatattaatatcctttcatgatttgaaaa<br>accctcaaaacagatacagtttcaaatgatcttatatgtagaaaacccaaagattccccaaaaacctattagaataaataaattcagcaaagttgcagga<br>tacaaaatcaaccatcagttccatttctatatgctaacaatgaacaatctgaaaaggaaatgaataataccatttacaacagcatcaaaaactattaaaa<br>aatacttaagaataaacatgatca	UCSC	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	45/50	NA	NA	NA	intron:PSD3:NM:206909:9/13	
0	chr10	110442952	110442953	2000120	0	+	Druze87; RIP_L1_chr10_110_01	CCATCTTGGAAAGTGATTC	CATAAGTCAATTTCTAGCTC	LINE	L1	Ta-1	aggaagatgactgggtaggaagcaccaggaatctatctcccccttacataacaattaagcttgcagaatctgccttatatgactgttttggatctatgga<br>gtctattaaagccttgaagcttccaagagaaggcttcaacactcagttgtggttaactttggtcaatttcagcttttagctcaacagcagctactacttc<br>cccatgcacagccccatggcaggcaccggtgcatgtgctcctgaagcagcttccatgcatatcgtaggaactggggtgtgggacagcaataaagacctgt<br>cttctaaatattggggatctgtgttctgaactctgattgctgtttctaatcactgaggcctaagccagaggtgagcagctattattgtttcacacccccc<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>cattaaaacaaacccaattcccttccgttgaatgacgttgaggagattgaaatgtccactgccttttttttttttatcac<br>tttcctttttctctttttcttctttgtggagccaaactacactaggacattgaaaagcaactgcatactttggaacattttaaaaattactgtgcatacc<br>caggcaaaggctcatgctcagaaaacacctgaagagaatttaagtttacacctcaggttgatcatcagcacagagacagcctacagaaattgaaaacaac<br>aagtcctggagaaagaggagaatctgattttcagagctgccacattattagttcagatgtccagttttcaacaacaacaacaaaactacggggcatacaa<br>ttaaattggaaagtgtggcc	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/48	NA	NA	NA	intergenic	
0	chr10	18583817	18583818	2000121	0	+	Druze90; RIP_L1_chr10_018_01	CAAGAGGCATGATCAGATTT	TTTCAGTTCTGTAGAAGCTG	LINE	L1	Ta-1	aataaacaaatgttgccactctcattactgagaaaaaaaaatgattgattgttggtctgaaaaacaaaacaaaaaccaaaaaaaatcccgtacatcaaaa<br>gacaacccagacactttggtgagaaataaaggaaaattagagaaaggttttcagttctgtagaagctggaatgaaatagagtgtgcattttggtggctaa<br>agaagtggagttcagtggaagctgcaagcagccagatagagattttgttcaggaccctaaggagagaaatgaggactggaccaagaaatagaagtacact<br>ggcactgacatgaaaacaaaggtttatcacagatcggattactgaagactgaacttcagaaatgcatggaaatgttcaggaatgagagaacacgggaacg<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>tgtatgtattacattgggtttcattttctgtttctgtccttgcacttacctacttgaattccccaatatctaatagattc<br>attcattttccttatctcccatcttcagctccttagcatgagagcatcatcttttgcttgggtaaaagtacttcctagctgatctccctggcttctctct<br>agccgtcttccaatctgtcttcaactgtcctgccaaagtggattttaaatggcacaaatctgatcatgcctcttgtgggaaagaaatcccactgctctta<br>gtagaaagagaaaagatccccagcgtggccctcatgatcttgcctgataatcacctgcctctctaacctcatcttctcctccctctcttactttattctc<br>caactgcttaagctgggcct	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	50/48	NA	NA	NA	intron:CACNB2:NM:201597:2/14	
0	chr15	98748763	98748764	2000122	0	-	Druze91; RIP_L1_chr15_098_01	AAAGGACAACTCGCTCTTG	GTACTTCCAATACCAAATTG	LINE	L1	Ta-1	attatactcaaaaacattcatgcttctttttataacttacataggttgatgaaccctttgctccatctggtatttattttggtgtaagaaatgaggtaaa<br>taggggtttttaaaaatggtttgctggttgtccccaaggcatttgctgagcatttttttcttttcctttgtgctttgcaatgccactcttaaattatttt<br>gtgtctcttgtctctttctggacttcccattctgtttcaccgaagtacttccaataccaaattgttttaattagtacagccttataataggttttcttat<br>ggttagatcaataatccgtttttcctcttgtctttcccaatattactggcccattcaacatctttatttgatttccaatatttattttattccaagctag<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>aaactggatgaattctagtttttgttttttgttaggctcctctcaaaatcccaatggtgtgctattttaagattgcttta<br>aatttatacacttagaagaacggacaatttatcatattgagtattcccatcgaagagcgagttgtcttttcagttaaattctttatctcttagtaaaata<br>gggaattttatttgtatacaccctgaacatttcctttaacatttcacggaggtaattttctctttgattattattgtgaataaaatctttacttcctttt<br>attttttttaatacttagaaaagctattgatttttgtatgatagctgtgagatatgcctctccgctcaagtttctaataggttttcagcaattttggggt<br>tttctatgtatagaaagtca	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/48	NA	NA	NA	intergenic	
0	chr1	74757118	74757841	2000123	0	-	Pygmy130; RIP_L1_chr1_074_01	AATATGGACGATTTAAGGAG	GCTTTGGCTTGACTATAACA	LINE	L1	L1HS	gaaaatggcagtatccaaaggagaaatagctgtaagaacatgctgtccagtcagggcatccagagcagagaaggtggatctgtgctcccacagataggac<br>acccacactgccacagggaccctgtggactattcaatcttcccttcacctctgaatgacacacattataaacttaaagctttggcttgactataacatat<br>cttcattataggtacttgtcctcacattagaaaaatttcatgtataaaatgtaattttcttttaaagatatattctgtggggttattttgtaagactatt<br>tactttataaaaaagattcttagaagtttttatctctattctggctttcttatgattttagtttaaaaatcaattcaaaaattacacttt<font color="green"><u>TAAAGTAAGG<br></u></font><font color="red">CAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATT<br>GTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCA<br>TGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTAGAACCAACCCAAATGTCCAACAATGATAGACTGGA<br>TTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAATATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCAT<br>CATTCTCAGTAAACTATCACAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGG<br>AATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGAAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGC<br>ACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAGGGGA<br>AAAAAAATAAAATAAAATAAAAAA</font><font color="green"><u>TAAAGTAAGG</u></font>taatttgttttaaattgaagactaaatactccttaaataatccatatttgtaaatgttgttttaaa<br>aacacaccctttacttatggaaataaattatataaaagcaaaatatgtgttcaaaacactaatataataattttgagcttaaaaaacagatattgttttg<br>aaaacactattagcgatgcattatgaagcctctgcactgacagtgtgctccccaggcaggcatcaggtgaaacacgggaaccataagcttcgtcacgatt<br>agtagaatccactgagatctgtaagcagtgggaaccatagagccaccctaaaaagaaggcatattgaggtgggagaatcagagatccttgaggtaagaaa<br>agcatctcagaagcaaccaagagt	UCSC	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	48/48	NA	NA	NA	intron:TNNI3K:NM:015978:23/25	
0	chr6	153071684	153075482	2000124	0	-	52577; Druze95; L1HS461; RIP_L1_chr6_153_01;AC214249	TGAATTCTGTTTCACCTGAA;NA	AAACATCAAGCTAGGATTCC;NA	LINE	L1	L1HS	aaaaatatttaacaaatgtgcaattataatcccccaaacagaggaaagggtggatggagctaaaaacattttgaataaatgaggctgaaatttttcaaaa<br>ttagtgaaacaaattaatctacaaatcaagagtctcagtaacatcaagcagaatatatataaagaactatgcacgtcatagtcaaacagctgaagatcaa<br>aggttaacaaaaaaaacttgaacacagccaaattacaaataataataacattacattcataaaagacaattatttaaatactcacttttaataagacacg<br>gtgatattttaaagtgattttaaaaaagctgtcaactcagaattttatatccagcaaaagtatcccttaagtatagtagtg<font color="green"><u>AAATAAATACTCTTTCAGG<br></u></font><font color="red">GGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGGGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTAC<br>CGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGG<br>AAGCGCAAGGGGTCAGGGAGTTCCCAGGAATTGAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTC<br>TCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATG<br>TAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGG<br>AAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACAT<br>ACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCT<br>AACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATA<br>GAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAA<br>AAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACA<br>CCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAAT<br>AGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGT<br>ACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGAT<br>ACCAAAGCCAGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGA<br>ATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCC<br>AGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCT<br>CAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCA<br>TTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGG<br>AAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAA<br>TCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAG<br>AGCCAAATCACGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGA<br>ACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCAT<br>ACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAAC<br>CAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGTTACAGTAA<br>CCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTT<br>TGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGAT<br>CCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTA<br>CCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAA<br>GAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGTGCTAATA<br>TCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAG<br>ACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGT<br>TAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTT<br>CAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCGTTACTGGGTATATACCCAAATGAGT<br>ATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGGT<br>AGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTG<br>GAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACA<br>GGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGG<br>TGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAATAAAA</font><font color="green"><u>A<br>AATAAATACTCTTTCAGG</u></font>tgaaacagaattcaaattaatcaccagcacacctacactaaaacatgtgctgaagaaaatccttagtctggggataatgaaa<br>actgggatctttaagaagaaattgagaccatcagaaatagtatcagagtaaatatagaagactcttttccatcaatttctttaaaatatatttttctagc<br>tagagcaaaaattaaaatattttcatatgaaatgtatagtttatatagatttaatatgtaataattataatacaaagaattgggacaggatataaataaa<br>tctattagcttgattgattgatttagtttttaagagattttagagacagggacttactatatcatccaggctggtctcaaagttttgggctcaaatgac	UCSC;UCSC	<UL><LI>Bennett EA, Coleman LE, Tsui C, Pittard WS, Devine SE. Natural genetic variation caused by transposable elements in humans. Genetics. 2004 Oct;168(2):933-51.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15514065">PMID:15514065</a>.</LI><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R,Wilson RK, Eichler EE. A human genome structural variation sequencing resource reveals insights intomutational mechanisms. Cell. 2010 Nov 24;143(5):837-47.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=21111241">PMID:21111241</a>.</LI></UL>	C:Reference; E:Insertion-specific detection:PCR;E: fosmid-end sequencing	NA;NA	48/48;NA	NA;NA	NA;NA	NA;NA	intron:MYCT1:NM:025107:1/2;intron:MYCT1:NM:025107:1/2	
0	chr1	191816264	191816265	2000125	0	+	Druze88; AF417139; RIP_L1_chr1_190_01	GAATCGAGTATTTCTCACTG	TCTTCTCACATGAGGAAACT	LINE	L1	Ta-1	cttctcacatgaggaaactaaagtgaaaacaagctaattaatctccaaattatatcctgaaatgaaagcagatgcacgttactgcaaagcatatctttcc<br>ttggtcctcactgaagttgccttaaggagaggcgtggaagaggccactatggcaatcaatgaacaaaatcatctgtaattttaaatggaaacaaattgat<br>atcccacatgaatggttttctttttccctgcaatacaatcttgacatattacagcaatatcttgaggagtttattttggggattaagtacaaatagcaat<br>gcaaacctgtaaccatagtctagtgcccaaagagaccacattttgtgttgaaataatacacaatagagaaagctgaatgggtaaaataaaatccttcttt<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNNTGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAATGAAAAAAAA<br>AAAAAAAAAAAA</font><font color="green"><u>nnnnn</u></font>aagaaaaataatctcttctctgagttattaaagtttgcagcctccttggttttcgatgagcttatttaaaatctacgggggga<br>aaattagcagcttaaaatgctgacagcatgaaaaaacagtgagaaatactcgattcttcaaggagtccttccttcaccccccaaatagtttgatttttcc<br>tatttatctcctttgtcttttgataaaaagaaaagaaccctttgagaggacaattttgaggtcttaatccatacttctttccagtttatcttttacattc<br>aaaacaaacacctttaaaagaatcctttttggtctggtagtgctaaatgctaagcttaggtatcagcagctaattagcttcacatctggggggattgtca<br>atgaactctatctcctg	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI><LI>Ovchinnikov I, Troxel AB, Swergold GD. Genomic characterization of recent human LINE-1 insertions: evidence supportingrandom insertion. Genome Res. 2001 Dec;11(12):2050-8.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=11731495">PMID:11731495</a>.</LI></UL>	E:Retrotransposon display:L1 display; E:Insertion-specific detection:PCR	 TSD unavailable	50/48	NA	NA	NA	intergenic	
0	chr2	180708400	180708401	2000126	0	+	Pygmy127; RIP_L1_chr2_180_01	AGCATAAGCCATATAAGTCG	GAGACATATTGGTAAGAAGC	LINE	L1	Ta-1	tttcccttaagcatttttcacagagatttcccattaggtactctctctttctcctactagtctgtgagtacctagaagactgaatgtatgttgtatttat<br>atttctaactctgaaccagcacagttcctggcacttgttactatgtcattggtacctgttaaataaatgactgactatgctgcatatgaataggcaatac<br>acacaaatggactgggataaaggtgtgagcttctcaggtgtaggctggatggtgttatattaatattctggttgccttgccatgtgttgggcacagaaaa<br>agtgctcaataaatactcattgaatgtacttcttgacaagacttcagcaggctgctcactgcagcctcaacatcccaggttcgagccatcctcccaacta<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>agcctcccgagtagctggtactacaagcatgtgctgccacaccctgctaatttttgttttgttttgtagaaacagggttt<br>ctccatgttgcccaggcttgtctcaaactcctgagctcaagcaatccgccagcctcagcctcccaaagtgctgagattacaggtgtgggccactgtgcct<br>ggctcaccaagtaaatttttaaaggatatattaatgttaaagtaaaaagtattctgtaagagattgggaactattttaaaaagagagagattcttactgt<br>agtgaaaatttgtatgtagttccccaaagaataaaatcagcaaaattcccagatgtgttttcagggttctttgaggatttctgatccgaaggaattagaa<br>aggttagaaaatataggtct	Other	<UL><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	48/48	NA	NA	NA	intergenic	
0	chr6	29970892	30028191	2000127	0	+	AC004200; RIP_L1_chr6_030_01	ATTTGCGGCCGCCAGGATGCCATGAAAAATAGCC	GCATTACTGTATCAGCCTGTAAGCG	LINE	L1	L1HS	caaagaggaccaggatgccatgaaaaatagccttggctagaaataggtcatttgatccttggctaattggcatctctctacattctctggtatacaatgt<br>tcaatctgatgtgcaaggcaattgtatctcgcaaagaatttgagaatttgatatgttgctcacattttaccacacatacaagtgaattaaacttttacag<br>aatagaaaaaaccattgtcgagcaaaataaattaaatgaaaagacataaaggaataactagtgatgaaatagcaataagaatggaaaacacaaaagagct<br>gcttttaaagcaatgttagaagcacaaaataactgcatttttcagaatcatactggagtccaaatcacttctaacacatctaatt<font color="green"><u>AAAAAACACAGTGAA<br></u></font><font color="red">GGGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTA<br>CCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGG<br>GAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTC<br>AGACCGGCTTAAGAAACGGCGCAACACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCT<br>GAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGT<br>GGAGCCCACCACAGCTCAAGGAGGCCTGACTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGAC<br>TTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCT<br>GACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGG<br>TCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCA<br>CAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACA<br>AAGCTGGATGGAGAATGATTTTGATGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAA<br>GTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAG<br>AACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGG<br>GAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAA<br>AGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGAGATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGG<br>AAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAG<br>GGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGG<br>CCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAG<br>ACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCT<br>GCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAAT<br>TCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGT<br>GCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGC<br>AGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAA<br>CAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCC<br>ACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCT<br>GCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGAC<br>CACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGA<br>TTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGAT<br>GTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTAC<br>AAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAG<br>AAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAA<br>AATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACA<br>GAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCC<br>CAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATCGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGG<br>ACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTC<br>CCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCAGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTG<br>ATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGG<br>CTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTT<br>GACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAG<br>CCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTT<br>GGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATT<br>GTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCAC<br>AAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCA<br>ACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCA<br>TGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAG<br>AATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACT<br>ACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCA<br>GAAATAATGCCGCATATCTACAACTATCTGATTTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAA<br>ACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAA<br>AACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAA<br>GACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAA<br>TTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTG<br>GGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAA<br>ATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAA<br>CACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCC<br>AGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCA<br>AAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATG<br>AGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATGATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCAT<br>AGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGG<br>GAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCC<br>TAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTGGGATGAGCAATGAATAAC<br>ATTTTAGTATAGCTAAGCAATATTTGCATATTTATGTGTAATGTGTTTAAGCAAGTATTGGAAGATATTTATACAAATAATAACATTACCCAAAATTCAA<br>AAAAAAAAAAAA</font><font color="green"><u>AAAAAACACAGTGAA</u></font>agatgttaaactgatcaatggatgcccactgaatacccagtttttgaaaaatcttgttcctagattggagtta<br>accatttccacctaccacatcaaatcaaatcgttgtcgtgatgctaagctagctgtacagacaaagatgtgagacacattttttctaattgcaaagcacc<br>ctgattaggcaaatatttttgtagaagcttgagtaagaaaattggcattttgggcattcttaaacggaattagtaacttctgaggaaaaagaaagatagt<br>tatgattgtaaaggcattattatacggcaccagtcttgggactctttgatctagctactgtattttctcaactttcttgtaactcatcaaagagaacatt<br>aatattaaagac	Other	<UL><LI>Brouha B, Schustak J, Badge RM, Lutz-Prigge S, Farley AH, Moran JV, Kazazian HHJr. Hot L1s account for the bulk of retrotransposition in the human population. Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5280-5. Epub 2003 Apr 7.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12682288">PMID:12682288</a>.</LI><LI>Boissinot S, Chevret P, Furano AV. L1 (LINE-1) retrotransposon evolution and amplification in recent human history. Mol Biol Evol. 2000 Jun;17(6):915-28.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=10833198">PMID:10833198</a>.</LI></UL>	E:Library screening:TE-specific hybridization; E:Insertion-specific detection:PCR	NA	NA	NA	NA	NA	intergenic	
0	chr4	113035408	113041444	2000128	0	+	AC004704; RIP_L1_chr4_113_01	ATTTGCGGCCGCGGGTGAAAATCAAATGACCTTGGG	GGAGTCACGATTGGTTTAACGC	LINE	L1	L1HS	gcaaaatagtcttttcaacaaacggtgctggatacttacatgcaaaaacactgaatctagacacaggtattattcccttcacaaaaataaacttaaaatg<br>attaatagagctaaatgtaaaatacaagaatataaaactcctagaaaatgaagtgggtgaaaatcaaatgaccttgggtatgatgatgacattttagata<br>taatgccaagggtatgatccatgaaaaaaataattgataagctgaacttcataaaaaaaaaaaaaaacttctgctctgtgaaagacaatgtcaagaagat<br>aagacaaaccaaagactgggagaaaatattttcaaaagacacatctgctaaaggactgttatccaaaatatataaagaactcttaaa<font color="green"><u>ACTCAACAATAAG<br></u></font><font color="red">GGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACAGGTGATTTCTGCATTTCCATCTGAGGTACC<br>GGGTTCATCTCACTAGGGAGTGCCAGACAGTGGCCGCAGGTCAGTGGGTGCGCACACCGTGCACGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGA<br>AGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGATTCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAG<br>ACCGGCTTAAGAAACGGCGCACCACGAGAGTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGA<br>GATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCTGGGAAGCTCGAACTGGGTGG<br>AGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTT<br>AAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAGCGGGCAGACTGCCTCCTCAAGTGGGTCCCTGA<br>CCCCTGACCCCCGAGCAGCCTAACTGGGAGGCATCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTC<br>CTGTCTATTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACA<br>AAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAATGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAA<br>GCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACAATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGT<br>TGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAA<br>CTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCTAGAAGGGA<br>AGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTAATTGGTGTACCTGAAAG<br>TGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAA<br>ATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGG<br>CAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCC<br>AATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGAC<br>AAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGC<br>AAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTC<br>ACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGC<br>TGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCAAATGGAAAACAAAAAAAGGCAG<br>GGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACA<br>AGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTGAGTGACCTACAAAGAGACTTAGACTCCCAC<br>ACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAACGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGC<br>ACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCA<br>CATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATT<br>AAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGT<br>TCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCCACAA<br>GAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAA<br>ATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAA<br>TTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGA<br>AATACAAACTACCATCAGAGAATACTACAAACACCTCTACACAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTTTCCCA<br>AGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGATCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGAC<br>CAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCC<br>TAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGAT<br>GCAAAAATCCTCAATAAAATACTGGCAAACCGAATTCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCT<br>GGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACTTGATTATCTCAATAGATGCAGAAAAAGCCTTTGA<br>CAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCC<br>AATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGG<br>AAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGT<br>TTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAA<br>GCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAAC<br>TTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATG<br>GATAGGAAGAATGAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAA<br>TTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTACGCCAAAAGAACAAAGCTGGAGGCATCACACTAC<br>CTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGA<br>AATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTGAATAAATGGTGCTGGGAAAAC<br>TGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACCTAAAA<br>CCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCATGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGC<br>CAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATT<br>TTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGG<br>CGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAAT<br>CAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACA<br>CTTTTACCATGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAG<br>CCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGACACTATTCACAATAGCAAA<br>GACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAG<br>TTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATTGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAG<br>GTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGCGGAGGGGGGAGGGATAGCATTGGGA<br>GATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTA<br>AAACTTAGAGTATAAAAAAAAAAAAAAAAAAAAAAAT</font><font color="green"><u>ACTCAACAATAAG</u></font>aaagcacacagcctgattttttaaatgtgccaaaggccttaactgatgcc<br>tctccaaagaagatattcagatagcaaataagcatacaaaaagatgctctaccttgtatgtcatttgggaaatgcaagttaaaacaacaatgtgatacca<br>ctgttacgcaattgatgaacctacattgacacatcatgatcacccaaaagtgagcagaaaggtaaacaaagcctctttcttgtgaatgtgaagaaatgag<br>agtaggataaagagtgtaaaagtattaagaaaagaattactaaaacaaatcaagctttccctggatcacttcctatgaagacatatacaattcctctttt<br>taaaagaaaatttacctaaaaccacaatgcatgtata	UCSC	<UL><LI>Brouha B, Schustak J, Badge RM, Lutz-Prigge S, Farley AH, Moran JV, Kazazian HHJr. Hot L1s account for the bulk of retrotransposition in the human population. Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5280-5. Epub 2003 Apr 7.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12682288">PMID:12682288</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	NA	NA	NA	NA	intergenic	
0	chr12	3478587	3484657	2000129	0	-	AC005908; RIP_L1_chr12_003_01	ATTTGCGGCCGCTCGAAGTCCTAAACCCCCAGTACC	ATAGACACATCATCTGGTCTCTGCC	LINE	L1	L1HS	gcaaaacagaattaataagagttgctttgcaatgttgttgagtaaattaaataaggcaatgtttacaaagtgactgacacagcacccaacccataatatg<br>tatgctaaaatggtagctcttgctatagtgattgctactgcacaaggaaaaagccatgataaagaccctgggaagccagtgggtgcagtgtgcagctgag<br>tgagaagcaggaaagagataagggagagagaccactttctcggacttgcaactattctgaggccattcatcagccatttgctatatggcgggcaccgtgt<br>tgagtaacatcatgggttgaattgtgtcatccaaaaacatgtgtcgaagtcctaaacccccagtacctgtgacagtgagctcatt<font color="green"><u>TAAAAATAGGGTCTT<br></u></font><font color="red">GGGGAGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCAACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAG<br>GTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACC<br>TGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTT<br>TTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAG<br>TCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTG<br>GGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCA<br>GACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACACAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTC<br>CCTGACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCACCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAGCAGACCTGCAGCTGA<br>GGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAA<br>CCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGTCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGA<br>ACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAA<br>GAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTC<br>GAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGA<br>AGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCT<br>GAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTC<br>AGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTT<br>AAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTTGGCAGAAACCCTACAAGCCAGAAGAGAGTGG<br>GGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTA<br>TAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCC<br>GCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCA<br>AATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAG<br>TGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAACAGGATGGAGGAAGATCTACCAAGCAAATGGAAAACAAAAAAA<br>GGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATT<br>CAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACT<br>CCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGC<br>TCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATT<br>GACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAAATCA<br>GGATTAAGAATCTCACTCAAAGCCACTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAA<br>GATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCC<br>TACAAGAGAAAGCAGGAAAGATCCAAAATTGACAGCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGC<br>AAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAA<br>CAAAATTGATAGACCACTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCC<br>ACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTC<br>TCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCC<br>AGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGGAAAAGAGGGAATC<br>CTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGACACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACA<br>TTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCA<br>AGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCC<br>TTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCA<br>CAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGT<br>GTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATG<br>ATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAAT<br>CACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAAT<br>CCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGC<br>TCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCA<br>CAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCAC<br>ACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCC<br>TCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGG<br>AAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACC<br>TAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACA<br>AAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGA<br>AAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAA<br>GTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATG<br>CAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAG<br>GAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGA<br>CCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATA<br>GCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATG<br>ATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCTAACACCGCATATTCTCACT<br>CATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGGAGGGGGGAGGGATAGCA<br>TTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGTGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGT<br>ACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAGAAAGGAAAAAAAAAATAAATAAATAAATAAAAA</font><font color="green"><u>TAAAAATAGGGTCTT</u></font>tgcagatgttatca<br>agttaagatgaagtcatattggattagagtggcccctaatccaacaagactgttgtccttataagaagacgtatagacacacacaggaaagaatgccctg<br>tgaagatgaaggcagagaccagatgatgtgtctatagccaaggaaggctgagcatcgttggccaccacgggaaaccagaagaaaggcaaggaacagattc<br>tccatgaagacttcaagaggaaccaaccctgctggcatctggatttcagacttctggcttccagaactgtggaagaagacatctcgttgttttaaagcca<br>cccagtttgtggtactttattacagcagacctaggagggtaatacaggtgatgaaactacaaagataaatt	UCSC	<UL><LI>Brouha B, Schustak J, Badge RM, Lutz-Prigge S, Farley AH, Moran JV, Kazazian HHJr. Hot L1s account for the bulk of retrotransposition in the human population. Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5280-5. Epub 2003 Apr 7.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12682288">PMID:12682288</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	NA	NA	NA	NA	intron:PRMT8:NM:019854:1/10	
0	chr7	30445388	30451439	2000130	0	+	AC006027; L1HS46; RIP_L1_chr7_030_01	ATTTGCGGCCGCAGCAATCCCACTGCTGGATATATAC	GAAACAGACACTGGCTTGCTTCTATG	LINE	L1	L1HS	agagaagggagagaaagtgagagagcttaactgagcttaaatgttaacaagaatcattttctgagaagataatttttattatttttcatagtttccaaat<br>aaaattacctgtgttccttttgtaatccaataaaaattataatgaaacaaaaagctttaaaaagcctcaagaatcaaaaccacaatgagacaggacctca<br>cactcattaggatgggtactgtcaaaaagagaaaatagcaagtgttggcaaggatgtggagaaactagaatgaactgttggtgggaacataaaatggtgc<br>tgctgccgtggaaaacagtatgatgattcttcaaaaaattaaaaattaccatgtgatccagcaatcccactgctggatatataccc<font color="green"><u>AAAAGAATTGGAGG<br></u></font><font color="red">GAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTACCG<br>GGTTCATCTCACTAGGGAGCGCCAGACAGTGGGCGCAGGCCAGTGTGTGCGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAA<br>GCGCAAGGGATCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGA<br>CCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAG<br>ATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATAGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGA<br>GCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTA<br>AGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGAC<br>CCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGAGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCC<br>TGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACTGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAA<br>AGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAG<br>CTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTT<br>GAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAAC<br>TACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAA<br>GTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGT<br>GATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAA<br>TACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGC<br>AGCCAGAGAGAAAGTTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCA<br>ATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACA<br>AGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGGTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCA<br>AAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCGCCAGCTAACATCATAATGACAGGATCAAATTCA<br>CACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCT<br>GTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGG<br>GGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAA<br>GAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACA<br>CATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAATGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCA<br>CCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCAC<br>ATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTA<br>AGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTT<br>CTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAG<br>AGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAA<br>TAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTCGAAAGGATCAACAAAAT<br>TGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAA<br>ATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAA<br>GACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACC<br>AGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCT<br>AACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATG<br>CAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTG<br>GTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGAC<br>AAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCA<br>ATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGA<br>AGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTT<br>TATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAG<br>CATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACT<br>TACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGG<br>GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAAT<br>TGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACC<br>TGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAA<br>ATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACT<br>GGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAAC<br>CATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGAC<br>AAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTT<br>TCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGC<br>GAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATC<br>AAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAGCAGGTGCTGGAGAGGATGCGGAGAAATAGGAACAC<br>TTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGC<br>CATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGTGGCACTATTCACAATAGCAAAG<br>ACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGT<br>TCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGG<br>TGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAG<br>ATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAA<br>AACTTAGAGTATAATAAAAAAAAAAAGAATCTAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AAAAGAATTGAAGG</u></font>cagtccttgaagagacatttgtatgcccatgtgc<br>acagcagcattattcacaacagccaaagcatagaagcaagccagtgtctgttcttggatgaatgagtaaacaaaatgtggcatagccatgcaatggagta<br>ttactcagccttaaaaaagaaggaaatcctggcggggcacggtggctcacgcctataatcctgacactttgggagaccgaggtgggtggatcatttgagg<br>tcaggagtttgagaccagcctggccaacatggtgaaaccccgcctctactaaaaatacaaaaattagctgggattggtggcgggtgcctataatcccagc<br>tactcgtgtggctgaggcgagagaatcgcttgaacccagaaggcagaggttg	UCSC	<UL><LI>Brouha B, Schustak J, Badge RM, Lutz-Prigge S, Farley AH, Moran JV, Kazazian HHJr. Hot L1s account for the bulk of retrotransposition in the human population. Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5280-5. Epub 2003 Apr 7.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12682288">PMID:12682288</a>.</LI><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	55	6382	326	NA	intron:NOD1:NM:006092:9/14	
0	chr2	102549235	102555282	2000131	0	-	AC007278; RIP_L1_chr2_102_01	ATTTGCGGCCGCTGTTAAGGGCATTACCAAGCAGAG	ACCTTGTATCCTGTGGCCTTGC	LINE	L1	L1HS	acatgttaagggcattaccaagcagagataatggtagaccaatattattcatgaacaaagatacatcaatcttcaacaaaaatattagcgataggatcca<br>ggaatatattaaaaactactacatgatgatcaagttgggtttatctcaggaatgaaagggtagttcaacattttaaaattaataaaaaagttaatttgtt<br>tactacattaacaaaataaaaaataaaaatgatttgattactgtattagattctgataaagcatttgatgtaatatacaatccattaatgtaaaaattct<br>taaattagaaatagaagagaacttactctgataacaggtgtctattaatccccctccacagttaacttaatgcttactggttaatt<font color="green"><u>AATGATGAATTTTC<br></u></font><font color="red">GGGGGAGAGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGTGACGCAGAAGACAGGTGATTTCTGCATTTCCATC<br>TGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGCATTGCCTC<br>ACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCG<br>CTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAG<br>CAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAA<br>CTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCT<br>GCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGG<br>GTCCCTGACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGC<br>TGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCAAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATA<br>AAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCCGTTCCTCACCAGCAAC<br>AGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGC<br>AAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGG<br>CTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCG<br>AGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTA<br>CCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGACCAACGTTCAGA<br>TTCAGGAAATACAGAGAACTCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAAT<br>GTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAG<br>TGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACT<br>TTATAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCCCTAAACATGGAAAGGAACAACCGGTACCA<br>GCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGA<br>TCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCAT<br>CAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAA<br>AAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCA<br>ATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACTCAGATTCATAAAGCAAGTCCTGAGTGACCTACAAAGAGACTTAG<br>ACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTC<br>AGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAA<br>ATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAAC<br>TCAGGATTAAGAATCTCACTCAAAGCCACTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAAT<br>AAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAAT<br>GCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAACAGAA<br>GGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGAT<br>CAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGAT<br>CCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACA<br>CTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAG<br>TCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGA<br>ATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGA<br>ACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGAT<br>GCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAA<br>GCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAAC<br>CCACAGCCAATATCATTCTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACAT<br>AGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGAC<br>ATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAA<br>AATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGTGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGG<br>AATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCA<br>TGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGGCTTTCT<br>TCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCAT<br>CACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAG<br>CTCTCAGAAATAATGCCACATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCT<br>GGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAG<br>ACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCA<br>ACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGTGAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGG<br>AGAAAATTTTCGCATCCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAA<br>AAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAA<br>ATGCAGATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAA<br>TAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGGAATACCATT<br>TGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACA<br>ATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAA<br>ATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTC<br>ACTCATAGGTGGGAATTGAACAATGAGATCACTTGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAG<br>CATTGGGAGATATACCTAATGCTAGATGACACGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACAT<br>GTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAATTAAAAAAAAAA</font><font color="green"><u>AATGATGAATTTTC</u></font>cccctctctacatcttttcaacgttgtgttagagatgc<br>tagttagtacaataaagcaggaaaaaagaatacaaactaccaatattggaaagatacaaagttatgtttatttgaagatgatatgattgtacacatagaa<br>aatgttgatagatccacataaaacatactacatttaataagtgaatttagcaaggccacaggatacaaggttaatttgaaatttaattgtaactgcatat<br>accagcaacaaataattgaaaaataaaatcaaaatgcagtaatttaaaagcacatagcatagcctaaaaatattaaaatgctgagtgataaagttagtga<br>aagatgtacacaaaatctacattaaagaatataagacattaattacta	UCSC	<UL><LI>Brouha B, Schustak J, Badge RM, Lutz-Prigge S, Farley AH, Moran JV, Kazazian HHJr. Hot L1s account for the bulk of retrotransposition in the human population. Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5280-5. Epub 2003 Apr 7.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12682288">PMID:12682288</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	NA	NA	NA	NA	intergenic	
0	chr5	79110470	79116517	2000132	0	-	AC008496; RIP_L1_chr5_079_01	ATTTGCGGCCGCAATAAAACCAGTATGGTCCTGGGG	TTAAAATGCCCCCATGCCG	LINE	L1	L1HS	gtcaggagcaggctgatggaggaggctacgcatcctgattctaaagatcatatcaaatacaaactagcaaatagaaaaaaaaagtcaggaagcggcaacc<br>taatctaccaggaattctaaattataaagctacaataataaaaccagtatggtcctggggcataaatagatggatcaatagacagattataaaggtcagg<br>aatagacccaaacatatagtctcttgagtgtataataatggaagtatttcagatcagaagggaaaatgatgggttttcctgatgggacagctagatagcc<br>atactaaaaaaaaaaaaaaagtaggatttcctacttcacacaatctactgagataaattccagatgataaaatacctagtttt<font color="green"><u>TAAAAATGAAATTACTG<br></u></font><font color="red">GGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTACCGGG<br>TTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGCGCGCACCGTGAGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGC<br>GCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACC<br>GGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGAT<br>CAAACTGCAAGGCGGCAGCGAGGCTGGGGGAGGGGCTCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAGC<br>CCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAG<br>TGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCC<br>CTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTG<br>TCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAG<br>ATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAATGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACGGAACAAAGCT<br>GGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGA<br>AAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTA<br>CGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGT<br>TTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGA<br>TGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACATTCAGATTCAGGAAATA<br>CAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAG<br>CCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGGAGAGAGTGGGGGCCAAT<br>ATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAG<br>CAAATGCTGAGAGATTTTGTCATCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAA<br>ATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACA<br>CATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGATCCATCAGTGTGCTGT<br>ATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGG<br>TTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGA<br>GGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTGAGTGACCTACAAAGAGACTTAGACTCCCACACA<br>TTAATAATGGAAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGAATACCCAGGAATTGAACTCAGCTCTGCACC<br>AAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACAT<br>AGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAG<br>AATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCT<br>TTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAG<br>AAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATA<br>ACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTG<br>ATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAAT<br>ACAAACTACCATCAGAGAATCCTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTGGACACATACACTCTCCCAAGA<br>CTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAG<br>ATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAA<br>CTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCA<br>AAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGT<br>TCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAA<br>AATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAAT<br>ATCATACTGAATGGGCAAAAACTGCAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGAAG<br>TTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTA<br>TCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCA<br>TTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTA<br>CAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGT<br>AGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTG<br>GAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTG<br>ACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAAT<br>AATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGG<br>CTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACCTAAAACCA<br>TAAAAACCCTAGAAGAAAACCTAGGCATTACCATTGAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGCCAA<br>AATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTC<br>GCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGA<br>AGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAA<br>AACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTT<br>TTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCA<br>TCCCATTACTGGGTATATACCCAAATGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGAC<br>TTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTC<br>ATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTG<br>GGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGAT<br>ATACCTAATGCTAGATGACACGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAA<br>CTTAGAGTATAATAAAAAAAAAAAATTAAAAAAAAAAATAAAAATAAA</font><font color="green"><u>TAAAAATGAAATTACTG</u></font>tattggctactacaaaaaaacatgagtgaataaac<br>atacacacacacacacacacacacacagaaagagagaggggggcaggcggcatgggggcattttaaaatatgctacccaagttaaaagctattttcaaaa<br>gagattgataaatccaactcaattattataaaaaatatgcacggtaaaaaatttttaaagatttgaaacttatctcttaataggaaagctaacttcctta<br>aaaaaacagagcttctacaaatcaaaaagaaaaaataccacaatccaagagaaaaaaaattgctaggaaatgatcagtttatagaaaaagaagtactgta<br>gtggctctgaaccatatgaaaagatgttcaacctaataaaagaaatgc	UCSC	<UL><LI>Brouha B, Schustak J, Badge RM, Lutz-Prigge S, Farley AH, Moran JV, Kazazian HHJr. Hot L1s account for the bulk of retrotransposition in the human population. Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5280-5. Epub 2003 Apr 7.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12682288">PMID:12682288</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	NA	NA	NA	NA	intron:CMYA5:NM:153610:9/13	
0	chr15	68808908	68814562	2000133	0	+	AC009269; 79799; RIP_L1_chr15_068_01;AC203602	ATTTGCGGCCGCCCACCCAAAAGACACCGTACTTG;NA	CGCAGTATGCAGTTTTTCAGCC;NA	LINE	L1	L1HS	gaaagcagtttggagatttctcaaagaactgaaaatagaactaccattcaacccagcaatcccattactgggtatatactcaaaggaaaataaatcattc<br>cacccaaaagacaccgtacttgtatgttcactgcagcactattcacaatagcaaaaacatggaagcaacttaggtcccatcaagagtggactggaaaaag<br>aaaatgtggtacatatataccatggaatactacttagccataaaaaaagaatgaaaccatgtctttgctgcagcttggatgcaatcagaggccactatcc<br>cacgcaaattaatgcagaaacagaaaaccaaatcccacatgttcctgcttaccagtgggaactaaacactgagtacacatggacat<font color="green"><u>AAAGATGGGAACAA<br></u></font><font color="red">CCCTTCCGCCGCCTGTGAAGGGACCCACCGAGCTCCCAGGGCCTTTCTGCTGCTTCCTCTACCCCTGTATTTTGCTCGGCTCTGTAACTTGACTCAGCTT<br>CAGAGAGTGGTTAAAAATTCTCAACAAGAAAAAGCTGTGGAGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCG<br>ACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTC<br>CTCAAGTGGGTCCCTGACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAG<br>ACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAA<br>AAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTC<br>ACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAA<br>ACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGA<br>AAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGA<br>AATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTG<br>ATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCA<br>ACGTTCAGATTCAGGAAATACAGAGAACACCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAA<br>GGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCC<br>AGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATACAGCCAAACTAAGCTTCATAAGTGAAGGAGAAA<br>TAAAATACTTTATAGACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAA<br>CCGGTACCAGCCACTGCAAAATCATGCCAAAATGTAAAGACCATTGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATA<br>ATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTC<br>AAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGG<br>AAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTA<br>AAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTGAGTGACCTACAAA<br>GAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGA<br>ATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACC<br>TATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCA<br>AACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAA<br>GGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATA<br>GCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAG<br>CTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTT<br>TGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATC<br>ACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCG<br>ACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAAC<br>CAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAA<br>AAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATAT<br>CCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCAT<br>CCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGAT<br>GCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCT<br>ATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCT<br>ATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTT<br>GCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCA<br>ATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAA<br>ATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAG<br>AACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAA<br>TGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGC<br>TGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAAC<br>AGAACAGAGCCCTCAGAAATAATGCCGCGTATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATA<br>AATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTT<br>AAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAA<br>GCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTA<br>CAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAA<br>CCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCC<br>ATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGAT<br>GCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGA<br>AATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCA<br>CTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAG<br>CCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCG<br>CATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGG<br>GAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAA<br>TGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AAAGATGGGAACAA</u></font>aagacactagagggcagacagagggatgggg<br>ggaagggctgaaaaactgcatactgcgtactatgctcaatacctgggtgacaagatcaatcataccacaaacctcggcaacacacaatacacccaagtaa<br>caaacatgcatatgtacccctgaatctaaaagttgaattttttaatgcagattcataaacaaacaccattctaaatctaaatccatctctaaaagtgttg<br>tctaggaatatatctgagaagctaacattcctaaaccccttaaatataggaaactattttaaggagtctgaagaattgatgtttattctctcaattaaaa<br>aaaatatcaccactaaccaaactgggattatactaatagtcctccagcttgcttc	UCSC;UCSC	<UL><LI>Brouha B, Schustak J, Badge RM, Lutz-Prigge S, Farley AH, Moran JV, Kazazian HHJr. Hot L1s account for the bulk of retrotransposition in the human population. Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5280-5. Epub 2003 Apr 7.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12682288">PMID:12682288</a>.</LI><LI>Bennett EA, Coleman LE, Tsui C, Pittard WS, Devine SE. Natural genetic variation caused by transposable elements in humans. Genetics. 2004 Oct;168(2):933-51.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15514065">PMID:15514065</a>.</LI><LI>Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R,Wilson RK, Eichler EE. A human genome structural variation sequencing resource reveals insights intomutational mechanisms. Cell. 2010 Nov 24;143(5):837-47.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=21111241">PMID:21111241</a>.</LI></UL>	C:Reference; E:Insertion-specific detection:PCR;E: fosmid-end sequencing	NA;NA	NA;NA	NA;NA	NA;NA	NA;NA	intron:UACA:NM:018003:1/19;intron:UACA:NM:018003:1/19	
0	chr8	135152112	135158197	2000134	0	-	L1HS166; AC021017; 238091; RIP_L1_chr8_135_01;AC193119	ATTTGCGGCCGCCCAAGGTGCTAGAATTACAGACGTG;NA	CGACTTCCACAGAGAAAACGGAG;NA	LINE	L1	L1HS	agtcaggagcaacaacagagctacactccctaaaactacagatttgtcattgttgtatacgtaatataaattattttatttttgagacaaggtcttgctc<br>tgtggcccaagctggagttcagtggcacaatcacagctcactgcagccttgatctcccaggcttaagtgatcctcccacctcagcctcttgagtaggtgg<br>gactacaggtacacatcaacatatccagctaagtttttaattttttatttagttgtagagatagggtcttgctattttctccaagctgctctcaaactcc<br>tggcctcaagtgatccttccacctcaacctcccaaggtgctagaattacagacgtgcccagcccataatataaattgtgtgttt<font color="green"><u>AAAATGTTGAAGAATG<br></u></font><font color="red">GGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTACC<br>GGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGA<br>AGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAG<br>ACCGGCTTAAGAAACGGCGCACCACGAGACCATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGA<br>GATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGG<br>AGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTT<br>AAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGA<br>CTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTC<br>CTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACA<br>AAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAA<br>GCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACAGGAGGACATTCAAACCAAAGGCAAAGAAGT<br>TGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAA<br>CTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGA<br>AGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAG<br>TGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAA<br>ATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGG<br>CAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGGAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCC<br>AATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGAC<br>AAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGC<br>AAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTC<br>ACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGC<br>TGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAG<br>GGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACA<br>AGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCAC<br>ACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGC<br>ACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCA<br>CATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATT<br>AAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGT<br>TCTTTGAAACCAACGAGAACAAAGACACAACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAA<br>GAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAA<br>ATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAA<br>TTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACTGATCCCACAGA<br>AATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCA<br>AGACTAAACCAGGAAGAAGTTGAATCTCTGAATCGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGAC<br>CAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAAGTATTCCAATCAATAGAAAAAGAGGGAATCCTCCC<br>TAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGAT<br>GCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCT<br>GGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGA<br>CAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCC<br>AATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGG<br>AAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGT<br>TTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAA<br>GCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGCATAAAATACCTAGGAATCCAAC<br>TTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCATG<br>GGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAA<br>TTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCACATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTAC<br>CTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGA<br>AATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAAC<br>TGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAA<br>CCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGA<br>CAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATT<br>TTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGG<br>CGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAAT<br>CAAAACCACTATGAGATATCATCTCACACCATTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACA<br>CTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAG<br>CCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACTTGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAA<br>GACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAG<br>TTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAG<br>GTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGA<br>GATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTA<br>AAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGCTGATTAAAAAAAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AAAATGTTGAAGAA<br>TG</u></font>taaaaaatgagaaccatgagaaaggaataagatactaccaatagcatttcaggcatgttttaaaagaacacatagaacctctagaaaagaaaatgtga<br>tcactgaaattcaaaagtatttgagacaatgtaaaggacagtaaataagacagcttgaggaatcggtgcaaggatttgacaggaagacattgccaagagt<br>tcagaagagagagaagagatgtaaagtaggaagaagtagaagaaaagaagggtagaatggaaaagtttagcctaatttgtttcagaaaaaatggggtact<br>agaggtgatagggggaaatatttttcaaaaggaattcatgataaaattcagaaatcatcagacttaggtagccagcttgatggaaa	UCSC;UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Brouha B, Schustak J, Badge RM, Lutz-Prigge S, Farley AH, Moran JV, Kazazian HHJr. Hot L1s account for the bulk of retrotransposition in the human population. Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5280-5. Epub 2003 Apr 7.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12682288">PMID:12682288</a>.</LI><LI>Bennett EA, Coleman LE, Tsui C, Pittard WS, Devine SE. Natural genetic variation caused by transposable elements in humans. Genetics. 2004 Oct;168(2):933-51.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15514065">PMID:15514065</a>.</LI><LI>Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R,Wilson RK, Eichler EE. A human genome structural variation sequencing resource reveals insights intomutational mechanisms. Cell. 2010 Nov 24;143(5):837-47.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=21111241">PMID:21111241</a>.</LI></UL>	C:Reference; E:Insertion-specific detection:PCR;E: fosmid-end sequencing	NA;NA	60;NA	6204;NA	102;NA	NA;NA	intergenic;intergenic	
0	chr3	100258191	100258192	2000135	0	-	L1HS373; AC022838; RIP_L1_chr3_100_01	ATTTGCGGCCGCTGCAACGGCTAAATACCATGTG	TCAGTGGCAAAACACGAAAGG	LINE	L1	L1HS	attattaatcaggccatctgaacattctagtaatcacctggaaacaacctaaaatcatttctaactataggttaatgtggatttgggacaaaaatttttc<br>ccttaaaacatctctaagattagtgtattccagttctataatgtgaatattggctggcacattgctgacagttagaaagaatgcaacggctaaataccat<br>gtgcaatttctcaaatcacaaatttgaaggatggtttgcgtcatgtcccaacaggacatttttgggaaaataaagtgttgtttcttcataactattgcag<br>ctaataaaattctaagccagctagataattttctttcattggttaaatgcattgtcactaggtattttgtcggaaaatcttgtt<font color="green"><u>AAGAAGAAGGGCTGGG<br></u></font><font color="red">GGAGCCAAGATGGCCAAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTACCGGGT<br>TCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCG<br>CAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCG<br>GCTTAAGAAACGGTGCACCACGAGACTATATCCCACACCTGGCTCGGAGGTTCCTATGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATC<br>AAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAATCTCGAACTGGGTGGAGCC<br>CACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAATCTCTGCAGACTTAAGT<br>GTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACTCC<br>TGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGT<br>CTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGA<br>TGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTG<br>GATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAA<br>AACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTAC<br>GTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTT<br>TAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGAT<br>GTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATAC<br>AGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGC<br>CAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATA<br>TTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGC<br>AAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAA<br>TCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACAC<br>ATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTA<br>TTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGT<br>TGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAG<br>GAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACACAT<br>TAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCA<br>AGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATA<br>GTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGA<br>ATTTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTT<br>TGAAACCAACGAGAACAAAGACACCACATACCAGAAGCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGA<br>AAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAGAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAA<br>CTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGA<br>TAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATA<br>CAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGAC<br>TAAACCAGGAAGAAGTTGAATCTCTGAATCGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGA<br>TGGATTCACAGTCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAAC<br>TCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAA<br>AAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTT<br>CAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAA<br>ATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATA<br>TCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGT<br>TCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTAT<br>CTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCAT<br>TCTTATACACCAACAACAGACAAACAGAGAGCCAAAACATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTAC<br>AAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCATGGGTA<br>GGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGG<br>AAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGA<br>CTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATA<br>ATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGC<br>TAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCAT<br>AAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAA<br>ATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTG<br>CAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAA<br>GGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAA<br>ACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTT<br>TACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCAT<br>CCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACT<br>TGGAACCAACCCAAATGCCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCA<br>TATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGG<br>GAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATA<br>TACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAAC<br>TTAGAGTATAATAAAAAAAAAAAATAATAAAGTATGATACTCTTTCAAAAAAAAAAAAAAAAA</font><font color="green"><u>AAGAAGAAGGGCTGGG</u></font>aaaatgcgtgcgctaggagca<br>tgtgtgggggtgtggtacagagaactctctttccaccagctcatacagttctaaagcacatattttcttattaaactcagatgttatttttctaatttgc<br>ctctggatttttaatgacatttactccaaacgcaacatttaatagctctgtgaaaataataacaaaattgaacagaagggaagtgtttagtacgaaaaag<br>ttggatttaaattcattttcccagttctcttcttccctttcccctttcgtgttttgccactgacaataattccagtgtcaacaatgagaaccttagggat<br>aagtcaaaatataaatgatctacatttatttggttaactgctggaggaaagacaacatcccgt	Other	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Brouha B, Schustak J, Badge RM, Lutz-Prigge S, Farley AH, Moran JV, Kazazian HHJr. Hot L1s account for the bulk of retrotransposition in the human population. Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5280-5. Epub 2003 Apr 7.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12682288">PMID:12682288</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	60	6294	215	NA	intergenic	
0	chr7	62246631	62252673	2000136	0	-	AC069285; RIP_L1_chr7_062_01	ATTTGCGGCCGCGTGAACATTATACCGCTGATTGCC	AGTTCGCTTGAGCAGCAGTTTC	LINE	L1	L1HS	gtctttaatcactcagcttaataagaaagttgaaaataaataatttacattgtcctactatttacattttactaactccatatgtgtagaggtgtaaggg<br>atttttaaaagagcaacaaggttgagacttgtaaacctgaatttagatagaagatgaatcttcaaaagtattgataactttggaaaataatttttaagaa<br>aggcatgacagccagtgattatctagtttcacaatttgttgtcagagtttgtgaaggctttactataaaaactataggatgaacaaggaatccttgatgc<br>tgagattttgtcttttgtcttaataggtgaacattataccgctgattgccaaagcagacacaatttctaaaaatgatttacagactttt<font color="green"><u>AAGAGTAAGAT<br></u></font><font color="red">GGGGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGG<br>TACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGCGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCT<br>GGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACAGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTT<br>TCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGT<br>CTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCAGGAAGCTCGAACTGG<br>GTGGAGCCCACCACAACTCAAGGAGGCCTGCCTGCCTCTCTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAG<br>ACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCC<br>CTGAACCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAG<br>GGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAAC<br>CACAAAGATGGGGAAAAAACAGAACAGAAAACCTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACGGAA<br>CAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAG<br>AAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCG<br>AGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAA<br>GGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTG<br>AAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAATGTTCAGATTCA<br>GGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTA<br>GGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGG<br>GGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTAC<br>AGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCG<br>CTGCAAAATCATGCCAAAATGTAAAGACCATCGAGTCTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAA<br>ATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGT<br>GTGCTGTATTCAGGAAACCCATCTCATGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAG<br>GCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTC<br>AACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTGAGTGACCTACAAAGAGACTTAGACTC<br>CCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCT<br>CTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTG<br>ACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAG<br>GATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAG<br>ATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGATGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAACGCCT<br>ACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTGGCAGAAGGCA<br>AGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAAC<br>AAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCA<br>CAGAAATACAAACTACCATCAGAGAATACTGCAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCT<br>CCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAACAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCA<br>GGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCC<br>TCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACAT<br>TGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAA<br>GGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCT<br>TTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCAC<br>AGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTG<br>TTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACATGATTG<br>TATATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACA<br>AGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCCTCAAAGAGAATAAAATACCTAGGAATCCAA<br>CTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACTGCTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCAT<br>GGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATCTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGA<br>ATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTA<br>CCTGACTTCAAACTATGCTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAG<br>AAATAATGCCACATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAA<br>CTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACGTAAA<br>ACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAG<br>CCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAAT<br>TTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACCACCCCATCAAAAAGTGG<br>GCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAA<br>TCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAAC<br>ACTTTTACACTGTTGGTGGGACTGTAAACCAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCA<br>GCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCAGCACTATTCACAATAGCAA<br>AGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGA<br>GTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATA<br>GGTGGGAATTGAACAACGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGG<br>AGATATACCTAATGCTAGATGACACGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCT<br>AAAACTTAGAGTATAATAAAAAAAAAAAACATTAAAAAAAAAA</font><font color="green"><u>AAGAGTAAGAT</u></font>aatgagtgaattgattagcagtggcctccagatatatcagctccca<br>gcagatgaagaaactgctgctcaagcgaactcctcaattaatgtaagtttcagtaacaatatctgacaaagaggctataaatgagtttttatccagaatc<br>cagtgtgaaaattttttaatttttttattttgaaaaacttcttttgagaattgattctttgtaaacagatttatttagatttaattcatacaccgtgttc<br>ctcaaggatattggcttataattttcttcttggaagtatattttctttcttggatatcagggggatgcttgcctcatagaatgactctgaaggtgttacc<br>tcctttttctattttttcaaagaatttgaggatgttttatatt	UCSC	<UL><LI>Brouha B, Schustak J, Badge RM, Lutz-Prigge S, Farley AH, Moran JV, Kazazian HHJr. Hot L1s account for the bulk of retrotransposition in the human population. Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5280-5. Epub 2003 Apr 7.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12682288">PMID:12682288</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	NA	NA	NA	NA	intergenic	
0	chr7	110134289	110140338	2000137	0	-	AC073326; RIP_L1_chr7_109_01	ATTTGCGGCCGCAAATGGTGCTGGGGTAACTGGC	CAAGAAGTGTCCATGTCTTTTGCC	LINE	L1	L1HS	ttcacagaatcagaaaaatctattttaaaattcgtatggaaacagaaaaagagcccgaatagccaaaacaatcccaagctgtaagaacaaagtcagacgc<br>atcacattacctgacttcaaactagtaatgtaagtccacagtaaccaaaagagcatggtactagtacaaaaacagacatgtagaccaatggaacagaata<br>gagaacccagaaatcaaactgtatacctacagccatctgatctttgacaaacccaacaaaaataagcaatggggaaaggactccctattaaataaatggt<br>gctggggtaactggctagacatatgcaaaagaaagaaactgaacccttacctttcaccatatacaaaatcaactcaagatggatt<font color="green"><u>AAAAATTTAAGTGTA<br></u></font><font color="red">GGTTATCTACAAGAGTCATACGAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGTGACGCAGAAGACGGGTGATTTCTGCATTTC<br>CATCTGAGGTACCGGGTTCATCTCACCAGGGAGTGCCAGACAGTGTGCGCAGGCCAGTGTGTGTGCGCACTGTGCGCGAGCCGAAGCAGGGTGAGGCATT<br>GCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTCCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATA<br>TTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCACTGATTGCTAG<br>CACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCGTTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGC<br>TCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAA<br>CCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCA<br>AGTGGGTCCCTGACCCCTGACCCCCAAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACAGCAGGGTATTCCAACAGACCT<br>GCAGCTGAGGGTCCTGTCTCTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTTCATCACCATCATCAAAGACCAAAAGT<br>AGATAAAACCACAAAGATGGGGAAAAAACGGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCA<br>GCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAAATACTCTGAGCTACGGGAGGACATTCAAACCA<br>AAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGGATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAAC<br>CAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATG<br>AAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTG<br>GTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGT<br>TCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAA<br>AAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAA<br>GAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAA<br>ATACTTTACAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGG<br>TACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGA<br>CAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGA<br>CCCATCAGTGTGTTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAA<br>CAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGG<br>GATCAATTCAACAAGAAGAGCTAACTATCCTAAATATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTGAGTGACCTACAAAGAGA<br>CTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTG<br>AACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAAAATATACATTTTTTTCAGCACCACACCACACCTATT<br>CCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACT<br>AGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCA<br>GAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCAC<br>TAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAG<br>CAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAA<br>AGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCA<br>CCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCCAGAAGAAATGGATACATTCCTCGACAC<br>ATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAA<br>AAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAG<br>AGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTT<br>GATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCT<br>GGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAG<br>AAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGA<br>CAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTC<br>AACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAAGAAGTCAAATTGTCCCTGTTTGCAG<br>ACAACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGT<br>ACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATAC<br>CTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACA<br>TTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGAC<br>TTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGA<br>GGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAA<br>CAGAGCCCTCAGAAATAATGACGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATG<br>GTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAAC<br>GTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAA<br>TGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAAC<br>ATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCC<br>ATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCA<br>GAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGG<br>AGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATA<br>CCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTAT<br>TCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCAT<br>AAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATA<br>TTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGG<br>GATAGCATTGGGAGATATACCTAATGCTAGATGACTCGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATACGTAACTAACCTGCACAATGTG<br>CACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAATTAAAAAA</font><font color="green"><u>AAAAATTTAAGTGTA</u></font>acacctcaaactgtaaaaatcctagaagaaagcca<br>aggaaacatcattctgggtatcaaccttgggaaagaatttatgaccaagtcctcaaaaaaattacagcaaaaacaaaaattgacgagtgggacctaatta<br>aactaaggagcatctgcacagcaaaagaaactatcaatagagtaagcaggcaacctacagaataagagaaaatattcacaacctatgcacctgacaaaga<br>tctaatattcagaatctataaggaacttaaggaaatcaacaagcaaaaacaaccccattaaaaagtgggcaaaagacatggacacttcttgaaagaagac<br>atacaagtagccaacaagcatgaaaaaatgctcagcatcaccagtcatca	UCSC	<UL><LI>Brouha B, Schustak J, Badge RM, Lutz-Prigge S, Farley AH, Moran JV, Kazazian HHJr. Hot L1s account for the bulk of retrotransposition in the human population. Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5280-5. Epub 2003 Apr 7.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12682288">PMID:12682288</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	NA	NA	NA	NA	intron:IMMP2L:NM:032549:5/6	
0	chr1	245917099	245923131	2000138	0	+	AC091612; 237935; RIP_L1_chr1_244_01;AC229898	ATTTGCGGCCGCTTACCAGAAGGTGGGAAGGGAG;NA	TTACACAGTGCAACACATCCGTTC;NA	LINE	L1	L1HS	tggcagtttatctatttctttatatgtactaatatttgcagatctgataatattaatattttaccagaaggtgggaagggaggagaggtgaagagaagtt<br>gcttactgggtacaaaaatacagttagatagaatatattctactgtttgtagcacagtatggtgactgtagttagcaaaaattaattgtatatttcaaaa<br>tagctagaagtgaagatttaaatgtttccaacaagggaaatgatcaatctttgaggtgatggatattctaattaccctgatttgataatcacacattgta<br>tgcatgtatcacagtgccaatatgaaccctataaatatgtacagttacagttatactttgataaagatactgcaaaagtt<font color="green"><u>AAAAAATGAAAAGAAAGATC<br></u></font><font color="red">GAGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTA<br>CCGGGTTCATCTCAATAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCAAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGG<br>GAAGTGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGTACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTC<br>AGACTGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCT<br>GAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGT<br>GGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGAC<br>TTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCT<br>GACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGG<br>TCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCA<br>CAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAATGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACTAGCAACAGAACA<br>AAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAA<br>GTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAG<br>AACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGG<br>GAAGGTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAA<br>AGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGG<br>AAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTGCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAG<br>GGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGG<br>CCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAG<br>ACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAATCACTAAACATGGAAAGGAACAACCGGTACCAGCCGCT<br>GCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAAT<br>TCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGT<br>GCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCAAATGGAAAACAAAAAAAGGC<br>AGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTCAAACCAACGAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAA<br>CAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCC<br>ACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCT<br>GCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGAC<br>CACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGA<br>TTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGAT<br>GTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTAC<br>AAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAG<br>AAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAA<br>AATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACA<br>GAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCC<br>CAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGG<br>ACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTC<br>CCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTG<br>ATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGG<br>CTGGTTCAATATACGCAAGTCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTT<br>GACAAAATTCAACAACTCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAG<br>CCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTT<br>GGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATT<br>GTTTATCTAGAAAACCCCATCATCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCAC<br>AAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACTTAGGAATCCA<br>ACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCA<br>TGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGTTACCAATGACTTTCTTCACAG<br>AATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACT<br>ACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCA<br>GAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAA<br>ACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGACTTAAATGTTAGACCTAA<br>AACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAA<br>ACCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAA<br>TTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTG<br>GGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCAA<br>ATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAA<br>CACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCC<br>AGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCA<br>AAGACTTGGAACCAACCCAAATGTCCAACAATGATAGTCTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATG<br>AGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCAT<br>AGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGG<br>GAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCC<br>TAAAACTGAGAGTATAATAAAAAAAAAAAAAAA</font><font color="green"><u>AAAAAAAGAAAAGAAAGATC</u></font>atattaaaacaatgaggaaaaatcttgatgatattcatttataaaga<br>acggatgtgttgcactgtgtaatagtgttaaaatacagtttaaatgtgcagttataaaaatgttgttactagtgagggaaaaaataaaatgaaataaaac<br>aaaaacttaagcttggaaatagactctagcatacataatgttttggtatttaataatttttgcatttaaaatcagtaaagaagtaaattatctagaaaga<br>aattgtggagtaattaattagtcctttgggacacaataactcagctcaaaaccacattctctaaaccaaaattaattacaaaacaaatatgatttcaaat<br>agtaaaataaataaaactacagaagctatcaga	UCSC;UCSC	<UL><LI>Brouha B, Schustak J, Badge RM, Lutz-Prigge S, Farley AH, Moran JV, Kazazian HHJr. Hot L1s account for the bulk of retrotransposition in the human population. Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5280-5. Epub 2003 Apr 7.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12682288">PMID:12682288</a>.</LI><LI>Bennett EA, Coleman LE, Tsui C, Pittard WS, Devine SE. Natural genetic variation caused by transposable elements in humans. Genetics. 2004 Oct;168(2):933-51.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15514065">PMID:15514065</a>.</LI><LI>Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R,Wilson RK, Eichler EE. A human genome structural variation sequencing resource reveals insights intomutational mechanisms. Cell. 2010 Nov 24;143(5):837-47.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=21111241">PMID:21111241</a>.</LI></UL>	C:Reference; E:Insertion-specific detection:PCR;E: fosmid-end sequencing	NA;NA	NA;NA	NA;NA	NA;NA	NA;NA	intergenic;intergenic	
0	chr1	172825888	172832139	2000139	0	-	AL021069; RIP_L1_chr1_171_01	ATTTGCGGCCGCAAGATGCCCACTTTCACCACCG	CTGAATCTGCACATTGCTTTGGAC	LINE	L1	L1HS	tgcccactttcaccaccgttattcaacatagtcctggaaatcctagctaaaggaatcagataagataaagaaataaaggtcatccaaactgaaatggaag<br>aagtcaaattatccttctttgcagatgatataatcttatatttagaaaaacctaaagacttaatcaagaaattattagaactgagaagtaaattacataa<br>aattacaggatataaaatcaatatatgaaaatcaatagcatttaaatatgccaacaatgaacaatctgaaaaagaaatttaaaatttaagaatccaattt<br>gcaacagctacaaataaattatctaggaataacttaaccaaagaagtgaaagatctgtacaataagaactacaaaacactgatg<font color="green"><u>AAAGAAACTGAAGAGG<br></u></font><font color="red">AGGGAGGAACCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCCACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTA<br>CCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGA<br>AGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAG<br>ACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGA<br>GATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCAAGGCTTGCTTAGGTAAACAAAGCAGCAGGGAAGCTCGAACTGGGTGG<br>AGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTT<br>AAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGA<br>CCCCTGACCCCCGAGCAGCCTAACTGGGAGGCAGCCCCCAGCAGGGGCACACTGACACCTCACATCGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTC<br>CTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACA<br>AAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAA<br>GCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGT<br>TGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAA<br>CTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGA<br>AGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTCAAAG<br>TGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAA<br>ATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGG<br>CAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCC<br>AATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGAC<br>AAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGC<br>AAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTC<br>ACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGC<br>TGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCAAATGGAAAACAAAAAAAGACAG<br>GGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACA<br>AGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTGAGTGACCTACAAAGAGACTTAGACTCCCAC<br>ACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGC<br>ACCAAGCGGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACATCACACCTATTCCAAAATTGACCA<br>CATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATT<br>AAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGT<br>TCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAA<br>GAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAA<br>ATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAA<br>TTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACAGATCCCACAGA<br>AATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCA<br>AGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGAC<br>CAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCATTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCC<br>TAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCCAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGAT<br>GCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCT<br>GGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGA<br>CAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCC<br>AATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGG<br>AAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGT<br>TTATCTAGAAAACCCCATCATCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAA<br>GCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGAGTCAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAAC<br>TTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATG<br>GGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAA<br>TTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTAC<br>CTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAAGAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGA<br>AATAATGCCACATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGATAAC<br>TGGCTAGCCATATGTAGAAAGATGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACCTAAAA<br>CCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGA<br>CAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATT<br>TTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGG<br>CGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATGAGAGAAATGCAAAT<br>CAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCGATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACA<br>CTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAG<br>CCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAA<br>GACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAG<br>TTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAG<br>GTGGGAATTGAACAATGAGATCACTTGGACACAGGAAGGGGAATAGCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGA<br>GATATACCTAATGCTAGATGACACGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTA<br>AAACTTAGAGTATAATAAAAAAAAAATAAATAAAAAAAAAAAGAAAAAAAAACAATACAGCATCTAAAACAAAGGAGGTATTAAAAAATAACTTTACAGT<br>CTCATATTCATTTATTTAACCAAAAGTTGTTAGAGCATTAACTTTGTGTATTAGTCCATTTTAAATTGCTGTAAAGGAACACCTGAGACATGGTAATTTA<br>TAAATAAAAGAAGTTTATTTGGCTCACAAAAAAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AAAGAAACTGAAGAGG</u></font>tcacaaaaaatggaaagatattccatgttcat<br>ggattagaagaatcaatattgttaaaatgtccaaagcaatgtgcagattcagtgtaatccgaatcaaagtatcaatctcattcttcacagaaatataaat<br>aaataatcgtaaattttgatggaacccatgaaagacctggaatagcctaagccatcctaaacaaaaagaacaaaactggagaactcacattacctgactt<br>caaattatactacagagctactgcaaccaaaacagcacgggactggcataaaaagaaacacatagaccaatggaacagaataaagaatccagaagtaaat<br>ccatacatctacattgaactcatttttgacaacatgccaagaacatacattg	UCSC	<UL><LI>Brouha B, Schustak J, Badge RM, Lutz-Prigge S, Farley AH, Moran JV, Kazazian HHJr. Hot L1s account for the bulk of retrotransposition in the human population. Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5280-5. Epub 2003 Apr 7.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12682288">PMID:12682288</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	NA	NA	NA	NA	intron:RABGAP1L:NM:014857:13/21	
0	chrX	82201251	82207300	2000140	0	-	AL022308; RIP_L1_chrX_082_01	ATTTGCGGCCGCTGGGACTTACATCAGCAGCTTCC	ACAGGTGTGTTAGCCAGGGTTGTC	LINE	L1	L1HS	tctgatcatcccaacaatggttaatattacaagtcaacttgactggcttgaggatgcccagatggctggtgaagcactgttcctgggtgtgtctgtgagg<br>gtgttgccagaggagattgacatttgagtcagtggactggaggatcaagattcaacccagtgtgggtggacaccattcaatcggctgccagaatggcaag<br>aacaaagcaggtggaagaaggcatgataattttgcttgctgagtcttgtggctttctctctctcttcccatgctggatacttgattcctctcctcctgcc<br>cttggacatcagactccaggttcttaggcctttggactttgggacttacatcagcagcttcccagggggtcttgggccttcagctt<font color="green"><u>AAGAGTGAGGGCTG<br></u></font><font color="red">AGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTA<br>CCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGG<br>GAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCAGGTCACTCCCACCCGAATATTGCACTTTTC<br>AGACTGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCACTGATTGCTAGCACAGCAGTCT<br>GAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGT<br>GGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGAC<br>TTAAATGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGTCAGACTGCCTCCTCAAGTGGGTCCCT<br>GACACCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACAGCAGGGTATTCCAACAGACCTGCAGCTGAGGG<br>TCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTCTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCA<br>CAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACA<br>AAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAA<br>GTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAG<br>AACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGG<br>GAAGTTTAGAGACAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAA<br>AGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAATGTTCAGATTCAGG<br>AAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAG<br>GGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGG<br>CCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAG<br>ACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCT<br>GCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAAT<br>TCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGT<br>GCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGC<br>AGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAA<br>CAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTGAGTGACCTACAAAGAGACTTAGACTCCC<br>ACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCT<br>GCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCACAAATCAACAGAATATACATTCTTTTCAGCACCACACCACACCTATTCCAAAATTGAC<br>CACATAGTTGGAAGTAAAGCTCTCCTCAACAAATATAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGA<br>TTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTGCATAACGAAATGAAGGCAGAAATAAAGAT<br>GTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTAC<br>AAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGAAAACACATTCAAAAGCTAGCAGAAGGCAAG<br>AAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAA<br>AATTGAAAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACTGATCCCACA<br>GAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATAAATTCCTTGACACATACACTCTCC<br>CAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGG<br>ACCAGATGGATTCACAGCCGAATTCTACCAGAAGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTC<br>CCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTG<br>ATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGTTGCAAGG<br>CTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAATGCCTTT<br>GACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAG<br>CCAATATCATTCTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTT<br>GGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATT<br>GTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCAC<br>AAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCA<br>ACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAATGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCA<br>TGGGTAGGAAGAATCAATATTGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAG<br>AATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACT<br>ACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCTCTCT<br>GAAATAATGCCACATATCTACAACTATCCGATCTTTGACAAACCTGAGAAAAACAAGCAACGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAA<br>ACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACCTAA<br>AACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAA<br>GCCAAAATTGACAAATGGGATCTAATTAAACTCAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAA<br>TTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTG<br>GGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACAATTATACAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAA<br>ATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAA<br>CACTTTTTCACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCC<br>AGCCATCCCATTACTGGGTATATACTCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCA<br>AAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATG<br>AGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATGTTCTCACTCAT<br>AGGTGGGGAATGAACAATGAGATCACTTGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGG<br>GAGATATACCTAATGCTAGATGACACGTTAGTGGGTACAGCACACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCC<br>TAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAA</font><font color="green"><u>AAGAGTGAGGGCTG</u></font>cactgtcagcttgctgattttgaggcttttggactt<br>agaccgattccatgctactggcttttttctttccccagcaggcagacagcctattgtgagatttccccttgtaatcgtgtgagccaattctccctaatta<br>actcccttttatatatacctatatcctactggttttgtccttctggacaaccctggctaacacacctgtgagacccaattagggtatctgatccccagga<br>ctgtaagaaaataaatgtgtgttgttttaagccattaagtttgtggtaatttgttacaacatcagtagaaatctaatacacatagaaacaaaatgtccat<br>ttccaaatattgattttcacattttagtaatgtctatgcacatgaaccaa	UCSC	<UL><LI>Brouha B, Schustak J, Badge RM, Lutz-Prigge S, Farley AH, Moran JV, Kazazian HHJr. Hot L1s account for the bulk of retrotransposition in the human population. Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5280-5. Epub 2003 Apr 7.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12682288">PMID:12682288</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	NA	NA	NA	NA	intergenic	
0	chrX	141393300	141399382	2000141	0	+	AL031586; RIP_L1_chrX_141_01	ATTTGCGGCCGCTCCTCGTCACTCAAAGTGTGGTC	AAAGACAACTGGCAGGACAGGTAG	LINE	L1	L1HS	aaggcaagccagttttagaattttactgaatgtagcagaaaaccccggcaataataatctttgattaaattatcctcatgctcccctactttgggaacct<br>cttttcatgatactgatactgtgattacaaacacacgtacacacatgcataaatgtggtgagtcctaatccagggaagaatgatatgctttcctaaactc<br>tagcattaagagaaaattgggatggattgtgagagtagcagaagagatgacagaacttgaaattatatatgaatggccttgagtagtaaataaaaatgat<br>acacagagccaaggtattttagatcctcgtcactcaaagtgtggtctctgtaccagcagcaccagcatcatctgggagcttgtt<font color="green"><u>AGAAATACAGCATGTC<br></u></font><font color="red">GGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTACC<br>AGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGA<br>AGCGCAAGGGGGCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACTGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAG<br>ACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTGGCACAGCAGGCTGA<br>GATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCAGGAAGCTCGAACTGGGTGG<br>AGCCCACCACAACTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCCGCAGACTT<br>AAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGA<br>CCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTC<br>CTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACA<br>AAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGTGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACGGAAGAAA<br>GCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGAACAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGT<br>TGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAA<br>CTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGA<br>AGTTTAGAGAAAAAAGAAAAAGAAATGGGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGA<br>TGCGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATA<br>CAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAG<br>CCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCAGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAAT<br>ATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAG<br>CAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAA<br>ATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACA<br>CATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAATGTGCTGT<br>ATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGG<br>TTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGA<br>GGAGCTAACTATCCAAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTGAGTGACCTACAAAGAGACTTAGACTCCCACACA<br>TTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACC<br>AAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAACCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAACTGACCACAT<br>AGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAG<br>AATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCT<br>TTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACACATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCCACAAGAG<br>AAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATA<br>ACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTG<br>ATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAGATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGACAT<br>ACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGA<br>CTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAG<br>ATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAA<br>CTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCA<br>AAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGT<br>TCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAA<br>AATTCAACAACCCTTCATGCTAAAAACTCTCAAGAAATTAGGTATTGATGGGACGTATTTCAAAATAAAAAGAGCTATCTATGACAAACCCACAGCCAAT<br>ATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAG<br>TTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTA<br>TCTAGAAAACCCCATCTTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCA<br>TTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATGCAACTTA<br>CAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGT<br>AGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTG<br>GAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTG<br>ACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATAGAGATCAATGGAACAGAACAGAGCCCTCAGAAAT<br>AACGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGG<br>CTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCA<br>TAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAA<br>AATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTC<br>GCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCCAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGA<br>AGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCACCATCACTGGCCATCAGAGAAATGCAAATCAA<br>AACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTT<br>TTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCA<br>TCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGAC<br>TTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTC<br>ATATCGTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTG<br>GGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGAAGAGGGGAGGGATAGCATTGGGAGAT<br>ATACCTAATGCTAGATGACACATTAGTGGGTGCAGCACACCAGCATGGCACATGTATACATATGTAACCTGCACAATGTGCACATGTACCCTAAAACTTA<br>GAGTATAATAAAAAAAATAAATAAATAAAAATAAAATAAAATAAAATAAACTGTCCTAATGCCAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AGAAATACAGCATGTC</u></font>a<br>gtccccatctcagacttactgactcagaatctgcatttttatcaagaacacaaggttattcatacgacacttaagtttgagaaatacttatccagagcat<br>tttgggtatgggatttacctgctttttttcttactgtcatagtcatagcaagtataaacaaaccaagtataagtcaattcaagttgccctacctgtcctg<br>ccagttgtctttactgaatggagagaattttgcactgagggctgacaggactcattacattgtttgtctctgggagctggctgagcttgcaagcgtttgt<br>ggcagattgccatttgaattgtttttcctgtctctttctgttaccaaaaagtataatattgcacaggggggaaaatgtagagg	UCSC	<UL><LI>Brouha B, Schustak J, Badge RM, Lutz-Prigge S, Farley AH, Moran JV, Kazazian HHJr. Hot L1s account for the bulk of retrotransposition in the human population. Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5280-5. Epub 2003 Apr 7.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12682288">PMID:12682288</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	NA	NA	NA	NA	intergenic	
0	chr6	2363014	2369040	2000142	0	-	AL031768; RIP_L1_chr6_002_01	ATTTGCGGCCGCCCCAAAGTGATTACAGGTGTGATCC	AACACAGAAACCCAGTAAAGTGGC	LINE	L1	L1HS	agtggtaaattttgttatgtctattttaccacaatttaaaataagtaaataaaaatcatttacagataaaaggtacattcaaaatataaaatacatcaat<br>gaattttaaagtaacagagtaccaaaagtttttttatattgtttcagaatctatgttgcaattaacttttaaaaattatcatttatttaaatttatgaag<br>actcaaagaatatttataattatccaaaagactatttaaatacttctccttttgcaactacatatttatgtgaagccagattttccttatacgtttcaac<br>caaaacaacattttgcaacagactgaatgcaaagcgtgaatgaaaatccaacttcttctattatgccagacatgacagaggtttgttt<font color="green"><u>AAAAAAAAAAAA<br></u></font><font color="red">TTGTGGAGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTG<br>AGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCA<br>CCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGC<br>TTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGC<br>AGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGTGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAAC<br>TGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTG<br>CAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGG<br>TCCCTGACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCT<br>GAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCAAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAA<br>AACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACA<br>GAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCA<br>AAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGC<br>TCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCAATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGA<br>GAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTAC<br>CTGAAAGTGATGGGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGAT<br>TCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATG<br>TTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGT<br>GGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTT<br>TATAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAG<br>CCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGAT<br>CAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATC<br>AGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAA<br>AAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAA<br>TTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGA<br>CTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCA<br>GCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAA<br>TTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACT<br>CAGGATTAAAAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATA<br>AAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATG<br>CCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAG<br>GCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATC<br>AACAAAATTGATAGACCACTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATC<br>CCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACAC<br>TCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGTTCTGAAATTGGGGCAATAATCAATAGTTTACCAACCAAAAAGAGT<br>CCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAA<br>TCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACAAAAAAAGAGAATTTTAGACCAATATCCTTGATGAA<br>CATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCAAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATG<br>CAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAG<br>CCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACC<br>CACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATA<br>GTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACA<br>TGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAA<br>ATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGA<br>ATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCAT<br>GCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTT<br>CACTGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATC<br>ACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGC<br>CCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTG<br>GGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAAATGGATTAAAGATTTAAACGTCAGA<br>CCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAA<br>CAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACCACATGGGA<br>GAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAA<br>AAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAA<br>TGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAAT<br>AGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTT<br>GACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAA<br>TAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAA<br>TGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCACAAGAACAAAAAACCAAACACCGCATATTCTCA<br>CTCATAGGTGGGAATTGAACAATGAGATCATATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGC<br>ATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATG<br>TACCCTAAAACTTAGAGTATAATAAAA</font><font color="green"><u>AAAAAAAAAAAA</u></font>gtaaaacgatgccactttactgggtttctgtgttgaaaatacagcaatttttcataaaaac<br>atcatttatgtcaacatgtaataggcttatgtttatgtgaattaatgaaagatgtttgcatatgaattaaatattttaaatctgcccagtttgggtttct<br>aatatggtaattgtctataggtacgctccacataatgataaactatttggggtccttgataattttttaaagtgacaaggggcactgagccccaaaactg<br>tgagaactgctgcattcagatggctgtattacagggcatagagcatttaatctcctcctctggctcctctgcccctggaagatggcagttttaatagaga<br>gaatgtagacagtcccattctgggggc	UCSC	<UL><LI>Brouha B, Schustak J, Badge RM, Lutz-Prigge S, Farley AH, Moran JV, Kazazian HHJr. Hot L1s account for the bulk of retrotransposition in the human population. Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5280-5. Epub 2003 Apr 7.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12682288">PMID:12682288</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	NA	NA	NA	NA	intergenic	
0	chr20	7044794	7050846	2000143	0	-	237986; L1HS104; AL096799; RIP_L1_chr20_007_01;AC216061	ATTTGCGGCCGCAGCCACCATGTTCTTTGTGGG;NA	TGCTACAGAGGAGTCCATTTGACTG;NA	LINE	L1	L1HS	tagaccaatgggaatccttcttgccaagccaccatgttctttgtgggaaacaaacatggcttatatttagaaggagaagaggaaggacattcatgacgac<br>acctcacctgatctgagcctcagcctgtgtcagcttggaaatttatgatgattatttcttcctatgggtaaaattaattgatggtgctcatacacaaaga<br>tagtttataagaagtacatcctaaaaccttctgttgttaaatgcaagtacaattttaaaaaaagcaaggatatttcagtattactgttagaaactttctc<br>atggtttctacgctatggagatgtggttttgtttgaactgtgaatgatattacatttttaatattatactagagaattttattcattt<font color="green"><u>AAAAATTTTGTC<br></u></font><font color="red">GAGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTA<br>CCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACTGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACTTGG<br>GAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTC<br>AGACCGGCTTAAAAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTATGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCT<br>GAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGT<br>GGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGGCAGCAGTAACCTCTGCAGAC<br>TTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCT<br>GACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAG<br>AAGGAAAACTAACAACCAGAAAGGACATCCACACCAAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAA<br>AAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAG<br>AATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTG<br>AAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGA<br>ATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAA<br>AAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGGCCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGA<br>ATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAAC<br>GCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAG<br>AAAGGTCGGGTTACCCTCAAAGGGAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACA<br>TTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATCCTTTACAGACAGGCAAATGCT<br>GAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCC<br>AAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAACGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAA<br>TATTAACTTTAAATGTAAATGGACTAAATTCTCCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGA<br>AACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCAAATGGAAAACAAAAAAAGGCAGGGGTTGCAATC<br>CTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAA<br>CTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTGAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAAT<br>GGGAGACTTTAACACCCCACTGTCAATATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAACAGAC<br>CTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAA<br>GTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCAC<br>TCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACC<br>AACGAGAACAAAGACACAACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGG<br>AAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAAT<br>CAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCTAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCG<br>CTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTA<br>CCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCA<br>GGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTC<br>ACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTT<br>ATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCT<br>CAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATA<br>CGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACGTGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAAC<br>AACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGATGTATCTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACT<br>GAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCC<br>AGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAA<br>ACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATA<br>CAACAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGAT<br>GTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAA<br>TCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAAC<br>TACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAA<br>CTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCAC<br>ATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTGAATAAATGGTGCTGGGAAAACTGGCTAGCCAT<br>ATGTAGAAAGCTGAAACTCGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACC<br>CTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACA<br>AATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTA<br>CTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATG<br>AACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTA<br>TGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTGTACACTG<br>TTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTA<br>CTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACC<br>AACCCAACTGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTT<br>TGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGA<br>ACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAA<br>TGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAGCCTGCACAATGTGCACATGTACCCTAAAACTTAGAGT<br>ATAATAAAAAAAAAAAAAAAAAAAAGACTCTAAAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AAAAATTTTGTC</u></font>atgttctactaagttttcacaatcaatcttctcta<br>aactatgtgagctgctggtcttattgaaagtttaaccaggtttgcaacggcctcatctattcctcagcctgctgtgtgaccttggatcttaccattggtt<br>ctctgcttattggcacttccatataagacagggcagaagacacaaaaaagcatggaacccctgtcagtcaaatggactcctctgtagcagttccagagca<br>aaaaaaatgggatgaaaagttgaaacatttgactttcaagaggtttgggcataatatggaaattccatccacaactcctctatttaccattcttggttat<br>aaactaaatttcgtctttttctgagatttaagattccttgtctatgcttggtg	UCSC;UCSC	<UL><LI>Bennett EA, Coleman LE, Tsui C, Pittard WS, Devine SE. Natural genetic variation caused by transposable elements in humans. Genetics. 2004 Oct;168(2):933-51.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15514065">PMID:15514065</a>.</LI><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Brouha B, Schustak J, Badge RM, Lutz-Prigge S, Farley AH, Moran JV, Kazazian HHJr. Hot L1s account for the bulk of retrotransposition in the human population. Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5280-5. Epub 2003 Apr 7.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12682288">PMID:12682288</a>.</LI><LI>Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R,Wilson RK, Eichler EE. A human genome structural variation sequencing resource reveals insights intomutational mechanisms. Cell. 2010 Nov 24;143(5):837-47.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=21111241">PMID:21111241</a>.</LI></UL>	C:Reference; E:Insertion-specific detection:PCR;E: fosmid-end sequencing	NA;NA	59;NA	6196;NA	131;NA	NA;NA	intergenic;intergenic	
0	chr22	27388955	27395311	2000144	0	+	L1HS86; AL121825; RIP_L1_chr22_027_01	ATTTGCGGCCGCGCAACTGTGCAGTATCAGGAAATG	GACAGAGGAAACTGCTGACTCCAC	LINE	L1	L1HS	agtacacacaatataaatgctagtctagctataataatctcaaacacctatacttacagaaggaagagtgcttccacacaaatactctataatttatatg<br>gttcttccaaataagcctaatgaaaattttatttttcataaaatatatttggaatttgtggccaatttcttgaacaattattattaaatggttttcataa<br>atctttgtgaatattaggaagcaatggattcaacaaaagcattatgtgacagtggagcaatattcaaaactcctgttgctacacaagccaaaaatgacag<br>ggatccaagacaactcaaaacaaaaatattacacacagaacagaagcaactgtgcagtatcaggaaatgcaatacactttttctagtgat<font color="green"><u>AAGAAACTTC<br></u></font><font color="red">CACCGGGCGCGGTGGCTCACACCTGTAATCCCAGTACTTTGGGAGGCTGAGGCAGGCTGATCTCGAGGTCAGGAGATCGAGACCATCCTGGCTAACACAG<br>TGAAACCCCGTCTGTACTAAAAATACAATAAATTAGCCAGGCGTGGTGGCGAACGCCTGTAGTCCCAGCTACTCGGAAGGCTGAGATAGGAGAATGGCGT<br>GAACCCAGGAGGCAGAGATTGCAGTGAGCCGAGATAGTGCCGCTGCACTCCAGCCTGGGAGACAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAGAA<br>AGAAAGAAAGAAAAAGAGAGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACACAGAAGACGGGTGATTTCT<br>GCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCG<br>AGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCAC<br>CCGAATATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGA<br>TTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAGCCAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCC<br>GGGAAGCTCCAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACA<br>GCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGC<br>CTCCTCAAGTGGGTCCCTGACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAA<br>CAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGAC<br>CAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTC<br>CTCACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATT<br>CAAACCAAAGGCAAAGAAATTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGC<br>TGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAA<br>TGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGT<br>CTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGG<br>CCAACGTTCAGATTCAGGAAGTACAGAGAACACCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAAT<br>GAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAA<br>GCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAG<br>AAATAAAATACTTTATAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAA<br>CAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATC<br>ACAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGA<br>GTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAA<br>TGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAGCAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATG<br>GTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTAC<br>AAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCA<br>GGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAAAATATACATTTTTTTCAGCACCACACCAC<br>ACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAA<br>TCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAAT<br>GAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTT<br>ATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAA<br>AAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTT<br>TTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGAT<br>ATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCC<br>TCAACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACC<br>AACCAAAAAGAGTCCAGGACCAGATGGATTCACTGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATA<br>GAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAA<br>TATCCTTGATGAACATTGACGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTT<br>CATCCCTGGGATGCAAGGCTGGTTCAATATACACAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATA<br>GATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTA<br>TCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTATCTCACCACT<br>CCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTG<br>TTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAA<br>TCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAAT<br>AAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGG<br>AAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTAC<br>CAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAA<br>AGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGG<br>AACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTA<br>ATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGA<br>TTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCA<br>AAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAAC<br>CTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAA<br>CAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTG<br>GCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAG<br>GATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACT<br>AGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCG<br>GCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATG<br>CAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACA<br>CCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTAGGAGGAGG<br>GGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCA<br>CAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAGAAAGAAA</font><font color="green"><u>AAGAAACTTC</u></font>acatggggccacatgtctaataaaggtgactga<br>atcccaaaattatattggtaacatggaaattcctgataggggaagaatattcccagaagtgtgaccagttagggccaaaataaaaggtacaatttaccca<br>attattatacctaagtacccggccttattaaatatatgttcctcaatatcaaattgtactaaaaatcaggaaactaagctcctagtagagaactggtcaa<br>agggaagatctttgtggagtcagcagtttcctctgtcctacaatttggcaaaataatctcataagcacaagaaggttaatatgcttgcattaaaaatgtt<br>aagttacttataatccaatttaaatgtaagttcaaataccttaacatgttcacatta	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Brouha B, Schustak J, Badge RM, Lutz-Prigge S, Farley AH, Moran JV, Kazazian HHJr. Hot L1s account for the bulk of retrotransposition in the human population. Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5280-5. Epub 2003 Apr 7.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12682288">PMID:12682288</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	60	6154	410	NA	intron:TTC28:NM:001145418:1/23	
0	chrX	95195636	95206247	2000145	0	-	AL137845; RIP_L1_chrX_095_01	ATTTGCGGCCGCTCACTGTAATGCAAGCGTGGTTC	TGCCAAGAGATAGGGGTCTAGTTTC	LINE	L1	L1HS	caaactatttcaaaaaatacagggggaaggaataatttcaaactcattctacaaggccaatattaccctgataccaaaaacacagaaagacacataagaa<br>aaagaaaaaggccaataattctgatgaatattgaggcaaatatcttcaaccaaatactaacaaaccaaattcaacaatacattagaaaggtcattcatta<br>tgaacaagtgagatttatcactgtaatgcaagcgtggttcaaaatactcatatcaatcaatgtggtgtatcatatcaattgaatgaagaataaaaaacgt<br>gattattttaattgatgctggaaatcatttaataaaattcttgcaatcctagtctctgataaaacagactttaaaccaacaaagatcaa<font color="green"><u>AAGAGACAAAG<br></u></font><font color="red">GAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAAAAGAGCTAACTATCCTAAATATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCA<br>AGTCCTGAGTGACCTACAAAGAGACTTAGACTCCCACACAATAATAATGGGAAACTTTAACACCCCACTGTCAACATTAGACAGACCAATGAGACAGAAA<br>GTTAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAATAGAATATACATTTT<br>TTTCAGCACCACACCACACCTATTCCAAAATTGACCACATACTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGACCACAAATTATAACAAACTGTCT<br>CTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGACTCACTAAAAACCGCTAAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTG<br>GGTACATAAGGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACAACATACCAGAATCTCTGGGACACATTCAAAGCAGTG<br>TGTAGAGGGAAATTTATAGCACTAAATGACCACAACAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAG<br>AGCAAACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGGGAGAGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCC<br>AGCGTGAGCGACGCAGAAGACAGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCAATAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTG<br>TGTGCGCACCGTGCGCAAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGA<br>CGGACGTACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCT<br>CGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCAT<br>TGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCT<br>CTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCA<br>CGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGC<br>ACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGA<br>AAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAATGCAG<br>AGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACTAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGAC<br>GATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAA<br>TACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAA<br>GAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAA<br>TATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTAT<br>CCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGA<br>CACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGAC<br>TAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATA<br>TCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAAAAAAATACTTTATAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAG<br>CTCCTGAAGGAATCACTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCA<br>TCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAAT<br>TAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAA<br>ATAAAAGGATGGAGGAAGATCTACCAAGCAAATGGAAAACAACAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTCAAACCAACGAAGA<br>TCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACC<br>CAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGAGAGACTTTAACACCCCACTGTCAACATTAGACAGA<br>TCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAA<br>CAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAAT<br>TATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTG<br>CTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACAACATACCAGAATCTCTGGG<br>ACACATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGACCACAACAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAA<br>AGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACC<br>CTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATC<br>AAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAA<br>ACTAGAAAATCTAGAAGAAATGGGTACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGTCCAATAACAGGC<br>TCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGG<br>TACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAG<br>AGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATC<br>AAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAG<br>CCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTAT<br>TGATGGGACGTATCTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACT<br>GGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTC<br>AATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCATCTCAGCCCAAAATCTCCTTAAGCTGAT<br>AAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGT<br>GAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACTTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGC<br>TCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAAT<br>TTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGC<br>ATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGT<br>ACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAA<br>AAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCT<br>TATACAAAAATCAATTCAAGATGGATTAAAGACTTAAATGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAG<br>GCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAACCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGC<br>AAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAAT<br>GAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCA<br>AAAAACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCAT<br>TAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAG<br>TCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCT<br>ATAAAGACACATGCACACGTATGCTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGTCTGGATTAAGAA<br>AATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTC<br>AGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCA<br>CACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCA<br>TGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTGAGAGTATAATAAAAAAAAAAAAAAGAAAAAAAAAATAAAGAA<br>AAAAAAAAAAAAAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACAAAAAAACCCTTCAAAAAATTAATGAATCCAGGAGCTGGTTTTTT<br>GAAAGGATCAACAAAATTGATAGACCACTAGTAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGATGCAATAAAAAATGATAAAGGGGATATCA<br>CCACCGATTCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTATGCAAATAAACTAGAAAATCTAGAAGAAATGGATAAATTCCTCAA<br>CACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGCTTACCAACC<br>AAAAAGAGTCCAGGACCAGATGGATTCACAGCAGAATTCTACCAGAGGTACAAGGAGAAGCTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAA<br>AAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATCGTGATACCAAAGCCTGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATC<br>CTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATC<br>CTTGGGATGCAAGGCTGGTTCAATATATGCAAATCAATAAATGTAATCCAGCATATAAACAGAACCAAAGACAAAAAACCACATGATTATCTCAATAGAT<br>GCAGAAAAGGCCTTTGACAAAATTCAACAACCCTTCATGCTGAAAACTCTCAATAAATTAGGTATTGATGGGCTGTATCTCAAAATAATAAGAGCTATCT<br>ATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCT<br>ATTCAACATAGTCTTGGAAGTTCTGCCCAGGGCAATTAGGCAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGTA<br>GACGACATGATTGTATATCTAGAAAACCCCATTGTCTCAGCACAAAATCTCCTTAAGCTGACAGGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATG<br>TATAAAAATCAGAAGCATTCTTATACACCAATAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAGTAAAATA<br>CCTAGGAATCCAACTTACAAGGGACGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAATGAAATAAAAGAGAATACAAACAAATGGAAGAAC<br>CTTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTATAGATTCAATGCCATCCCCATCAAGCTACCAATGG<br>CTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCTGCATCACCAAGTCAATACTAAGCCAAAAGAACAAAGCCGG<br>AGGCATCACGCTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGA<br>ACAGAGCCCTCAGAAATAACACCGAATATCTACAACCATCTGATCTTTGACAAACCTGAGAAAAACAAGAAATGGGGAAAGGATTCCCTATTTAATAAAT<br>GGTGCTGGGAAAACTGGCTAGCCATAGGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATTAATTCAAGATGGATTAAAGACTTAAA<br>CGTTCGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCAATATCATTCAGGACATAGGCATGGGCAAGGACTTCATGTCTAAAACACCAAAAGCA<br>AGGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAATGAACAGGCAACCTACAA<br>AATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAAAAAAAACAAACAACCCG<br>ATCAAAAAGTGGGCAAATGACATGAACAGACACTTCTGAAAAGAAGACATTTATGCAGGCAAAAGACACATGAAAAAATGCTCATCATCACTGGCCATCA<br>GAGAAATGCAAATCAAAACCACAATGAGATACCATCTCACACCAGTTAGAATTGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGG<br>AGAAATAGGAACACTTTTACACTGTTGGTGGGACGGTAAACTAGTTCAACCCTTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATA<br>CCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGTGGCACTAT<br>TCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGACAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCAT<br>AAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAATCATCATTCTCAGTAAACTATCTCAAGGACAAAATACCAAACACCACACA<br>TTCTCACTCATAGATGGGAATTGAACAATGAGAACACATGGACACAGGAAGAGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGCGGGGGGAGGG<br>GGGGAGGGATAGCATTAGGAGATATACCTAATGCTAAATGACGAGTTAATGGGTGCAGCACACCAGCATGGCACATGTATACATATGTAACTAACCTGCA<br>CATTGTGCACATGTACCCTAAAATTTAAAGTATAATAATAATAATAAAAAGAAAAATAAATAAATAAAATTCAGTATCCCATTCTGATAAAAACCCTTAA<br>AAAACTGGGTATAGAACGACCATACTTGAAAATAATAAAAGCTGTAGATGAGAGACCTACAGCTAATATTATACTAAATGGAAGAAATATCCCTGGAAAT<br>CCTTCCCTCTAAGATCTGGAACATGACAAGGATGCCCGCTGTCATCACTGTTATTCAACATAGTACTGCAAGTCCCAGCTAAAACAATCAGACAAGAGAA<br>AGAAATAAACTGTGTTCAGATTGGAATGGAAGAAGTCAAATTATCTTTGTTTTCAGATGATATATATAATCTTATGTTTGAAAAAAAACCTAAAGACTCT<br>ACAAAAAAACTGTTAGAACTAAAAAATTCATTAAAGTTGTAGGATACAAAACAAACACGCAAAATCAGTAGCATTTGTATATGCCAATGGTGTGCAATGT<br>GAAAAAGAAATAAAAATTATGATTTACAATAGCCACACATAAAATTAAATACCTAGAAATTAACTTAACCAAAGAAGTGAAAAATCTCTATAATGAAAAC<br>TATAAAACACTGTTGAAAGAAATTGAAGAGGACACCAAATAATGGAAAAACATTTCATGTTCATGGATTGGAAGAATAAATATTGTCAAAATGTCCATAC<br>TATCCAAAGCAATCTGCAGATTCAATACAATCCCTATCAAGATACCAATGCCGTTCTTCACAGAAATAGAAAAAACAGTCCTAAAATTTATACGGAGCCA<br>CAGAATGCCTAG</font><font color="green"><u>AAGAGACAAAG</u></font>ctatcctaagccaaaagggcaaaactggaggaatcacatcacctgacttcaaattatagtgcagagccatagtaagc<br>aaaatagcatggtactggtgtaaaagcagacacatacaccaatggaacagaatagagaacccaaaaacaaattcacacactcatagtaaactcacttttg<br>acaaaagtgccgagaacatacactggggaaaagacaatctcttcaataaatggtgcagggaaaactggatatccatatgcagaagaatgaaactagaccc<br>ctatctcttggcatatacaaaaattaaatcaaactggttaaagacttaaatctcagacctcaaactatgaaactgctacaataaaactttggggaaattt<br>tccaggacattg	UCSC	<UL><LI>Brouha B, Schustak J, Badge RM, Lutz-Prigge S, Farley AH, Moran JV, Kazazian HHJr. Hot L1s account for the bulk of retrotransposition in the human population. Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5280-5. Epub 2003 Apr 7.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12682288">PMID:12682288</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	NA	NA	NA	NA	intergenic	
0	chr1	179102557	179108615	2000146	0	-	AL162431; RIP_L1_chr1_177_01	ATTTGCGGCCGCTTTACATGGGGAAGACGGTGC	CATGATTTAAATTGTGCCATGCTGGTGCGCTGC	LINE	L1	L1HS	cggtgctcaagtaatacttgcaggtactagcacccaggatttaggagtccagtccagttttagctacacaaaagtcttaagtacacaaattgccaataga<br>gcagaactatataattcatagatttgctcattattaatctcaaggaaatcagctctttaaatatatgtatttaatgaatgtgaaatttttgggaagggga<br>actactatgtattaagccataatatttattttacttaaaaaatttttaaacaaagtaatactagtcattgtgagaatgctattctaaaaaaaaaaaaagt<br>cccctggccaccttctctttccatccctagagaccgaacattttcaaaatttgtagctacttcttctacttagcctccatgtat<font color="green"><u>TAAACTAATATGTGTA<br></u></font><font color="red">ATAAGAATAATCCGGGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCAT<br>TTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGC<br>ATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGA<br>ATATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGC<br>TAGCACAGCAGTCTGAGATCAAACGGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGCAAACAAAGCAGCTGGGA<br>AGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAG<br>TAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCC<br>TCAAGTGGGTCCCTGACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACAGCAGGGTATTCCAACAGA<br>CCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAA<br>AGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCA<br>CCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAA<br>CCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAA<br>AACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGTGATCAACTGGAAGAAAGGGTATCAGCGATGGAAGATGAAATGAATGAA<br>ATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGA<br>TTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAA<br>CGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAG<br>GAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCA<br>GAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAAT<br>AAAATACTTTATAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAAC<br>CGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAA<br>TGACAGGATCAAATTCACACATAACAATATTAACTTTAAATGTAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCA<br>AGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGA<br>AAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAA<br>AGGGATCAATTCAACAAGAAGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAG<br>AGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAA<br>TTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAGTATACATTTTTTTCAGCACCACACCACACCT<br>ATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAA<br>ACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTCCATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAG<br>GCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGCGTGTAGAGGGAAATTTATAG<br>CACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGC<br>TAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTT<br>GAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCA<br>CCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGA<br>CACATACTCTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACC<br>AAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAGCTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAA<br>AAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATC<br>CTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCCAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATC<br>CCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATG<br>CAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTA<br>TGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTA<br>TTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTG<br>CAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAA<br>TGTGCAAAAATCACAAGCATTCTTACACACCAACAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAA<br>TACCTAGGAATCCAACTTACAAGGGATGTGAAGGACATCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGA<br>ACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAAT<br>GACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCT<br>GGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACA<br>GAACAGAGCCCTCAGAAATAATGCCACATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAA<br>ATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTA<br>AACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAG<br>TAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTCAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTAC<br>AACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAAC<br>CCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCA<br>TCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAACTCAGGAAACAACAGGTGCTGGAGAGGATG<br>TGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAA<br>ATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGATTATAAATCATGCTGCTCTAAAGACACATGCACACGTATGTTTATTGCGGCAC<br>TATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGC<br>CATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGC<br>ATATTCTCACTCATAGGTGGGAATGGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGG<br>AGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAAT<br>GTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAATTAAAAAAAAAAAA</font><font color="green"><u>TAAACTAATATGTGTA</u></font>tagtgttatatcttgattactcaat<br>tttagatattattcactgactgatgattatgataaatttaatgaggattattatgaggattttaacacattcacatggctcactgttccctctccttcct<br>cgcaatatagtgataatgcaatttttgggtaaatccacattcactttattattaggcttaactgaagaactgcaatttcatgtgcctttcagagtcagtc<br>ttaagctattcaccatgaccaatgtggaaactggtgtcaccaaaaatgtggaagtctttcaggaggaatacacttatctttgaggtcaagagacacagca<br>aagttaagtgtgaatataaagatgacaaaaattgttcctggacctgggatgtggtgctt	UCSC	<UL><LI>Brouha B, Schustak J, Badge RM, Lutz-Prigge S, Farley AH, Moran JV, Kazazian HHJr. Hot L1s account for the bulk of retrotransposition in the human population. Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5280-5. Epub 2003 Apr 7.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12682288">PMID:12682288</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	NA	NA	NA	NA	intron:XPR1:NM:004736:12/15	
0	chr9	97499686	97505715	2000147	0	+	AL354861; RIP_L1_chr9_095_01	ATTTGCGGCCGCAGGCACCTGACCTAATCCTGATCC	CCCACAAAGCTGAAAATCGGTG	LINE	L1	L1HS	tttttactacaagagaagtatgagtacatacgtaggcacatcagtgtgttttgtaccaaataccaatcaatattctttgaggtcttcagtactgtgaaaa<br>aggggatttatattagggctggaaaaggtttgctgggacttaagaaagaattttgtgtcctcccacacattaactcacaaggagctttcagaataccatg<br>tcccaaagggctcatgacacctctgtggactgcactgtatgactggcctctccattcctgagatgagatcattcacacactttctgaccaaatccatgtg<br>ccaggggtacaaaaaggaagacacagtcctgccctcaaggaacttctggtctaacatctgaaacagatacataaatagattgttac<font color="green"><u>AATAACGTTTGGTT<br></u></font><font color="red">GAGGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCATAAGACGGGTGACTTCTGCATTTCCATCTGAGGTACC<br>GGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCTCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGA<br>AGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGATGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAG<br>ACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCGCGCTGATTGCTAGCACAGCAGTCTGA<br>GATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTGGAACTGGGTGG<br>AGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAACCAAAAAGACAGCAGTAACCTCTGCAGACTT<br>AAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCAAGTGGGTCCCTGACCC<br>CTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTG<br>TCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAG<br>ATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAATGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCT<br>GGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGA<br>AAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTGGAGAACTA<br>CGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGT<br>TTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGA<br>TGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATA<br>CAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAG<br>CCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAAT<br>ATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAG<br>CAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTACAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAA<br>ATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACA<br>CATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGT<br>ATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGG<br>TTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGA<br>GGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACACA<br>TTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACC<br>AAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACAT<br>AGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAG<br>AATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCT<br>TTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGATGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAG<br>AAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATA<br>ACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTG<br>ATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAAT<br>ACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGA<br>CTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAG<br>ATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAA<br>CTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCA<br>AAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGT<br>TCAATATACGCAAATCAATAAATGTAATCCAGCATATAAGCAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAA<br>AATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAAT<br>ATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAG<br>TTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTA<br>TCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCA<br>TTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTA<br>CAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGT<br>AGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTG<br>GAAAAAACTACTTTAAAGTTCATGTGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGACAAAAGAACAAAGCTGGAGGCATCACACTACCTG<br>ACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAAT<br>AATGCCGCATATCTACAACTATCTGATATTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGG<br>CTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCA<br>TAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAA<br>AATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTC<br>GCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGA<br>AGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAA<br>AACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTT<br>TTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCA<br>TCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGAC<br>TTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTC<br>ATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTG<br>GGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACGGTGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATAC<br>CTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTA<br>GAGTATAATAAAAAAAAATAAAATAAAAAA</font><font color="green"><u>AATAAAGTTTGGTT</u></font>tgtaggatgacagagatatgcaaagacttgtggatcaccggggacgctcagagaat<br>cacctgcgtggcgagtggagacagcttcagcttgggttctcagctcatagggacactgatttatacactgttcttgtgagtcatcattaagtttgggggg<br>agtcaaaagttattcaccgattttcagctttgtggggagttggcatccctaaccactacattgttcaagggtcatttgtgtatatatatgtgtgtgtctg<br>tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgctgcttttgtcacagaacaagtcatagcatttttttatgttcttagaaacacttcacaaatgtcat<br>ttttgattgctgcgtgaggagcatcctgtg	UCSC	<UL><LI>Brouha B, Schustak J, Badge RM, Lutz-Prigge S, Farley AH, Moran JV, Kazazian HHJr. Hot L1s account for the bulk of retrotransposition in the human population. Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5280-5. Epub 2003 Apr 7.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12682288">PMID:12682288</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	NA	NA	NA	NA	intergenic	
0	chr10	111562115	111568206	2000148	0	-	AL354951; RIP_L1_chr10_111_01;AC207482	ATTTGCGGCCGCGCCTCCATTAGCAGAAAACACTGG;NA	ATGTGGTATTTGTCCTCCCAGAAG;NA	LINE	L1	L1HS	atgcctgagttctagatgatgatgaatgataggattctgtggcaacaataatacatgatgccgctggtgttgctgtgttgaatttgccagctttccctgt<br>acagtcctaacaaactcaatgaagacctgcctcactgtgagggaccaaagagcaagtctccctggttgcctccattagcagaaaacactggttctgctga<br>caaggaaattacttagtcctttaaatcataatgtcatcttcatttctgagacaagaaggccagagctgcatcctcccaaccttcatagccacaaggactt<br>atgacccatttgaaggaacatctcaaggacatctctcaggcattgcttctgacagttgcatgtcactaacaggaaattgccagctc<font color="green"><u>AGAACATGGCTTTA<br></u></font><font color="red">AGGAGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCAACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGG<br>TACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCT<br>GGGAAGTGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTT<br>TCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGT<br>CTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGG<br>GTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAG<br>ACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACACAGCTGGAGATCTGAGAACTGGCAGACTGCCTCCTCAAGTGGGTCC<br>CTGACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCACCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAGCAGACCTGCAGCTGAG<br>GGTTCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAAC<br>CACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGTCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAA<br>CAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAG<br>AAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCG<br>AGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAATCGAGAA<br>GGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTG<br>AAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCA<br>GGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTA<br>AGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGG<br>GGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTAT<br>AGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGTGCTAAACATGGAAAGGAACAACCGGTACCAGCCG<br>CTGCAAAATCATGCCAAAATGTAAAGAACATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAA<br>ATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGT<br>GTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAACAGGATGGAGGAAGATCTACCAAGCAAATGGAAAACAAAAAAAG<br>GCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTC<br>AACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTC<br>CCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCT<br>CTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTG<br>ACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAAATCAG<br>GATTAAGAATCTCACTCAAAGCCACTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAG<br>ATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCT<br>ACAAGAGAAAGCAGGAAAGATCCAAAATTGACAGCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCA<br>AGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAAC<br>AAAATTGATAGACCACTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCA<br>CAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCT<br>CCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCA<br>GGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCC<br>TCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACAT<br>TGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAA<br>GGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCT<br>TTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCAC<br>AGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTG<br>TTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGA<br>TTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATC<br>ACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATC<br>CAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCT<br>CATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCAC<br>AGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACA<br>CTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCT<br>CAGAAATAATGCCACATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGA<br>AAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACCT<br>AAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAA<br>AAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAA<br>AATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAG<br>TGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGC<br>AAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGG<br>AACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGAC<br>CCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAG<br>CAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGA<br>TGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATAATCTCACTC<br>ATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGGAGGGGGGAGGGATAGCAT<br>TGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGTGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTA<br>CCCTAAAACTTAGAGTATAATAAAAAAAAAAAAGAAAGGAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AGAACATG<br>GCTTTA</u></font>tttgtcttctgggaggacaaataccacatgttaaatgggaattaatctgaaggggaaaaagtattgttgcccttgcagctgactctcatttatg<br>ttttgttaaaaaaatcaccgtactgagatttaatttacaatacaataaaatgattcattttaaatgtacagtttaatttttttttttttttgagacaaag<br>tctcactgctctgttgcccaggctggagtgcagtggtatgatctgggctcactgcaacctccacctcctgagttcaagcaattctcgtgttttagcctcc<br>catgtagctgagattacaggtgtgtgccactacacctggctaattttttgtatttttagtagagatgggcttcaccatgttgattaggctgg	UCSC;UCSC	<UL><LI>Brouha B, Schustak J, Badge RM, Lutz-Prigge S, Farley AH, Moran JV, Kazazian HHJr. Hot L1s account for the bulk of retrotransposition in the human population. Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5280-5. Epub 2003 Apr 7.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12682288">PMID:12682288</a>.</LI><LI>Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R,Wilson RK, Eichler EE. A human genome structural variation sequencing resource reveals insights intomutational mechanisms. Cell. 2010 Nov 24;143(5):837-47.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=21111241">PMID:21111241</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR;E: fosmid-end sequencing	NA;NA	NA;NA	NA;NA	NA;NA	NA;NA	intergenic;intergenic	
0	chr6	102198254	102198255	2000149	0	-	AL356438; RIP_L1_chr6_102_01	ATTTGCGGCCGCAATGTGATGGACCCTAACTGAAGC	TATGTCTGCCTTTGTGCCAGTATC	LINE	L1	L1HS	tatagttgtatatgtcatcagtatataaagtttataaagaaaaaataattttcagacaaataaggaagtgagctcaaattaaagaatgtgatggacccta<br>actgaagcagcaaatgtactgctatagaaagaatctatgttagttgattggctactaaatagactaataaattgacaaataaatgttgttttatttataa<br>agtatattttagtataactcaaatttccttggttttaaaaatatgagtacattactcaaagtgatctatagatttaatgtactctctatcaaaattccaa<br>taaaattttttgcagaaacagaaaaactcagctaaaacttcatatagaatctcaagaaatcctgactagccaaaacaatctt<font color="green"><u>AAAAAAGAACAAAGTTGG<br></u></font><font color="red">GGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTAC<br>CGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCAAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGG<br>AAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCA<br>GACCGGCTTAAGAAACGGCGCAACACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTG<br>AGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTG<br>GAGCCCACCACAGCTCAAGGAGGCCTGACTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACT<br>TAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTG<br>ACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGT<br>CCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCAC<br>AAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAA<br>AGCTGGATGGAGAATGATTTTGATGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAG<br>TTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGA<br>ACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGG<br>AAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAA<br>GTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGAGATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGA<br>AATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGG<br>GCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGC<br>CAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGA<br>CAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTG<br>CAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATT<br>CACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTG<br>CTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCA<br>GGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAAC<br>AAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCA<br>CACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTG<br>CACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACC<br>ACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGAT<br>TAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATG<br>TTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACA<br>AGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGA<br>AATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAA<br>ATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAG<br>AAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCAACACATACACTCTCCC<br>AAGACTAAACCAGGAAGAAGTTGAATCTCTGAATCGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGA<br>CCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCC<br>CTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCAGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGA<br>TGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGC<br>TGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTG<br>ACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGC<br>CAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTG<br>GAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTG<br>TTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACA<br>AGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAA<br>CTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCAT<br>GGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGA<br>ATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTA<br>CCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAG<br>AAATAATGCCGCTTATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAA<br>CTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAA<br>ACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAG<br>ACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAAT<br>TTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGG<br>GCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAA<br>TCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAAC<br>ACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCA<br>GCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAA<br>AGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGA<br>GTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATA<br>GGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGAGAGGGATAGCATTGGG<br>AGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCT<br>AAAACTTAGAGTATAATAAAAAAAAAAAAATAATAAAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AAAAAAGAACAAAGTTGG</u></font>agatctcatagttcctgatttcaaac<br>ttattacaaagctagttaaaacagtatgatactggcacaaaggcagacatataaaccaatggaataaaatagagagctcagaaataaactctcacatatg<br>tggtaaaataattttcattttcaacaataaactctaacatatgtggtcaataaatgacaaaagaatagtcttttcaataaacagagatagggaaactgga<br>tatccacatacaaaagaataaagttggactcttactcttcaagatagaaaaaaaattaattcaaaaaacataaaaaacctaaatgtaagatctaaaacta<br>tacaacccttagaaaaaaacataggggaaaatcttcatgacattagatttggcaat	Other	<UL><LI>Brouha B, Schustak J, Badge RM, Lutz-Prigge S, Farley AH, Moran JV, Kazazian HHJr. Hot L1s account for the bulk of retrotransposition in the human population. Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5280-5. Epub 2003 Apr 7.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12682288">PMID:12682288</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	NA	NA	NA	NA	intron:GRIK2:NM:175768:3/17	
0	chr1	185833428	185839516	2000150	0	+	AL357559; RIP_L1_chr1_184_01	ATTTGCGGCCGCAGCTACAAACCTGAGAGCCCTCAC	TTATAGGGTAGGACCCTTTTTGGG	LINE	L1	L1HS	gggtacagccctccattctggctgctttcacaggctggtgttgagtgtttgcagtttttggaaacttacgagatcaaaagaaagctacaaacctgagagc<br>cctcaccctggaagacattcatacaatgtaatggactggactaattattaatgatggtgtatattcttttcatagaaaggatccatgttcaaaaactaga<br>ggttggcctgtggtgttatttgatacacacacacacacaaatatatatttatatgtatatacaacgtaatatatgtgtatatataatatataacatataa<br>aacacatatgccaggaactggcttataactcccagagcccttatcatagtcttttgttacaacattgggtgctttaggcctt<font color="green"><u>AGAAAACAGAATGCTCAG<br></u></font><font color="red">GAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTACCG<br>GGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGCGCGCACCGTGCACGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAA<br>GCGCAAGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGAC<br>CGGCTTAAAAAACGGCGCACCAGGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCACTGATTGCTAGCACAGCAGTCTGAGA<br>TCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAG<br>CCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAA<br>GTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCATGCAGCTGGAGATCTGAGAACAGGCAGACTGCCTCCTCAATTGGGTCCCTGACC<br>CCTGACCCCTGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCT<br>GTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAA<br>GATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCACCTCTCCTCCTCCAAAGGAAAGCAGTTCCTCACCAGCAACGGAACAAAGC<br>TGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTG<br>AAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACT<br>ACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAG<br>TTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTG<br>ATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTACCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAAT<br>ACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCA<br>GCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCAGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAA<br>TATTCAACATTCTTAAAAAAAAGAATTTTCAACCCATAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAA<br>GCAAATGCTGAGAGATTTTGTCAACACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACTGGTACCAGCCGCTGCAA<br>AATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAACGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCAC<br>ACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGGTGGATAAAGAGTCAAGACCCATCAGTGTGCTG<br>TATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGG<br>GTTGCAATTCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAG<br>AGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTGAGTGACCTACAAAGAGACTTAGACTCCCACAC<br>ATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCAC<br>CAAGCGGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACA<br>TAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAA<br>GAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTC<br>TTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCCACAAGA<br>AAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAAT<br>AACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATT<br>GATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACTGATCCCACAGAAA<br>TACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAG<br>ACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCA<br>CATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTA<br>ACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCTGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGC<br>AAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGG<br>TTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACA<br>AAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAA<br>TATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGAA<br>GTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTT<br>ATCTAGAAAACCCCATTGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGC<br>ATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTT<br>ACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGATACAAACAAATGGAAGAACATTCCATGCTCATGGG<br>TAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATT<br>GGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCT<br>GACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAA<br>TAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTG<br>GCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACCTAAAACC<br>ATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGCCA<br>AAATTGACAAATGGGATCTAACTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTT<br>CGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCG<br>AAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCCTCACTGGCCATCAGAGAAATGCAAATCA<br>AAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACT<br>TTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCC<br>ATCCCATTACTGGGTATATACCCAAATGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGA<br>CTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTT<br>CATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACTGCATATTCTCACTCATAGGT<br>GGGAATTGAACAATGAGATCACAGGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCAGTGGGAGA<br>TATACCTAATGATTGATGACACGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAA<br>ACTTAAAGTATAATAAAAAAAAAAAAAATTTAAAAAAAAATAAAAATAAAAAATAAAAAAAAATAAAATAGAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AGAAAACAGAA<br>TGCTCAG</u></font>atcttctcctgccctccttttacccactccaatgcaggactttaatcttcctccacctttctggttgtgagtcatgagacctttcccaaaaag<br>ggtcctaccctataacccgggggaaggaatgctgacctcataaagcttctataaaaacccaagaggtcaggcttcagggagcttcatgcccctttcccca<br>tacctcaccctatgcatcttttcatatgtatcccttgtaatatcccttataataaaccaggaaatgtgaaaaaaggaaatcaactattagcaacaacagc<br>aacacaagcaacaccattcaatggtttaaaggctaggtgggctagggttatatatgcaatacttatatttgggcgtgatgttgatcagc	UCSC	<UL><LI>Brouha B, Schustak J, Badge RM, Lutz-Prigge S, Farley AH, Moran JV, Kazazian HHJr. Hot L1s account for the bulk of retrotransposition in the human population. Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5280-5. Epub 2003 Apr 7.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12682288">PMID:12682288</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	NA	NA	NA	NA	intergenic	
0	chr1	113841366	113847400	2000151	0	+	AL389921; RIP_L1_chr1_113_01	ATTTGCGGCCGCCTGTAAGTCCCAGCTACTTGGAGG	CCTCTGCTTGCTCATTTCCAGTG	LINE	L1	L1HS	catttttttaaagtaattgttatctaggccacattagccttcaagctacattgtctattgactgaggctccttagatctcttataaaatgcattatattg<br>cctgacttgcatattatattatctaggtaaagcaatgtaattaaagcttaactgaggtcatgggtggtggctcacacctgtagtcccagcactttgggag<br>gcaaaggcaggcagatcacttgaggtcaggtgttcaagaccaacctgggcaacgtggggagagcccgtttctacaaaaatacaaaaattagctgggcgtg<br>atggcgcatgcctgtaagtcccagctacttggaggctgaggtgcgtggatcacttgatcccaggaggtggaggttgcagtgagct<font color="green"><u>AAGATCACACCACTG<br></u></font><font color="red">GAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGG<br>AGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGA<br>GTTCCCTTTCCGAGTCAAAGAAAGGGGTGATGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTTAAGAAACGGC<br>GCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGG<br>CAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAG<br>GAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGAGCAGGGCACAGACAAACAAAAAGGCAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACA<br>GCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCCCTGACCCCCGAGCAG<br>CCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAA<br>ACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAG<br>AACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGATT<br>TTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAA<br>TTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGA<br>AGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAA<br>TAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAAC<br>CAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAA<br>AGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTC<br>GGGTTACCCTCAAAGGGAAGCCTATCAGACTAACAGCAGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAA<br>AGAAAAGAATTTTCAACCCAGAATTTCATTTCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAAGAAAATACTTTACAGACAAGCAAATGCTGAGAGAT<br>TTTGTCACCACCAGGCCTACCCTAAAAGAGCTCCTGAAGGAAGCACTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGT<br>AAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAAC<br>TTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCAT<br>CTCATGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCAAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCT<br>CTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCT<br>AAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTGAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGAC<br>TTTAACACCCCACTGTCAATATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAG<br>ACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATCGACCACATAGTTGGAAGTAAAGC<br>TCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGC<br>CGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGA<br>ACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATC<br>CAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCA<br>GAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAA<br>GACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAG<br>AGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAAACAGGAAGAA<br>GTTGAATCTCTGAATGGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCG<br>AATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGC<br>CAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAA<br>ATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAAT<br>CAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTT<br>CATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGG<br>CAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAA<br>TCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCAT<br>TGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAAC<br>AACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGG<br>ACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATAT<br>CGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTA<br>AAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTTACTTCAAACTATACT<br>ACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCACATATCTA<br>CAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGA<br>AAGCTGAAACTGGATCTCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAG<br>AAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGA<br>TCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCT<br>GACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGAC<br>ACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATA<br>TCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGG<br>GACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTA<br>TATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACTCGTATGTTTATTGCGGCACTATTCACAATAGCAAAAACTTGGAACCAACCCAA<br>ATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATATTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGG<br>ACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGA<br>GATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGGTAGCATTGGGAGATATACCTAATGCTAGA<br>TGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATTA<br>AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AAGATCACACCACTG</u></font>cactccagcctgggtgtcaaagcgagaccctgtctcaggaaaaaaaaaaa<br>aaaaaaaaaaaaaggcttaattgattgaaccagattcgagaaaacagtgctaaattataattttctcaatactgtaaatatttttcaatcttcagcttca<br>ttaacttctataatttgaaattatcccaattattacctgacatgtactaaaattccctaaaatggatcttgagtaacattttcacagtacgataattttt<br>ctctctgtatatatttatatagtcacatatatgcacatacattatacaagcattacttttctataactgtaaggtcagaatttgaagttgtgttttcttt<br>atctttttatttccaatacttggcatcaagttgat	UCSC	<UL><LI>Brouha B, Schustak J, Badge RM, Lutz-Prigge S, Farley AH, Moran JV, Kazazian HHJr. Hot L1s account for the bulk of retrotransposition in the human population. Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5280-5. Epub 2003 Apr 7.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12682288">PMID:12682288</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	NA	NA	NA	NA	intron:MAGI3:NM:152900:1/21	
0	chr11	94809030	94815087	2000152	0	+	AP000652; RIP_L1_chr11_094_01	ATTTGCGGCCGCAGCAAACTGCTGCCAGTGTGTC	GGGATTATCTGGTTGCAGGAGTAG	LINE	L1	L1HS	gcacatcctctgtctcaaacttcccaacagttttaggaggatgtttttacaggatcatgttaaaggtgccggaacagaggctacaagatattaagtaact<br>tgtctgcagttattcaacatttggcattggggttgagatttgcacccaggcttggctgacttcacacttgggtttttaacttctccattaaaagaacatg<br>gataaaaatgtaaggaaagaaaaaagaagacaagtaaaagaagaaaggaaacagtgaggggaagcttcaggctaaggctaaacagattgctaagccatgt<br>agtagaacacaggtcagcaaactgctgccagtgtgtcacatccatcctgatgacctgtttttggattgcaaaatggtttttacatttttaaag<font color="green"><u>AATTGTA<br></u></font><font color="red">GGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTAC<br>CGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGG<br>AAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACAGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCA<br>GACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTG<br>AGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTG<br>GAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACT<br>TAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTG<br>ACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGT<br>CCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCAC<br>AAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAA<br>AGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAG<br>TTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAAA<br>ACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGG<br>AAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAA<br>GTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGA<br>AATACAGAGAACACCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGG<br>GCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGGAAGCCCATCAGACTAACAGCAGATCTCTCAGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGC<br>CAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGA<br>CAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTG<br>CAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATT<br>CACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTG<br>CTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCA<br>GGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAAC<br>AAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCA<br>CACATTAATAATGGGAGACTTTAACACCTCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTG<br>CACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACC<br>ACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGAT<br>TAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATG<br>TTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCACTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACA<br>AGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGA<br>AATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAA<br>ATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAG<br>AAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTTGACACATACACTCTCCC<br>AAGACTAAACCAGGAAGAAGTTGAATCTCTGAATCGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGA<br>CCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCC<br>CTAACTCATTTTATGAGGCCAGCATCATACTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGA<br>TGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGC<br>TGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTG<br>ACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGC<br>CAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTG<br>GAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGCTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTG<br>TTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAACTCTCAGGATACAAAATCAATGTACAAAAATCACA<br>AGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAA<br>CTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCAT<br>GGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGA<br>ATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTA<br>CCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAG<br>AAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAGTGGTGCTGGGAAAA<br>CTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAA<br>ACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAG<br>ACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAAT<br>TTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGG<br>GCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAA<br>TCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAAC<br>ACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCA<br>GCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAA<br>AGACTTGGAACCAACCCAAATGCCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGA<br>GTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATA<br>GGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGG<br>AGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGTGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCT<br>AAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTAAAAAAAAA</font><font color="green"><u>AATTATA</u></font>aataaaacaaagaagaatatgtgagaggagctga<br>atgtgccccataaagcctaaaatatttaatctcttgtccttttttcctgcaccaggccagatatgactcctgggcctcactaccctgaggttaactgtag<br>gtgaaaaggaaggggaaggagatcagcctttggtaaaaatttcctactgctaccagcgtttgacatagattatctaagttaattcttaaaataaccctga<br>gacatggtttgcacttgtcttccctattttagccagagggaaaacctgctcaatgattaattcgcttgtctaaattcccagctaggaattggtagagatc<br>agaatgggtctcctgggatcagacttagacttagagctcagacttaagtctcttgggct	UCSC	<UL><LI>Brouha B, Schustak J, Badge RM, Lutz-Prigge S, Farley AH, Moran JV, Kazazian HHJr. Hot L1s account for the bulk of retrotransposition in the human population. Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5280-5. Epub 2003 Apr 7.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12682288">PMID:12682288</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	NA	NA	NA	NA	intergenic	
0	chr7	110670807	110676838	2000153	0	-	AC004142; RIP_L1_chr7_110_01	ATTTGCGGCCGCCGGGAATGTTGAAAGAGGTCATC	GGCATGTTGACAGGAATGTACACAG	LINE	L1	L1HS	ctgtttgaatatcctttatttctttctcttgcctgattgccctggccagaacttccaatactgtgttgaacgggaatgttgaaagaggtcatccttgtct<br>tgttttcaaaggaaatgcttctaacttttgcccattcagtatcatattggctgtggatttatcatatatggctctggttattttgaggtatgctctttca<br>atacctagtttattgagagtttttaacatgaagggatgttgaattttaccaaaggccttttctgggtctgttgagataatcatgtgttttttgcctttag<br>ttctgtttatgtgatgaattacaaatatgactttctcttctaaatggatagttttctttccttataagcagtttgtaaatatttagt<font color="green"><u>TAAAGCAACAAGA<br></u></font><font color="red">GGGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTA<br>CCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGG<br>GAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGATGGATGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTC<br>AGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCT<br>GAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCACCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGT<br>GGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGAC<br>TTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCT<br>GACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACATCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGG<br>TCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCA<br>CAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACA<br>AAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAA<br>GTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAG<br>AACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGG<br>GAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAA<br>AGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGG<br>AAATACAGAGAACACCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAG<br>GGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGG<br>CCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAG<br>ACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCT<br>GCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAAT<br>TCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGT<br>GCTGTATTCAGGAAATCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGC<br>AGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAA<br>CAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTGAGTGACCTACAAAGAGACTTAGACTCCC<br>ACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCT<br>GCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGAC<br>CACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGA<br>TTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGAT<br>GTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTAC<br>AAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAG<br>AAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAA<br>AATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACA<br>GAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCC<br>CAAGACTAAACCGGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGG<br>ACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACATGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTC<br>CCTATCTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACAAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTG<br>ATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGG<br>CTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTT<br>GACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAG<br>CCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTT<br>GGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATT<br>GTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCAC<br>AAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCA<br>ACTTACAAGGGATGTGAAGCACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCA<br>TGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAG<br>AATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACT<br>ACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCA<br>GAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAACGGTGCTGGGAAA<br>ACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCTTTCCTTACACCTTACACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAA<br>AACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAA<br>GCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAA<br>TTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTG<br>GGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAA<br>ATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAA<br>CACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCC<br>AGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCA<br>AAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATG<br>AGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCAT<br>AGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGG<br>GAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCC<br>TAAAACTTAGAGTATAATAAAAAAAAAAAAAA</font><font color="green"><u>TAAAGCAACAAGA</u></font>aatatagagttgaacactttacttctataagcatataacttttaaaattatatat<br>gtaaaacatgaaggactggaaaacctattgtggaaattactagtccatgcaagaatataaaatttcaacagcttgggaatttactagtactgtgtacatt<br>cctgtcaacatgcctcagttatgtcatagtttttaattctacaagagttttagatagagaattagtatttattgagaactcttttagcataataaatatt<br>ttataattcaatatataataaatacttcacattcagaatatgtatcttgggaatgattgaatggctggtgagcaaggcaacgtcatgccatacatttaaa<br>aattcctgttgtttcttctcaaaacaactact	UCSC	<UL><LI>Brouha B, Schustak J, Badge RM, Lutz-Prigge S, Farley AH, Moran JV, Kazazian HHJr. Hot L1s account for the bulk of retrotransposition in the human population. Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5280-5. Epub 2003 Apr 7.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12682288">PMID:12682288</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	NA	NA	NA	NA	intron:IMMP2L:NM:032549:3/6	
0	chr17	65869026	65869027	2000154	0	+	AC011990; L1HS74; RIP_L1_chr17_065_02	ATTTGCGGCCGCTGCCCACATTAGAACAGGATGC	CTTTAAGAAAAGTGAGGAGCGGTG	LINE	L1	NA	ggaaagatgattgggttaggaaagttgagcagttatttagaaatgagcacacgagctggggagacctctccagagaaggcagtggagaatcaaagaatag<br>agggttgtacaggagatgctttttgggaatggctgtttcaggtatcaattaaagtggaaaggtagggttgtttttgtaaaaaagatccaagacaatggag<br>gatttgcccacattagaacaggatgcaaactacaggacggcagaatgttacagaaacgaaaaatgtgtttcagagtgattggagttagcattctggacgt<br>atttcttacagagttgactagcactattcattttccaccctccaacagttgctgaatgattttgttttaagaaaaaataaacaaaaagtacttagcctca<br><font color="green"><u>nnnnn</u></font><font color="red">NNNNNNNNNN</font><font color="green"><u>nnnnn</u></font>aggaaaataacttagggattttctgcatcttgaaatgcatgcttgtttggaacaaacagccgataaaccaattctcttaa<br>ttatacacaaactgcctcacaattatgtactaaccgaatcctgagtggacttggtagacacttgctgcttatgaaagaaacactacgcagaggcaccgct<br>cctcacttttcttaaagaaaaaaaatgcatgactttaaaaaaagagtttgaaaattctcagtgatcttgttccctcatttatttttccacaagctgtgtc<br>taaattcaggcaaagttatcaacttaccatttaatgatatggtcacttaaacaaagcataaccttaacagaccttcaattcaagcttgcattacacatag<br>tttccaaaagctgttttttt	Other	<UL><LI>Brouha B, Schustak J, Badge RM, Lutz-Prigge S, Farley AH, Moran JV, Kazazian HHJr. Hot L1s account for the bulk of retrotransposition in the human population. Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5280-5. Epub 2003 Apr 7.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12682288">PMID:12682288</a>.</LI><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	detail insertion position unknown TSD unavailable	NA	NA	NA	NA	intergenic	
0	chr10	13299275	13300746	2000155	0	+	L1HS493; 1; RIP_L1_chr10_013_01	GACTACCTTTCTGCGTATTCCTTTC	GTCTAACAGGTACACGAGACTCCAT	LINE	L1	L1Hs	taggtaaaccaactggtattaaacaaagcatggcatccaaccaggaggacagttttgtgtgaatacagcgcaaccttcctggtgtcgctggctgaacagc<br>cttcagggctgacgcaggatctgagctagcagcaggctgagcttgcactcctgcccaaaaacatatcactggtcaaaaataaattctaaagttttttaaa<br>aaaaataaaaatggtcagcacagtgttcctggcggaaaaataaataaataataaatagaaaaaagtttatatacttagatgtatacagatcactcaaagg<br>aaactcaagacaatggtgataatggtttctttcaggagacccaggagggactacctttctgcgtattcctttctgttcttt<font color="green"><u>AAAAATGTTAAACCATGGG<br></u></font><font color="red">GTGCTCGCTTCGGCAGCACATATACTAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCAAATTCGTGAAGCGTTCCA<br>TATTTTTATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAA<br>AACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACCTA<br>AAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAA<br>AGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAA<br>ATTTTCACAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGT<br>GGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCA<br>AATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGA<br>ACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACC<br>CAGCCATCCCATTACTGGGTATATACCCAAATGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCATTATTCACAATAGC<br>AAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGAT<br>GAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCA<br>TAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTG<br>GGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACC<br>CTAAAACTTAAAGTATAATAATAATAATAAAAAAAGAAAAAAAAAAAAAAAAGAAAAGATAAAAAAAAAAAA</font><font color="green"><u>AAAAATGTTAAACCATGGG</u></font>tgtgtatta<br>cctgttagactattttttttttgagatggagtctcgtgtacctgttagactatttttaattttaaaaagccaagataatgtggaaagtgaataaaacatt<br>tttaaacatttataattttaaacattataagatcacagagtatatcagagttctcaattgtagactagaacatttatatttaaccaatttgttttcagag<br>aaatcccttcaaggctagagacaacttttttttagagacagggtcttactctcttgcccagtctggagtgcagtggtgtcacatagttcactataccctc<br>aacctcctgggctcaagcaatcctcccacctcagtctcccgagtagctggaactacaggcatgtgtcaccat	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Buzdin A, Ustyugova S, Gogvadze E, Lebedev Y, Hunsmann G, Sverdlov E. Genome-wide targeted search for human specific and polymorphic L1 integrations. Hum Genet. 2003 May;112(5-6):527-33. Epub 2003 Feb 25.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12601470">PMID:12601470</a>.</LI></UL>	E:Library screening:TGDA; E:Insertion-specific detection:PCR	NA	61	1603	111	NA	intergenic	
0	chr4	88489228	88493322	2000156	0	-	22; RIP_L1_chr4_088_01	NA	NA	LINE	L1	L1Hs	ggaagggcctaaagattggtcctgacatatgaacctctttgaggctaagctggtactaaagtagaccccaaagatgaagttggttttaatatagaaactt<br>attacttctaattagaagagagaacatgttcctcgttaaatacctgtttacatttcagacaccaaataaaatgtcattttcttaaacctcacaacaatac<br>ttttggggagatgttattagtccctcttcagtagatgagagagatctgaggtttagagaaattaaattacaagttatataccctttggcccagtaatccc<br>cctttatgaatctacctgagggagataattatccaaaagtgaaaatatgtgtgcccgaggatgcttattgctgatttgctgtt<font color="green"><u>AAAAATCCAGAATACTA<br></u></font><font color="red">GAGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTA<br>CCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGG<br>GAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTC<br>AGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCT<br>GAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGT<br>GGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGAC<br>TTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCT<br>GACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGG<br>TCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCA<br>CAAAGATGGGGGAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACA<br>AAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAA<br>GTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAG<br>AACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGG<br>GAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAA<br>AGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGG<br>AAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAG<br>GGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGG<br>CCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAG<br>ACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCT<br>GCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAAT<br>TCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAATTTGGATAAAGAGTCAAGACCCATCAGTGT<br>GCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGC<br>AGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAA<br>CAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCC<br>ACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCT<br>GCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGAC<br>CACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGA<br>TTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGAT<br>GTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTAC<br>AAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAG<br>AAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAA<br>AATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACA<br>GAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCC<br>CAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATCGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGG<br>ACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTC<br>CCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTG<br>ATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGG<br>CTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTT<br>GACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAG<br>CCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTT<br>GGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACA</font><font color="green"><u>AAAAA<br>TCCAGAATACTA</u></font>aaaacaaccctaaaatcatcactaggagatgctattgctcccaataatcaatacaatttactgtttactataaaggtataatacagca<br>taatctgggtttattggaattaaatgtaaatcaggtgttccaattatttttttaagctcagttatttttgttaaacttgaatttcaacaaatagttttta<br>aaattttttaaaaatatacatatatatattttttcttttagagacaaggtcttgctttgttccccaggctgatcttgcctcagtgtcccaagtagctggg<br>ctataggcgtgagctgccacacccagcttagcacacttttaatctttgccagtatgataggaaaaaaacagtacttccatgttatattaatatga	UCSC	<UL><LI>Buzdin A, Ustyugova S, Gogvadze E, Lebedev Y, Hunsmann G, Sverdlov E. Genome-wide targeted search for human specific and polymorphic L1 integrations. Hum Genet. 2003 May;112(5-6):527-33. Epub 2003 Feb 25.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12601470">PMID:12601470</a>.</LI></UL>	E:Library screening:TGDA	NA	NA	NA	NA	NA	intron:HSD17B11:NM:016245:5/7	
0	chr9	46019227	46019794	2000157	0	-	25; RIP_L1_chr9_044_01	NA	NA	LINE	L1	L1PA2	gtatctgcctctgcttctatcactggtgatctggggaccatatgcttttcggataagagatgagcctcttagaggtcaatttgtcaattcctctgtctcc<br>tcttggggtggcccctttgtaaattctaatagctataggaaatgaaaagggtgagagtctctgaaattctgggatctcaagagaagctaattctaagtga<br>aaacctcccggactgaagcagtgcctgtggtgaggggatgtccaaggttgagaagcagctctcagctgagtatccctcccctctcttgctctggcagaag<br>tgtcagccctccccttatctcttgtatcatttcctagggcctgcatctcaacctctggctacacattagcaacctggggagtttt<font color="green"><u>AAAAATCCAGATGCC<br></u></font><font color="red">ATGGTGTATATGTGCTACATTTTCTTAATCCAGTCTATCATTATTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAATGCCGCAATAAACA<br>TTCGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATC<br>CCTCATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCGTGTCCTTTGTAGGGACATGGATGAAATTGGAAATCATCATTCTCAGTAAA<br>CTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAACTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCT<br>GGGGACTGTGGTGGGGTGGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACAAGTTAGTGGGTGCAGCGCACCAGCATGGCAC<br>ATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAAAGTATAATAAAAAA</font><font color="green"><u>AAAAATCCAGATGCC</u></font>caggccctactacaggc<br>caaccaaattggaatctctggaggtgggacccaggcatcagtattttaaaaaacttgtggctgggcatggtggctcacacctgtaatcccagcacgttgg<br>gaggccgaggcgggcggattacctgaggtgaggagtttgacacaagcctggcaaacatggtgaaaccccgtctctattaaaaatacaaaaattagctggg<br>catggtggcaagcacctgtaatcccagctactcgggaggctgaggcagggataattgcttgaacccaggaggcagaggttgtagtgagccgagatgtgcc<br>accgcactctatcctgggtgacaagagcaagacaccatctcaaaaacaaaaatgagcaaacaaaaaaa	UCSC	<UL><LI>Buzdin A, Ustyugova S, Gogvadze E, Lebedev Y, Hunsmann G, Sverdlov E. Genome-wide targeted search for human specific and polymorphic L1 integrations. Hum Genet. 2003 May;112(5-6):527-33. Epub 2003 Feb 25.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12601470">PMID:12601470</a>.</LI></UL>	E:Library screening:TGDA	NA	NA	NA	NA	NA	intergenic	
0	chr3	106956551	106956812	2000158	0	-	L1HS6; RIP_L1_chr3_106_01	TTTATTTCCCTGCATCTGATTA	CCTGTTATTAGATAATGAGTTCTAGTC	LINE	L1	L1HS	tcattcacaccagtagtatacagaagttcctgtttgcaaacaccctggcttctgttgatgttcaccctttgttgtatgaaatgtttttcattttttccta<br>tcagttgaaactaaaaccctgtagccttttatgaactagtggtttcatgaaaatattttacctttttttttttaaaagaaatcattctcctcacactttc<br>tattttccattcttcttaccttttcttaaaattgcaggattttcaaattagaatatctaatacacttctccacatttacacaggagaaaacaagcctgga<br>agattaagtgatttgtcaactactgaccagctgacacctttccagatttatttccctgcatctgattaatcccattgtcttt<font color="green"><u>GAAAAGATACTGTTTTTC<br></u></font><font color="red">CACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCAGGGGA<br>GGGGGGAGAGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTG<br>CACAATGTGCACATACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>GAAAAGATACTGTTTTTC</u></font>aagactttaaagaggattac<br>tattgttttttggtagacagactagaactcattatctaataacaggattataacatagtcttatttatcatgttcttatctctcatgatattatatgaac<br>agaactatcactttaacaaaaagtcattaatagatttctgtgtaatagataggtggtagtaagccatcaataaatggcagttcttactcttatttgaaat<br>aaaaagatcctgaaattatattattattacaggtgcatggctatccattggtcatgtattctattctttgtagattgacagttacttatacttgttcact<br>gtattttaaaagcgattcagcctgcaacttaagtggtttataattgtaagggtcaatagaat	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	54	402	122	NA	intron:CBLB:NM:170662:4/19	
0	chr7	69466265	69466402	2000159	0	+	L1HS7; RIP_L1_chr7_069_01	CCTTAGACATATTCTTGGAAATAG	CCAGAATATTTGGGTATTTCATCTG	LINE	L1	L1HS	aagataaattatctcaataactctggaatgacatcaaccccacttagaattaaaggaacagaagtctttgtgataaatattctctcagtctttccctctc<br>tgtgtgtgtataatatttttgttaatacacagatggtaatctaatgagatgcatttattcctcctgatatttgtaagtacagtgtatcttttcattgtat<br>taactgttgttctacatctgtttggatccattctgtggattcaaaatcatgtagatcaccagtctctaatggttggacatttaggatttatctggtttct<br>catctgagtgtttattagatgactattggatttccttagacatattcttggaaatagaattgctatatcaaaaattatgg<font color="green"><u>AAAATCTGAAGCTATTGATA<br></u></font><font color="red">TACCTAATGCTAGATGACACATTGGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAAC<br>TTAGAGTATAATATAAAAAAAAGAAAAAAAAAAAAAA</font><font color="green"><u>AAAATCTGAAGCTATTGATA</u></font>gtcttatttttaattgctctaaaataagtattaatttcttaga<br>aagaattatttatttaaattaagatatttatgcagatgaaatacccaaatattctggtttgctgtttatttttatcccataactcaacgggtatttatat<br>aattaattatacttttcaagtttttcacccctatgttctacatatattgctacccatgtactccatactctattcttttatgcttctttgaattctgtaa<br>tttaaaaaatcaaagcaaactaaaaacaaaacaattcagctcaaataacattttttcctaaaaacctaagtctcccagcttctttgaactcctccttcta<br>tggactcttacagtcctcctctagcctatttatctca	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	58	326	169	NA	intron:AUTS2:NM:001127231:4/18	
0	chr4	15452268	15458340	2000160	0	+	L1HS18; RIP_L1_chr4_015_01	TTGAACAGCTTAGACTCGTCAGATA	GCAGTTAGACAGGAAAACAGAAAGA	LINE	L1	L1HS	ttcaaaactgagacccctcactcatttttaagcagttgtgaccaatggtgtaggtaggtactcattggtagaagcatctttggagatttttccacgtata<br>atagcttggaacaagattgatgcagagaggaaaagctgttcaaaggaggtagaagctgagatgctagaatattgttcctgtttccatgtcactaccttct<br>ctcactaaccacatcagaaaagcagaaggatagattctggagactctactgatggcttttgtttcccaaatgacctgaattccccatgagtcaccttgct<br>tctatctggaaacagccagaaaaggccatgagcattctacagcagttagacaggaaaacagaaagaatgaatgaaggagcaactgt<font color="green"><u>AAAAGCAATCTTGC<br></u></font><font color="red">GGCGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGT<br>ACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCACACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTG<br>GGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTT<br>CAGACCGGCTTAAGAAACGGCGCACCGCGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTC<br>TGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGATTAGGTAAACAAAGCAGCCAGGAAGCTCGAACTGGG<br>TGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGA<br>CTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCTTCAAGTGGGTCCC<br>TGACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACATGGCAGAGTATTCCAACAGACCTGCAGCTGAGG<br>GTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACC<br>ACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAAC<br>AAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGA<br>AGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGA<br>GAACTACATGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAG<br>GGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGA<br>AAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAG<br>GAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAA<br>GGGCAGCCAGAGAGAAAGGTCAGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGG<br>GCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAAAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATA<br>GACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGAGCTAAACATGGAAAGGAACAACCGGTACCAGCCGC<br>TGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAA<br>TTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTG<br>TGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGG<br>CAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCA<br>ACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCC<br>CACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTC<br>TGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGA<br>CCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGG<br>ATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGA<br>TGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTA<br>CAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAA<br>GAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACA<br>AAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGATGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCAC<br>AGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTC<br>CCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAG<br>GACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCT<br>CCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATT<br>GATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAG<br>GCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTT<br>TGACAAAATTCAACAACGCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACA<br>GCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGT<br>TGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGAT<br>TGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCA<br>CAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCC<br>AACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACTGCTCATGGGT<br>AGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTG<br>GAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTG<br>ACTTCAAACTATACTACAAGGCTCCAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAAT<br>AATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGG<br>CTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCA<br>TAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAA<br>AATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTC<br>GCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGA<br>AGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAA<br>AACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTT<br>TTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCA<br>TCCCATTACTGGGTATATAACCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGAC<br>TTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTC<br>ATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTG<br>GGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGAT<br>ATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAA<br>CTTAGAGTATAATAAAAAAAATAAAAAATAAAAAACAACTCTCAGAAGCAAAAAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AAAAGCAATCTTGC</u></font>agatatctgacga<br>gtctaagctgttcaaagatatgttgcatggagaaaatagaatagtagaaacctagacaaagactgggaaataaagatggtcttatccccaatactctttt<br>accttttttgtcttatgaaacattaacctttttctcataaatgaccagaagacctttatattataattcgtcaactcccctcatttgtgtctgctttagg<br>ctccaagtgagctcactcattctccatctggaaagaaaatatgggcatggcttccatttggacttgtacagacagtggcccataatgggaaccaggtgac<br>acatcacaagggcaggttctgacacctcttccttccagaagcccaggggtgctggcagctgcttctgaggatc	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	60	6174	87	NA	intron:CD38:NM:001775:7/8	
0	chr4	20769968	20775752	2000161	0	+	L1HS39; RIP_L1_chr4_016_01	AGAACCAATCTTGCCCACAC	TGAGGAGTTTCTGAGTAACCTGGTA	LINE	L1	L1HS	tgggcttattcctgaaagggccacaagtgtgctttggtgttggcctcagacgacttctgcaactgccaaactactaatcacatgtctttccaatcaatga<br>ccacattgtcattaaaagcaagactaccaggcatcactgctattgcatttactttgaaaatacaaggctggctgtggaatgttaaggcaggtagaccatt<br>gggggatgggaagcatttccttagatggggaactgaaggaagggaaggtgttctgaggagaggggaaagcagaaataaaaactagaaaaaggaaaggtac<br>aagatgtaatgaggagtttctgagtaacctggtatattagtttgataggactcccatagcaaagtaccgcaaagtgggtggctt<font color="green"><u>AGAAATTTATTGTCTT<br></u></font><font color="red">GGCCATTTTCCTCCGGAAGTGCGGATCCCAGCGGCGGTCCTGTAGCTGAGCAGGCCTGGGGCTTGGTTCTATGTCCCTGTGGCTATGTTTCCAGTGTCCT<br>CTGGGTGTTTCCAAGAGCGGCAAGAAACGAATAAATCTCTGTTTTAGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGT<br>GAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCA<br>CACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACG<br>CACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTTAAGAAATGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGG<br>GTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCA<br>GGCTTGCTTAGGTAAACAAAGCAGCCCGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGG<br>GCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAACTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGC<br>TGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACTCCTGACCCCTGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTG<br>ACACCTCACACGGCAGGATATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCC<br>ATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAATTGGAAACTCTAAAACGCAGAGCGCC<br>TCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAA<br>ATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAAATTAGAAGAATGTATAACTAGAATAACCAATACAGA<br>GAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGG<br>GTATCAGCAATGGAAGATGAAATGAATGAAATGAAGTGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGG<br>ACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGA<br>GAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATATTCCTCGAGAAGAGCAACTCCAAGACACATA<br>ATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGACGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAG<br>CGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGC<br>CAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTG<br>AAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACT<br>AATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAG<br>ACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGCGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAA<br>GGATGGAGGAAGATCTACCAAGCAAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAA<br>GAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATT<br>CATAAAGCAAGTTCTCAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACG<br>AGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACATAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAAT<br>ATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAAC<br>AAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTG<br>AATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGATGCAT<br>TCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCACAATTGACACCCTAACATCACAATTAAAAGAACT<br>AGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAA<br>AAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAG<br>ACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGA<br>AAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTGAACCAGGAAGAAGTTGAATCTCTGAATCGACCAATAACAGGCTCTGAA<br>ATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCAT<br>TCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTAATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACAC<br>AACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAG<br>CTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAG<br>ACAAAAACCACATGATTATCTCCATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGG<br>GATGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCAGCACA<br>AGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAG<br>GAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAA<br>CTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTC<br>CCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGG<br>AAATAAAAGAGGAGACAAATAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAG<br>ATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCC<br>AAGTCAATCCTAAGCCAAAAGAACAAACCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGT<br>ACAAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAA<br>GCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACA<br>AAAATCAATTCAAGGTGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGG<br>GCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGA<br>AACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTC<br>AAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACAGTTCTCAAAAGAAGACATTTATGCAGCCAAAAAAC<br>ACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAA<br>GTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTG<br>TGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAG<br>ACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTG<br>GCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAA<br>CTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCT<br>GGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCAC<br>ATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAA</font><font color="green"><u>AGAAATTTATTGTCTT</u></font>atagt<br>tgtggaggctagaagttcaagatcaaggtgtgggcaagattggttctttctgagagctatgaagaagaatctcgttgatgcctccccctagcttcttgtg<br>gtttgctggcaattttgggcattcattggcttgcagatgcatcacgtaatttctgccttcatcttcacatggcattctcgctgtctgcatgtctgactcc<br>aaatttcccttttctatgaggacaccagtaatactggattagaggttcactcctctggtatgacctcatcttaattatgtctgcaatgaccctatttcca<br>aataagatcacattctgaggtattggggcttaggaattcagcatatgtattttggggagcacagttcagcatgtgacat	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	60	6337	155	NA	intron:KCNIP4:NM:001035004:1/8	
0	chr3	4055896	4056553	2000162	0	-	L1HS73; L1HS178; RIP_L1_chr3_004_01	ATAAGGAGCCTAGGGAAGAACTTTT	CAAGCATGCCTGAAACATCTAT	LINE	L1	L1HS	acataatttgacctgttgttttatttattttcccaagctttattgaagtataattgacaaattaaaattgtatatatttaaggagtacaaaatgatgttt<br>tgatatatttccagattgtgaaatgtgaccaaaattaagctaatcaacatatctatcaccttacatagttatctctcttttgtgtgtgtggtaaaaatac<br>ttaagatctactcttttagcaaattttcaagtatacaaaacattttttttcttgagacaggtctctgttgcccatgttggagtgctatggtgtgatcatg<br>gctcattgcagccttaactcctgggctcaagtgatcctcctatctcaggctcccaagtagctgaaattataggtatatgccaccgtgtccagtg<font color="green"><u>AATTTG<br></u></font><font color="red">AAAATTTTTTTTGTAGAAACTAGGTCTCACTGTATTGCCCAGGCTGGTCTCAAACTCCTGGCATCAAGTGATCCTCCTGCCTCAGCCTCCAAAAGTGCTG<br>AGATTATGGGTATGAGTCACCATACCTGACCATACAAAACATTATAATTAACTATAGTCATTAGGACCTATTGTTTTTAGAATATTGAGCTTTCTTCACC<br>TTTTAATCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGC<br>AGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACAC<br>CGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGG<br>GGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCAC<br>AATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AATTTG</u></font>catagatgtttcaggcatgcttgaaggaagttatag<br>atccatttttaggatatggattatgatatatattaaatgtattttctgtatttcaattctctgtaatttttttctacttgaactataaaaaattaagggg<br>ggagtgctttaatgtttgccattgctgttgcatttaggtagttctcttttcaaacaaaatgtaaatattatgatatgctattttgtttataaatggttaa<br>gttgctgtcttaattgtgagttagtaaattaatctgtttatgctctttattgcttttttcttgaattaagcattgtctgatactaatatcgcaacccctg<br>aactcttttgatttgcattttcctggtaaaacttagctatcctgagcatacccagtgg	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	55	1126	462	NA	intergenic	
0	chr20	12729657	12735692	2000163	0	-	L1HS110; RIP_L1_chr20_012_01	GGATTCTGACCTTATTCTAACAGCA	AGTTGACTGTTGGTGTTGATTGTGT	LINE	L1	L1HS	tagctgggattacaggcgcccgccaccacgcccagttaatttttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtcttgatctc<br>ctgacctcgtgatccgcaaaatgggatcaatctttttctaaaattatcttttagttataaaaggaagacttgcaaggagcgctgctgctatgattccatg<br>ttagaccttcatgcagaactctgtaacctagctctttatgggtaagaattgtcccttgttcattattttctaattattaaggattacatcatttccagtt<br>gactgttggtgttgattgtgttttattacattttaatcctaggaatattaagaagccacatgtggttggtgtaggttgctgtctt<font color="green"><u>TAAATCCAGTGACCC<br></u></font><font color="red">GGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTACC<br>GGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGA<br>AGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGATGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAG<br>ACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGA<br>GATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGG<br>AGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTT<br>AAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGCGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGA<br>CCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTC<br>CTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACA<br>AAGATGGGAAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAA<br>GCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGT<br>TGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAA<br>CTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGA<br>AGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAG<br>TGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAA<br>ATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGG<br>CAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCC<br>AATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTACAGAC<br>AAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGC<br>AAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTC<br>ACACATAACAATGTTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGC<br>TGTGTTCAGGAAACCCATCTCACGTCCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAG<br>GGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACA<br>AGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCAC<br>ACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGC<br>ACCAAGCAGACCTAATAGACATCTACAGAACTCTTCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCA<br>CATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATT<br>AAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGT<br>TCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAACGTCTACAA<br>GAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAA<br>ATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAA<br>TTGATAGACCACTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGA<br>AATACAAACTACCATCAGAGAATACTACAAACACCTCTATGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCA<br>AGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACTAACCAAAAAGAGTCCAGGAC<br>CAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCC<br>TAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGAT<br>GCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCT<br>GGTTCAATATACGCAAATCGATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAGCCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGA<br>CAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCC<br>AATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGG<br>AAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGT<br>TTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAGTCACAA<br>GCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCATAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAAC<br>TTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCATG<br>GGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAA<br>TTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTAC<br>CTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGA<br>AATAACGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAAC<br>TGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACCTAAAA<br>CCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAACAATGGCAACAAAAGC<br>CAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACGTACAACATGGGAGAAAATT<br>TTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGG<br>TGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAAT<br>CAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACA<br>CTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAG<br>ACATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAA<br>GACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAG<br>TTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAAGAAAAAACCAAACACCGCATATTCTCACTCATAG<br>GTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGA<br>GATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTA<br>AAACTTAGAGTATAATAAAAAAATAAATAAATAAAA</font><font color="green"><u>TAAATCCAGTGACCC</u></font>tagtggttttattttgtcttgttttttaaacacaaatctgactggacgg<br>ctcgatggttggaaactcatcagcagcttcccattgctgttagaataaggtcagaatcctcaacctgccagaagcatccctgccctttgtccccacattc<br>ctaccctttacaattagcctggcttataagggctgcatgtgaagaaatacacatattttcttttccactgctaaaattctcacttgcattcttggtgctg<br>tgagcagaggtggtgtctgctgtgttcactccttaaatacatagtctagcactgtgcctggtacatagcagatgctcattacaaatattttaaaataatt<br>cagtaaccgagtaaaacagtctaccatgttaataat	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	56	6263	212	NA	intergenic	
0	chrX	124905402	124905627	2000164	0	+	L1HS125; RIP_L1_chrX_124_01	CCTCACGTTTCTCCACATTGTA	TTCTGGCCTTCATAGTGTTTTA	LINE	L1	L1HS	aactattaactttttaatgtactccttgactagagtgtcatggtcctgatatgaaaaaaagaaccaaatatgcctaaatcaatgaagccttattatatta<br>tgcatcatctctcctcagtgtatgtgctgtatgtaaatatctcatatactgatggcaatgcttaactgaatatctaatattttaaagtgatattgttttg<br>ggtcttataataaaagtgcaatttaatatactagtattattagacaagtaggttaagaagatgccatagacataatgaatcggggtttcaaccacatttt<br>gaaaagaaaccttacaaggtatcttggcataaaattctggccttcatagtgttttaaaaataatagttgttcaataacgttttattgcat<font color="green"><u>AGAAATTGAA<br></u></font><font color="red">CGTTATTGAACAACTATTATTTTTAAAACACTATGAAGGCCAGAATTTTATGCCAAGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTA<br>ATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAG<br>TATAATAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AGAAATTGAA</u></font>tgaaattacaatgtggagaaacgtgaggttagagagatgtgagttagaaaacttcaaaacatac<br>atgaagagtattggttaaatagatgaaatttatgtctgaagagtctttatggggagctatatagctcatttattgggcttaatgacttacatttttatca<br>acaaatttagtttagacaaagaacataaataagtttatcaggtttgtggaagacgtagcgtggcaaaatacctaatatagaatcacgatttaatgagaac<br>aatctgagaggctgtaatgattagtaaaagctacagtgatggactctactaagtcataaaaaattaactgcaaatgtgtaagggtaaaacttcctaagat<br>ctgctcctgtaaaacagatattttca	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	60	332	96	NA	intergenic	
0	chr6	66844286	66845022	2000165	0	-	L1HS157; AL049842; RIP_L1_chr6_066_01	ATTCAAGTTCCAGTAAGCTGTGTTT	GAACTTTGGAAAATTCACAACTACC	LINE	L1	L1HS	acaataatagtcggcgacctcaaaataccatgcagcaatcgacagatcagccaagcaggaaatcagtgagcaaacattgcacttaaattacactttatac<br>caaatggaccaaacagaaatacagagaacattctatccaacagctgcaaaatacacattcttttcaagtgcacaggagaccttacccaagatagatcacg<br>ttaggctgaaaaacatgtctcaacaaacataagagaattaaaatcatatagaatatattttctgactacaatggcacaaaactagatatcaataaaaaga<br>ggaactttggaaaattcacaactacctgaaaattaaacaatatgcttttgaacaaccattatgtcaatcaagaaattaaaggggaaat<font color="green"><u>TAAAAATATGTT<br></u></font><font color="red">GAAACAACAGGTGCTGGAGAGGATGCGGAAAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCG<br>ATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACA<br>TGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACA<br>TATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATC<br>GCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGA<br>CTGTGGTGGGGTTGGGGGAGGGGGGAGGGATAGTATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTA<br>TACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAATAAAATAAAATAAAAAAAAATAAATGAAAAAAAAA<br>AAAATAAAATGAAAGTAAAATGTTATTTAAAAAAAAA</font><font color="green"><u>TAAAAATATGTT</u></font>aagataaacaaaaatagaaacacagcttactggaacttgaatatgttaagt<br>gaaataagccaggcacaaagaaaaacgtcacattttctcatgtatttttgggatcaaaaaattaaaataattgaactgataaacatagagagtagaagga<br>tggttagcagaatctgggaaggttagtggagggttgcacagcgggtggaggggcagagatggggatagctaatgggtacaaaaagttgaaagaataagat<br>atactatttgatagcacaatagggtgattatagtcaatagtaacttaattgcacatttcaaaataacttaaagagtgtaactgaattgtctgtaactcaa<br>ataacaaatgcttgacgggatgaacaccccattctcc	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Boissinot S, Chevret P, Furano AV. L1 (LINE-1) retrotransposon evolution and amplification in recent human history. Mol Biol Evol. 2000 Jun;17(6):915-28.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=10833198">PMID:10833198</a>.</LI></UL>	E:Library screening:TE-specific hybridization; E:Insertion-specific detection:PCR	NA	60	892	143	NA	intergenic	
0	chr6	125651491	125652361	2000166	0	+	L1HS160; RIP_L1_chr6_125_01	CTAAATAGGCAGAGGAAAGGAAAAC	TAAACTTCCAAGAGATCAGCACTTC	LINE	L1	L1HS	ctgaacagctgatgtggggcacagacaggggagggggagaaaggggcagggaggtgacccgaggcccactgatggggtgctggcagccctgaggctctgc<br>agagcctggtggccagggcggctgtgaccccagtccccacggcacagagtctctgaatcagtgtttcgcagccttctggtaggacaggagaggactcaga<br>ctggggtttcaaagagcaacagagggacaaggagtccaagcaggatggagattcaaattctaggtcctgaaaatggaggactaaataggcagaggaaagg<br>aaaacaggaagattaaacatttcgcaacctactcatctgacaaagggctaatatccagaatctacaatgaactcaaacaaatttacaag<font color="green"><u>AAAAAAACAAA<br></u></font><font color="red">CAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACACTTATGCAGCCAAAAAACACATGAAGAAATGTTCATCATCACTG<br>GCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAG<br>GATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCCATTCCTCAGGGATCTAGAACT<br>AGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCG<br>GCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTAGATTAAGAAAATGTGGCACATATACACCATGGAATACTATG<br>CAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAACTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACA<br>CTGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACTTGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGG<br>GGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCA<br>CAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAATTAAAAAAAACAAAACAAAACA</font><font color="green"><u>AAAAAAACAAA</u></font>aaaaaaacatttccttct<br>tcctggggaaaaggttggccctgagtgaagtgctgatctcttggaagtttatcttttgcatcttcccctctccaacctcctagtgactctccctccaggg<br>ttctggggtccttatgctgctctacatcaagccccacctgtactttgaagaatgaattggggggagacatttttaaaagggtacttgttaacctaactgt<br>atctccaattgactgaacttctgacaatgtggagagaaaacttggggttagaaacaatccaaggacggtggggtgtactaggcatttcacatgcaggaga<br>ggctcccctcacgccttggggctcaaaaggacatttctttaaggcaaaatgcaggtggtggagaagacatc	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	60	1071	99	NA	intron:HDDC2:NM:016063:4/6	
0	chr14	19624318	19624498	2000167	0	-	L1HS131; L1HS173; RIP_L1_chr14_019_01	CACCATCTAGTGATTTTATGTTCTGC	AATAATCCCCATTGACTGTGTACTG	LINE	L1	L1HS	aaaaaatttaaacatactaagaccctcgttctctaagaatgtcttatttggcctagattgctagattattttcttaactccaaatacaaaattacaagtt<br>ttcttttttattaattgcaataaaatataattctttgcaattaaattttcccctttttagccctttctttagttatgattttgggatttgtgttttatta<br>cttatgatcctatataatattgtaaatgccaatagtgtgatagacatattatgtatgtagagtaattaatatatcaggattatgtaacctaccagtttac<br>agttacctttaagaagtaacaccattatgaaatcctggatacttaatcttcaccatctagtgattttatgttctgctctgggttt<font color="green"><u>GAAAGGCACAGAGGC<br></u></font><font color="red">GGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCAC<br>ATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>GAAAGGCACAGAGGC</u></font>ataa<br>aggagaaaactaatttcattgttattacattcctcagagactggcagtacacagtcaatggggattattaaaatatcctttatgccattatggaaaatgt<br>aacactgtattttacctatcaaattggtgacattttaaaggcaacagtcagtactcaggagggtatagaaagagaactagagatgaattatgagattttt<br>gtgtgatagtcatacatactattgctgaaattattttccacaataaacactgataactattctattcatgcaaaatattaatatttattctgtgttagta<br>atcttattttatatggacaaataaaaatgtatgcatttattatgtgcaacatattttaatatatgtatacaccgtggaatg	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	58	381	179	NA	intergenic	
0	chr3	81852584	81853099	2000168	0	+	L1HS177; RIP_L1_chr3_081_02	CAAGTTCCTCACCAAATGAAACTAC	TCCATTTTACTGATGTTGAATAGGC	LINE	L1	L1HS	tgtgtatgtgtgtgtgtgtgtatatatatatatatatatcttatatacacaaacccattgattttacagccaataacctaactccgatgaaacagaatag<br>gtctgaaagcacaggtacagtttggcaagtacagtggtcctctgcattgtgtgcatgtctcaatttattacatctcctccattacctattttattctttt<br>aactatttacccaaattgaaattgagataaggtatttaaatgttactgagcaactctactctgtaggtcttgtaatgatgtaatgtatgaatgtaaaata<br>acactgatacatttcacttaccatattatcaagttcctcaccaaatgaaactactataaccaagagcataatgctacaagcagattta<font color="green"><u>AAAGAAAACCCA<br></u></font><font color="red">CATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCA<br>CATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTA<br>TCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGG<br>GACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATG<br>TATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAATAAATAAATAAATAAATAAATAAATAAAAACACAT<br>GAAAAAAAAAAAAAAG</font><font color="green"><u>AAAGAAAACCCA</u></font>aagctaaatttcatgtaagtacaactaaatctgtgtgctaataatgtcatactgatacttaatttagtagcc<br>tattcaacatcagtaaaatggaaactttaaattcacctaagccttgtattgcttatggggaacagtttttcaattctgtgatcccaaagtgctctgacca<br>gacatactgatacaaataattactgttttggcctattcataattaaaacaagtgaaatagtgaactcacataggcacctcattacttatgggtcaacctt<br>tcccaagactgagttcacggagagctttgaccaaactgctcaaatggtatataattatacagtattataaatttatctgctgacatattttccctaccag<br>attataggtgccataa	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	58	693	165	NA	intron:GBE1:NM:000158:1/16	
0	chr5	15959550	15965662	2000169	0	-	L1HS197; RIP_L1_chr5_015_01	TGGAGTAGAATTCAAGCAAACTGAA	AGAGTTTATGATAGGTCCCCATTCT	LINE	L1	L1HS	acgctgggctctgattctaaaggtcaccttatattgacctgggatacatttcgcatgggtagttccctgggcctactacagtctaagttcataatctctt<br>ctttaaagaccccagagcccctttctagggcagggcttttccagtgaatggacccaatattaaatagcacaaagactggcgtttcggtgggtccctgagt<br>gcgggaggcaggacttttatggtggagtaacatgggcctaattctagagtgatcatcttagttttcagaacttgtcatacttcttttttttttaatagaa<br>agctccattttaatgcaaagttaataataatgttttggaaattcagttgtggagtagaattcaagcaaactgaaatacttgtgg<font color="green"><u>AAAATCCTTCTAGGTC<br></u></font><font color="red">GGTGGGGAGGAGCCAAGATGGCCAAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAG<br>GTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACC<br>TGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTT<br>TTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACGGCAG<br>TCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCTGGGAAGCTCGAACTG<br>GGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCA<br>GACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTC<br>CCTGACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGA<br>GGGTCCTGTCTGTTAGAAGGAAAACTAACAAACAGAAAGGACATCTACACCGAAAACCCATCTGTTCATCACCATCATCAAAGACCAAAAGTAGATAAAA<br>CCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGA<br>ACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGACCTACGGGAGGACATTCAAACCAAAGGCAAA<br>GAAGTTGAAAACGTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTC<br>GAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCAAGA<br>AGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACATCTGATTGGTGTACCT<br>GAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTC<br>AGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTT<br>AAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGG<br>GGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTA<br>TAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCC<br>GCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCA<br>AATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAG<br>TGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAA<br>GGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATT<br>CAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACT<br>CCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGC<br>TCTGTACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATT<br>GACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCA<br>GGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAA<br>GATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCC<br>TACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGC<br>AAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGA<br>TCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGA<br>TCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATAC<br>ACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGA<br>GTCCAGGACCAGATGGATTCACAGACGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGG<br>AATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATG<br>AACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGA<br>TGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAA<br>AGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAA<br>CCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACA<br>TAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGA<br>CATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTGTCAGGATACAAAATCAATGTACAA<br>AAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAG<br>GAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAATTGGAAGAACATTCC<br>ATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTC<br>TTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCA<br>TCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGA<br>GCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGGGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGC<br>TGGGAAAACTGGCTAGCCGTATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTA<br>AACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGC<br>AACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGG<br>GAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCA<br>AAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGA<br>AATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAA<br>ATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCAT<br>TTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCAC<br>AATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAA<br>AATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCT<br>CACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATA<br>GCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAATCTGCACAATATGCACA<br>TGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAATTTTTTGTGGATCCTGAACAACTAAAAAATAATAATTATGGTAAAATACATGTTACATAA<br>AAAAAAAAAAAAA</font><font color="green"><u>AAAATCCTTCTAGGTC</u></font>aactatgtaaaatagctctatagaatggggacctatcataaactctgcaaagcacccatatctcaacagcc<br>tataatttctgagtcatgtttctctttagaaagatacttagaagtttatatttataggctgtatttcttaatggcatttaaatcaagtttgaaaaaataa<br>atttaaatgtaactatataacatagcattgaccaatgtgtaaagctcctcaataaaattttgcaatatcattaaaaaaaaatgcctgggtttggaaccag<br>gagggaaggaagtgtacatttgatatgttggcgatgatctttatttagaaccacttttctaggcaatctttgcttttagttcccttttaagcaaattcaa<br>ggcttataactca	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	60	6226	97	NA	intron:FBXL7:NM:012304:2/4	
0	chr3	2023592	2025194	2000170	0	+	L1HS213; RIP_L1_chr3_002_01	AATGCCTGATAAAAGTAGACACACC	GTGGGAATATATCTTCTTGGGTTT	LINE	L1	L1HS	acataacaaatatagggaaactgaagaagactaaagacaaaagatgactctgtggtttttggcttgctcaatgtggcagatggtggaaccattcagaaac<br>acaggacaatggaaacagaggagattagggctggtaaggtcagtcttgaatctgctagaatttttttggccttacagacagtcatgtggtaaagtctagt<br>aggcaaatgaatatacagcatggatctgaaagcagaagtctgtgctagagatattggctgtcacatgagtagatgtcaaataaagttgttcatatgcgca<br>aggctgcctaagagatggatttagataaagttaagggctttctggaactacatataatgcctgataaaagtagacacacct<font color="green"><u>GCAAAAGAAACATAGAAGG<br></u></font><font color="red">CCATACTGTCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATG<br>GAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACA<br>GTAACCAAAACAGCATGGTACTGGTATCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGA<br>TCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACT<br>GGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGC<br>ATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAGTGGGATCTAATTAAAC<br>TAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAAAATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCT<br>AATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAA<br>GAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACAC<br>CAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACT<br>AGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAG<br>GACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAA<br>TGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAA<br>ATTGGAAACCATCATTCTCAGTAAACTATCACAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGA<br>CACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAG<br>TGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAA<br>AAAA</font><font color="green"><u>AAAAGAAACATAGAAGG</u></font>ggtcagaatggaaaaagaaaacccaagaagatatattcccacaaaagccaaagcaaaagaccaagagaggattttttta<br>ttctcctatatttgcagctttgaagatcatctctacatgtaataacatcatattagtctggcattcttctcctagcattaaatattaaatttagcacaca<br>ttcttacatatattaccacatgtagacatagagatctttcagaataaacgagtattacagatgttcacattatttatctagagattttagtcattgttat<br>cctctaaactagagatctgcaaatgttttccacaaagggccagagagtaagtattccaggtgttggggaccatgaggtctctgtcacaagtactcaactt<br>tt	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	60	1710	89	NA	intergenic	
0	chr3	34669367	34673181	2000171	0	-	L1HS214; RIP_L1_chr3_034_01	TAGCTGAGAAACCATAAGCCTAGAA	ACCTGAATGTCCACTCATTCACT	LINE	L1	L1HS	tttataacatatgtatattctattaaatacattgtgtaaatacaaacattcatgcacattctcttatatgtatttagacagtgctcagagccatacacaa<br>taacttgttgacttttgtaacctctatggattgggattggaatgtttagaatggagaaaaagactgttattatttaacattttaatacttatgggcatgt<br>attactttctaaaagttattttatttataaaagcctgatgcatttaataacataataaggagaaaaatatagctgagaaaccataagcctagaaagatag<br>aatttcagttatcaaagataattaatttttacattttaatgtatattctcatatattgaacaaaatttaaacagatatatcttt<font color="green"><u>AAAAGTTATATGTATA<br></u></font><font color="red">TAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGT<br>TTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCA<br>GTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCG<br>ATGCGGGCTCTTTTTTGGTTCCACATGAACTTTAAAGTAGATTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGT<br>AAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTGTCCTCTTTTATTTCCTT<br>GAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGT<br>TCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGC<br>TTATCAGCTTAAGGAGATTTTGGGCTGAGATGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAA<br>TTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTG<br>CCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCAT<br>CAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTT<br>GGCTCTGTTTTTATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTT<br>TTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGT<br>CTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGG<br>TACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCA<br>GAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGCTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTA<br>GTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTAT<br>TTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGTGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGA<br>AGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTT<br>CTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGT<br>GTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGG<br>AGCAGGTTGTTCAGTTTCCATGTAGTTGAGTGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTA<br>TAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTC<br>TGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTT<br>GATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTGAGGACTTGCTTTATGAATC<br>TGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTAACCATTATGTAATGGCCTTCTTTGTCTCTTTT<br>GATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTATGGATTAAAGATTTAAACGTTAGACCTAAAACCATAAAA<br>ACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTG<br>ACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAAC<br>CTACTCATCTGACAAAGGGCTAATATCCAGAAACTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGAC<br>ATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCA<br>CTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACA<br>CTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCA<br>TTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGA<br>ACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATC<br>CTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAAC<br>TGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACC<br>TAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAG<br>AGTATAATAAAAAAA</font><font color="green"><u>AAAAGTTATATGTATA</u></font>aatttatatatatttatatctacttatatctaagcatatatgtatatatgcttacctatggaacattta<br>taatgtgaatatgatatgatttatatataaattgatcacatttgtgtatacaaattcttatcattgttactgctttatggtctatcctaatttatttaat<br>catcgagtgaatgagtggacattcaggttgttgaaattccctttcaacagatatttagactattccacctctacacaataaaacaatacagagtaatgac<br>agctacaaataagttaaaaatgaaagagaaacctctacaaataagacaaaagtaattaaaaacttagaaagtattaaccaattatcccacatgttactta<br>atttcagttgttaga	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	60	4159	328	NA	intergenic	
0	chr13	56691457	56692640	2000172	0	-	L1HS228; RIP_L1_chr13_056_01	AATATCCACTACCCAATTCCATAGG	GCTGCAATTTAGCAGGATTTCT	LINE	L1	L1HS	aacagattccgttttctattaattctatgtaattgttatgcgaatgaggaaactacatccttcaaaatgtttgcaaaccaggaaacatcatatgtatatt<br>caagttagaggaaaaagtggaaagaataagggaatttctagaaaaacaaagacgctctgggagtgcagtcatgaattgaatttgccatcctaaacagcag<br>tacttatgactaaaaattgtttaaacatttaaaaacttttagaagatattttaatcgagaaaataatgctgcaatttagcaggatttctgcagattttac<br>tagaattctatttgtgtgatattttctttgccttctgtagaaaaaaaaaaaaaaacaacaactcttccataagaattttaccatt<font color="green"><u>GAAAACTGGCAACTG<br></u></font><font color="red">TTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGC<br>ATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTT<br>GTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGGTCACT<br>CTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACA<br>TGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACATTTAAATCTTTAATCCATCT<br>TGAATTGATTTTTGTATAAGGTGTAAGGAATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAG<br>TGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAA<br>AGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATG<br>TGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATTAAATTGGAAACCATCATTCTCAGTA<br>AACTATCGCAAGAACAAAAAACCAAGCACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACT<br>CTGGGGACTGTGGTGGGGTCGGGGGACGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGC<br>ACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>GAAAACTGGCAACTG</u></font>a<br>atactcaaacagagcaaacacaaaccctatggaattgggtagtggatatttggaaggaatgtttcttttagccaagaccaagttttggaaacaaactgac<br>aacactaactgccttttaataaaaatcatttcactgcctcaatatgcgtggcaaacggctgcaagtgtcaggttcagataagctgaaagcaagatggctg<br>aaaggtacattttctaatcaacttcctgaattatctttgactcctggtatggcctcacatgtgacttaattatgaagcataacatgcaatattttcataa<br>caaaaaatgaaaattggtcttttaattctttggaaatggttcatgatgttatccttgccctgttacttcaatgaatttcggata	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	60	1383	184	NA	intergenic	
0	chr13	87649209	87651105	2000173	0	-	L1HS231; RIP_L1_chr13_087_01	GAGTATGAGAGCTCTGCTTTCTGTC	CTTGAAGGACTGGGATACTTGAAA	LINE	L1	L1HS	gcgtgttcattttgtgagtgtgtgtatgtgtgagtgtgtgttgagggagttgtgtgtttgtagtaggaagtaatcaggattcaggggacaaataagtcat<br>ttattaaatactttatttcacattagcgagaacaataaggtatcttctattaacaaaatgaaaagaaccacatttatcttcattaacaaagatccagaaa<br>aatagaagtcatctagttctctaaaagctcagaaaatattccagtttgtatatcttgaagtttatagaattgcccggaaaaacttaactggttcaagaat<br>tgtaatcttaccatacatacctgaaaaaacagacaaaatacatgttttcagatattggacaacggaccttgaaggactgggatactt<font color="green"><u>GAAAGAAAACAAA<br></u></font><font color="red">GCCCACTTGATCATGGTGGATAAGTTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATT<br>GGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTA<br>TTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCAGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGG<br>TAAACTATTGATTATTGCCACAATTTCAGATCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGG<br>AATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATAT<br>CCCCTTTATCATTTTTTATTGCGTCTATTTGATTCTTCTCTCTTTTTTTCTCTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAA<br>CCAGCTCCTGGATTCATTAATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTT<br>GAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAA<br>ATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCAT<br>TTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATT<br>GCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGT<br>GGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCAAAACCACTATGAGATATCATCTCACACCA<br>GTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAG<br>TTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGA<br>CTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAACTGTCCAACAATG<br>ATAGACTGGATTAAGAAAATGTGGCACATATGCACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAAT<br>TGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACTGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACA<br>CAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTG<br>GGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAA</font><font color="green"><u>GAA<br>AAAAAACAAA</u></font>atggggtaagtcctacaactttcctagattgctgcagaaatcagtctctaagcccgagcaaaggtgtatgaaactagtctagtgatcttg<br>ctgagatgaggagacagacattagggtttagaaaggaaaggttaagatggctattatttatatagcagaatactggagataaagaagctgcataaacaaa<br>aacagatcacgaaaaactggccagggaaaccccctctccagtctttggtagagtaccaatctctgcatgcatgggtaaaatttcaaggccaaagaaagca<br>ccactggcaagcaagtaaacaatttttaccagacagaaagcagagctctcatactccataggatattaagtagaatctacagaacaactgtgtttag	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	60	2289	379	NA	intergenic	
0	chr11	36529736	36534760	2000174	0	+	L1HS291; RIP_L1_chr11_098_01	CTCCCACTACTTTATGGGAAGGT	AGGACTTCCAATTCCTAGTATGCAG	LINE	L1	L1HS	taataataagaaacatatttttgatggagaatagaaatagatttagttagtagaaatagtacttgttaacttagtgaattcagaggagatattaaagagg<br>aaagcgcagtgtttacattcatatgaactcaagtgttaggtgagccaagaacacagcagaagagccaataaaaggagcaaaaggttcattgacaattgta<br>ttgatcaggcacatttctggctacttcaattgagagcactacccatatattaatatagttataataaaaaacacatacaaatgaactgtggccatttaag<br>gaaaacaacacatggtttggctcccactactttatgggaaggtctggggaggagtttgtgcaatgtaaaaaaaaaaaaatgtatc<font color="green"><u>AAAAATCACAGTGTT<br></u></font><font color="red">GAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTG<br>ACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGT<br>CCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCAC<br>AAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAATGCAGTTCCTCACCAGCAACAGAACAA<br>AGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAG<br>TTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCAGAAAACCAAGGCTCGAGA<br>ACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGG<br>AAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAA<br>GTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCGATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGA<br>AATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGG<br>GCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCAGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGC<br>CAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGA<br>CAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTG<br>CAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATAACCAGCTAACATCATAATGACAGGATCAAATT<br>CACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTG<br>CTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCA<br>GGAGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAAC<br>AAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTGAGTGACCTACAAAGAGACTTAGACTCCCA<br>CACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTG<br>CACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACC<br>ACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGAT<br>TAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATG<br>TTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTATGTAGAGGGAAATTTATAGCACTAAATGCCTACA<br>AGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGA<br>AATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAA<br>ATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAG<br>AAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCC<br>AAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGTCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGA<br>CCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCC<br>CTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGA<br>TGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGC<br>TGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTG<br>ACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGC<br>CAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTAGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTG<br>GAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTG<br>TTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTGCAAAAATCACA<br>AGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAA<br>CTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATTAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCAT<br>GGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCAAAGA<br>ATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCACCAAGTCAATCCTAAGCCAAAAGATCAAAGCTGGAGGCATCACACTA<br>CCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGTTACTGGTACGAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAG<br>AAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAA<br>CTGGCTAGCCATATGTAGAAAGCTGAAACTGGATTCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACCTAAA<br>ACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAG<br>CCAAAATTGACAAATGGGATCTAATGAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAAT<br>TTTCACAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGG<br>GCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCACCATCACTGGCCATCAGAGAAATGCAAA<br>TCAAAACCACTGTGAGATATCATCTCACACCAGTTAGAATGGCGATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAAC<br>ACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCA<br>GCCATCCCATTACTGGGTATATACCCAAAGGGCTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAA<br>AGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGA<br>GTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATA<br>GGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGG<br>AGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCT<br>AAAACTTAGAGTATAATAAAAAAAAAA</font><font color="green"><u>AAAAATCACAGTGTT</u></font>tgtgaactcaaaacttctatactgccaatctcttttaaactactatattatctgctga<br>aaagtcataattttcaataaaatgtttaataaatatgtgttgtcccatctatgctgcatactaggaattggaagtccttttagttactggcagatgttac<br>agcccactaccttgtttgcttgcccaggaaactgatgtcagcaagaatgatcaggtctacaaaacagtaagattagactaggtagtaagggcaatgcatg<br>ggttgaattttgtcttacaaggaaaacaatgttgaccttctaacctccctggtcagaatgtgactttatttggagattgggcctttacagaggtaatcaa<br>tgtaaaatgagttgatgagattgggac	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	58	5658	216	NA	intergenic	
0	chr2	133773961	133776882	2000175	0	+	L1HS337; RIP_L1_chr2_133_01	GGTACAATATGAGGCATCACGTA	GTAGCATCCTTTATAGCTTTGCTGA	LINE	L1	L1HS	ggtggatcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaacactgtctctactaaaaatacaaaaaaaaattagccgagtgtggcgg<br>aaggcacctgtaatcccagctacacgggaggctgaggcaggagaactgcttgaaccagggaggtggaggttgcagtgagccaagttcctgccattgcact<br>ccagcctgggcaacaagagcaaatctctgtctcagtcaatcaatcaatcaatgactttaggggcttactgagggtgggtgagacaaatgtacttaataaa<br>acaatttcggtacaatatgaggcatcacgtaattaagcaccagcatatttatttcatagaccgctagcaagactaatgaaaaagagag<font color="green"><u>AAGAATCAAATA<br></u></font><font color="red">GACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAG<br>AAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGA<br>AATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCA<br>TTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCTCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACA<br>CAACCAAAAAAGAGAATTTTAGACGAATATCCTTGATGAACACTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAA<br>GCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATATGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAA<br>GACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATTAATTAGGTATTGATG<br>GGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCAC<br>AAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGCGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTA<br>GGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCA<br>ACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAAGCATGGGTGAACT<br>CCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAG<br>GAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAACATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACA<br>GATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGC<br>CAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGG<br>TACCAAAACAGAGATATAGATTAATGGAACAGAACAGAGCCCTCAGAAATAATGCCACATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACA<br>AGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATAC<br>AAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTGAGGACATAGGCGTG<br>GGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAG<br>AAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACT<br>CAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCAAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAA<br>CACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCCATCATTAAAA<br>AGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGT<br>GTGGCGATTCCTCAGGGATCTAGAACTGGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAA<br>GACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGT<br>GGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAA<br>ACTATCACAAGAACAAAAAACCAAACACTGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTC<br>TGGGGACTGTGGTGGGGTCGGGGGAGGGGGGATGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCA<br>CATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAATAAAAATAAAAAAAATAAATAAATAAATAA<br>ATAAATAAATCTTGAAGCAAGC</font><font color="green"><u>AAGGATCAAATA</u></font>atttgggctctagttttcacattacaattttgccattccaagatgatagtttcttagaatctaaca<br>gtttttagccagacaaggacttagtatatattctgtagtctaactgaaatattttagatcagcaaagctataaaggatgctacctgagcaagcaaataag<br>aacatgaattgaactcacctccagagactcctgtgttgctcctcaagctgagtcagcagatgctcaatgtatttattggagtccatgtattcctgcacaa<br>gcagacaaagacagatgaaaactcactatgacagtccccaccatcctaagaccctgaccttatctctacaaggagtatttttgacaacattatccctact<br>tcccttccggttctaggattct	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	60	3174	210	NA	intron:NAP5:NM:207363:4/20	
0	chr2	142505137	142505577	2000176	0	-	L1HS348; AF417123; RIP_L1_chr2_142_01	GAAATGGGAAGAGGAGTTGACA	CCTATTTTTATCTCAGCTGATGTCG	LINE	L1	L1HS	gtggggcattctccctatgcatgtgtctgtttcttttcctcacattcttttatgaagacaccagacatatgggattaggggcccattctactccactatg<br>acctcatcctaactacttcttcagtaactctagttccaaataagatcagattctgagagactggggattagcatttcaacacataaaatcaggggcacaa<br>ttcaaactgaatcagatgttgaacaatggacgtagagagtttggaaaggcagctgcgggaaatgggaagaggagttgacaatatgtcattttttttttag<br>aaatgacaatatgtcattttttttttagttgacaatatgtcatttttttctcttcaatacattaagagaatcttatcaataaataagt<font color="green"><u>AAAATCACACAT<br></u></font><font color="red">GGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACAT<br>TAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAA<br>AAAAAAAATAAGTATAATCAACCTTTCTCTAAATATATCTGTTTTTACCAGATATATTGAGTTCAGCAATAACATGAGAATCCAAACTATTCCAATGATT<br>TGATTGTTTATCTCTGTCTCTTTCACATGCACATTTATCTCATTACACACACACAAGAAGAAAGAAAGCTATATCATATTATATAATGAGGAAAGTTAAC<br>ACAGAAACATAATAAACAGAAGACTTGTGTGAAGATTTGTA</font><font color="green"><u>AAAATCACACAT</u></font>atgacaaacacttaaaagtatataattcagagtaaaaatatgtaagg<br>gtataagaaataacatgaagaacttgaaagtatgctacaaccttaaaaaatgtctttgacaggtctataagaacaaaattgcgacatcagctgagataaa<br>aataggttgcaacgggactgaggaacatttggatttcaaatatctaataaattgtggctgggaaaagctaaagtacttcagtgacactgcttggtactaa<br>acagttagaacaaccagccccaatttcaaaataactaacataaccaagggctgcccttggcatcaagactgatttctttctaggtcatgagtcccaggca<br>tatcatctctaataaaaatcttacacagacaactttatttt	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Ovchinnikov I, Troxel AB, Swergold GD. Genomic characterization of recent human LINE-1 insertions: evidence supportingrandom insertion. Genome Res. 2001 Dec;11(12):2050-8.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=11731495">PMID:11731495</a>.</LI></UL>	E:Retrotransposon display:L1 display; E:Insertion-specific detection:PCR	NA	60	748	283	NA	intron:LRP1B:NM:018557:1/91	
0	chr2	107998438	107998554	2000177	0	-	L1HS349; RIP_L1_chr2_108_01	GGAGCTGGGAGAATTATTGAAAC	CCACTCTCAACTACTGTCCAACAAG	LINE	L1	L1HS	catgctgataactagttgaatacaagattcaaagtcaaaatgatttcccaaaagctagataaattttgtcacagttttcccagttggaaagacagtttca<br>ggaaagcttgtatgcatcatataatgtactaatagcaagtaaataccatctacatctgggaaactgaggcctacagaggttaagtgacttggctaagacc<br>atgcaactcttgtggccctcaatctgatgctgagctgcttttcaaagccatgtgtgtcttgttctatagtcccactctcaactactgtccaacaagttac<br>gctacaattctccgaaaaagtttcctaataagggcgtaatgaaaaatctagagatataaaagatcttaaaggttatctaaataatatacctaatgct<font color="green"><u>AGA<br></u></font><font color="red">TGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAA<br>AAAAAAAAAAAAAAAGA</font><font color="green"><u>AGA</u></font>cttacaaaaataaaagagatccagagagtttcaataattctcccagctccgtccattttcagaacccaaaagagcgtgat<br>tcctggccccatccttctactgtattctcttcagctccacgtgtggcactgcactatcagaagctgttttcaattacttctttcagtaatacctactgct<br>ctaaattctatcactggacttttagtcttacctggtttatgcttttaactgcctctatatgacaaactgataaatcaacacagcagtttggcttcaaaat<br>acataatgcaatatctcttttaaatagataactatagttttccaaccaaaaataaaggcagaatcaccacatattctctgactttagagaatttaaataa<br>gatacaatgactgtttt	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	60	229	114	NA	intergenic	
0	chr2	82920367	82921745	2000178	0	+	L1HS353; RIP_L1_chr2_082_01	TCCATGATAGAACACACTCTTCC	AATCCCTGTCAAAACCAATCC	LINE	L1	L1HS	ccctgtcaaaaccaatccttgcttaagagtttacttccggccaagagaggtggctctcatgcctgtaatcccagtactttgggaggctgaggcgcacaga<br>tcatgaggtcaggagatagagaccatcctggctaccaccgtaaaacccagtctctactaaaaatacaaaattagccaggcgtggtggcacgcgcctgtag<br>tcccagctactcgggaggctgaggcaggagaattgcttgaacccgggaggcacaggttgcagtgagccgagatcatgccactgcactccagcctgggcta<br>caacgtgagactctgtctgaaaaaaaaaaaaaaaaaatttacttccattgttaatctgtatttttgacttattttttgagtgt<font color="green"><u>AAGAATATCTTTCTTGT<br></u></font><font color="red">AAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTCTTCACTCT<br>GATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATG<br>AAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTTACGTTTAAATCTTTAATCCATCTTG<br>AATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTCCATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTT<br>TCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGACCTATATCT<br>CTGTTTTGGTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAAC<br>ACATGAAGAAATGCCCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAA<br>GTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCATCCATTGTGGAAGTCAGTG<br>TGGCAATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAG<br>ACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGACTAAGAAAATGTG<br>GCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAAATGGAAACCATCATTCTCAGTAAA<br>CTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCT<br>GGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCAC<br>ATGTATACATACGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAA</font><font color="green"><u>AAGAATATCTTTCTTGT</u></font>ggaa<br>gagtgtgttctatcatggaataatatacaaaagccattggctttctctcctttggtatcttttgcttttagattgttatcttagtgagtcttattgatat<br>gaaaatttaccctttaagcataacagtgggattgtgctattttatccgataaagtatatgatcaactatgcaccctgacatctcagaagagggtaaatta<br>gcattcttctttgagtgtggtgggatggaagaaatctaagggagaagacaaaggttcatagatgtacagatactggtgagatggcagattcacaaaatca<br>acaagtatcacaaaattttaaggtattaggaatagaataaatagatttgtggaggacatgtcggcatcacttcttgggt	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	59	1822	426	NA	intergenic	
0	chr3	26414511	26420540	2000179	0	-	238595; L1HS364; RIP_L1_chr3_026_01	CTTAGCCTCTGTCTTTAGGGAAAAC	CATGACCAACGGTGCATAATA	LINE	L1	L1HS	aaaggaaaatagaaaattatccaaaattgaggtgatctgcttaagaaaaatctaattttatttctctacccagtttgtatctcaactgtttctaatatca<br>tcacacctagataatctgactattcttaactttgttaagaatttttttttacttatgtgatccatgtggacacaaaatcttttttttttttttctaaatt<br>ttaagaatcagcactaagtgctaaggcacaggtcacaaattcaagactctacagagaaagcagataatggaaatgggtaaagcagccttggccatagaaa<br>aaccagtctacatgtggcagtaaatagcattggaaccttagcctctgtctttagggaaaacacctccagccaagtgtttctgattctt<font color="green"><u>AAGAAAACAAAC<br></u></font><font color="red">GGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCAGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACAGTGATTTCTGCATTTCCATCTGAGGTACCG<br>GGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCTAAGCAGGGCGAGGCATTGCCTCACCTGGGAA<br>GCGCAAGGGGTCAGGGAGTTCCCTTTCCGACTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGA<br>CCGGCTTAAGAAACGGCGCACCACAAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAG<br>ATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGA<br>GCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTA<br>AGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACAGGCAGACTGCCTCCTCAAGTGGGTCCCTGAC<br>TCCTGACCCCCGAGCAGCCTAAATGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGCCCTGCAGCTGAGGGTCC<br>TGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCAAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAA<br>AGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAG<br>CTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTT<br>GAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAAC<br>TACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAA<br>GTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGT<br>GATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAA<br>TACAGAGAACGCGACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGGAGGAAAAAATGTTAAGGGC<br>AGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCAGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCA<br>ATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACA<br>AGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCTGCTGCA<br>AAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCA<br>CACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCT<br>GTATTCAGGAAACCCATCTCGCATGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGG<br>GGTTGCAATCCTACTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAA<br>GAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACA<br>CATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCA<br>CCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCAC<br>ATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTA<br>AGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTT<br>CTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCGGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAG<br>AGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAA<br>TAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAAT<br>TGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAA<br>ATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAA<br>GACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACC<br>AGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAGTTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCT<br>AACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATG<br>CAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATTAAGTGGGCTTCATCCCTGGGATGCAAGGCTG<br>GTTCAATATACGCAAATCAATAACTGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGAC<br>AAAACTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCA<br>ATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGA<br>AGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGATGACATGATTGTT<br>TATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAG<br>CATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACT<br>TACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGATACAAACAAATGGAAGAACATTCCATGCTCATGG<br>GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAAT<br>TGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACC<br>TGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAA<br>ATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGCTGCTGGGAAAACT<br>GGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAAC<br>CATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGCC<br>AAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTT<br>TCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGC<br>GAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATC<br>AAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACAC<br>TTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGC<br>CATCCCATTACTGGGTATATACCCAAATGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAG<br>ACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGT<br>TCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGG<br>TGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAG<br>ATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAA<br>AACTTAGAGTATAATAAAAAAAAAAAAAAA</font><font color="green"><u>AAGAAAACAAAC</u></font>aaaaaatgtgattattatgcaccgttggtcatgggcattttttccccaagaccccatt<br>ctgattctgggcttgctttccagtgagttttatgtgcttcaaacaggaaacttgattaacccaaaagacaggcttccctaagcaacagaagtagcctaga<br>ggaggcatttacaccagaaaaaagagacattaaactacctcgttcctcccacaaaaagcacaaactccaataccatagttcaactgtggctgctttacct<br>gaatcaaaaatcctcctcttcaatggggataaaagggtatctcagttatccctagagctttccattagcagatttgttttaaggaataaaaatgtaaaaa<br>atccataccacagtaaaaagataatttaaa	UCSC	<UL><LI>Bennett EA, Coleman LE, Tsui C, Pittard WS, Devine SE. Natural genetic variation caused by transposable elements in humans. Genetics. 2004 Oct;168(2):933-51.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15514065">PMID:15514065</a>.</LI><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	C:Reference; E:Insertion-specific detection:PCR	NA	60	6139	97	NA	intergenic	
0	chr4	18779281	18780040	2000180	0	+	L1HS391; RIP_L1_chr4_018_01	GTGGACATCAGAGTATCCCTTTCT	AGAAGGGTACATGACAACTGGTTAG	LINE	L1	L1HS	atcagtaaaggctcgcttctgtattattgtggggtaaattgaattaaattcagaaaaatttcccaagtcccaagcctttatatctttatctttctatccc<br>caattcctaccatggtatctggcccaaattaggagctcaataaatatttttaaatgaataaatgttaggtgatacaaaggatgtcaacatgaataagatt<br>ttgtcttgacactcaacaattttgaaaaatgattatgagggctaattaaaacatatcagaataattccaatgtctgattatatattaaaagttacaaagt<br>agtatgtgagttctgtgattagaagggtacatgacaactggttaggaaagaagaactggaagacttaaagcagaaggcaacatt<font color="green"><u>AGAAAAGAATATCAAC<br></u></font><font color="red">CAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACA<br>CTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAG<br>CCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAA<br>GACTTGGAATCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAG<br>TTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAG<br>GTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGATCGGGGGAGGGGGGAGGGATAGCATTGGGA<br>GATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTA<br>AAACTTAGAGTATAATAAAAAAAAAAAAATGTAAAAAGAAAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AGAAAAGAATATCAAC</u></font>atgtgattgagaaagggatactct<br>gatgtccacacatataattcagatacattgcaatgttttccttcaaggaggggaccatgtctattatatctgcatccttgccacattatacagatattga<br>ataatcctagaggcacgcagtaaatagtaaatagattgtgtagttttgtacgtaacacagactggcttgattgataaaattgatcagctaccatgaaaaa<br>gttgggattacctaattaagctaatttgttgttgtttgttgtatttttgatagttagaagaaatctgcacagaggagaattttgccaattattacttaat<br>attctgatataaattattgagcaattttataaaagttcaaagaatcctcacaaccagcat	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	60	889	113	NA	intergenic	
0	chr4	147759280	147762642	2000181	0	+	L1HS406; RIP_L1_chr4_147_02	GCAAGTTTTACCCATAGTACACAGG	GTATGTAGAAGGCAGGGGTACACT	LINE	L1	L1HS	gtagcatccaaggcaggggatgggacaccagttaccttttacagttttccctccatctctggcaccaaagatgtttactccaccctctctgcagactctg<br>aatcacatgtcaggtatcctggatggccatgcctttttcctccgggagtttttaagaacacagctccacaatgccattgggcttttctgataaatgtctt<br>ctcttgcctctgttcccagatagatgtggtgatgtcatgttctcttggatcatttttatgccgtattgaatgagggatagatatacttgagtgaatggga<br>ccattctttcttctgcttatatgggtctcacctctccttcctgctgttggtggtatgtagaaggcaggggtacactcagcatt<font color="green"><u>GAAAAAGATCACAATCT<br></u></font><font color="red">TTCCCCATTGCTTGTTTTTCTCAAGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATC<br>TCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTT<br>AGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTATTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGA<br>TGGCATTGAATCTGTAAATTACCTTGGGTAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTGTC<br>CTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCA<br>ATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGA<br>CTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGAC<br>TTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCTGTGGCCAGAACTTCCAACACTATGTTGAATAGGAGTGGTGAGAGAGGG<br>CATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTT<br>TGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCAT<br>GTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCA<br>TGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCT<br>CTTTTTTGGTTGTGTCTCTGCCTGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAG<br>TTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTGGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTGGGTAAACTATTGATT<br>ATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTT<br>CTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCAGTGGTGATATCCCCTTTATCATC<br>TTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGAT<br>TCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCT<br>CTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTGGGCATTTAGTGCTATAAATTTCCCTCTACA<br>CACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGCTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACC<br>CAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTG<br>AGAGAGAGTTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAG<br>ATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATG<br>TCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAG<br>TGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAA<br>GAGAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTCATGCAGCCAAAAAACACATGAAGAAATGC<br>TCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACA<br>GGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTTAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAG<br>GGATCTAGAACTAGAAATACCATCTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGT<br>ATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCA<br>TGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACA<br>AAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGG<br>GGTTGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGT<br>AACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAA</font><font color="green"><u>GAAAAAGATCACAATCT</u></font>aggaaggcattgatcatggc<br>ctaaaatagttcaagagaaaacatggtcagaaaatatgttgttttatctttagtctatacaattctgaaaagtaaatttaatattaccagaaaacagatt<br>ataattcacattttcctgtgtactatgggtaaaacttgcatttgaggtcattatccacaaaacacaataaccatattggaaagcatcaatgggagccagt<br>attcatgggcagcagggtggatgtaaccagcacgaaataaatggtactagagcaccacaggggcaagaaaccctacattgtattaacacgaaccagttca<br>aaaagctactttttctttatggtgggagatatacaatcagccaggaacagcatatttaacaat	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	60	3589	209	NA	intergenic	
0	chr4	29142069	29143066	2000182	0	-	L1HS415; RIP_L1_chr4_029_01	TCAGACCCATATATGAGCATAACC	GCTTAGAAGAATTTTTAGCCAGGTG	LINE	L1	L1HS	taagagtacagtatataattttatctaatcccaaatagagatatgggtaaaaataattataaattttgggatatgatgaactggaagaaggaaaaattta<br>agtttacatgagaaatgtactgatattcctgcataaggtcagacccatatatgagcataacctaaccattaactaaaagagagcatttcaaggatattct<br>tattcattcatacatattaattgaagacctactatgtaatagacacttttgttggcactgtggatatctaacaatcaggataggaaagaatcactacttt<br>caacatgaattatttggcagagagagaggcaaacacataggtatgtatataataagttagatggtaatgagaactaataaaatgaagtag<font color="green"><u>AAAAAAGAGA<br></u></font><font color="red">AATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAA<br>ATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCAT<br>TTGACCCAGCCATCCCTTTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCAC<br>AATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAA<br>AATGATGAGTTCATATTCTTTGTAAGGACACGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCCCAAGAACAAAAAACCAAACACCGCCATATTC<br>TCACTCATAAGTGGGGAATTGACCAATGAGATCACCATGGACACAGGAAAGGGGAATATCACACTTTGGGGACTGTGGTGGGGTCGGGGAAGGGGGAGGG<br>AATAGCACTGGGAGATATACCTAATGCTAGATGACACATTTAGTGGGTGCAGCACACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGT<br>GCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAATTTAAAAAAAAAAAAGAAAAGAAAAAAATTAGGTAGAAGTTTCTGGATCAGGGTGAAATTTT<br>AAATTTAATTTTGAATAAGGGATTCAAAGAAGGCCTCCATGAAAAGACATTTGGGTCATGAGTGGAAGGTGATGAGAAGCAAATCTTATGGATTTCTGGG<br>GGAGAGATATTCTAGAAAGAATGGCAAGTTTCAAAGGCCTTGGAAAGGAAAGTGTCTGACGTGTTCAAAAAATAAGGCTAGTATGGCTAAAATTTTCTGG<br>AC</font><font color="green"><u>AAAAAAGAGA</u></font>ttagaggtagaaaaacccagggtcactcagagatcttaataaatattaaccagttcacctggctaaaaattcttctaagccaactggt<br>aatatatacaccagctccataacaactacttacaaatgaactaagtcttgaagagtagtttttattatttattttgcattacaccattagttcccattat<br>ctaaaaatacttatgttgaaatgcattttgtatgttgcagatgaatctaagttttttccaattagaactacgaatgccaataataaacaaatacacagat<br>agctttctagaaatctttattattgagttttccctcatattttaaaagtttatgtcacttatatattttggatttgagaaagacgacatgagatcacatg<br>ac	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	56	1360	590	NA	intergenic	
0	chr4	71229214	71234677	2000183	0	+	L1HS423; RIP_L1_chr4_071_01	CTCCCTGTCTTCTGGGTTAAAATA	GGAAGTCCCACTTTTTCAGTAGAG	LINE	L1	L1HS	tcttctaacaacactggaaaaagactcattctagcattaacactaaactgcaatctgctttcatctaattagctaaaccttaaggttgataacacaagga<br>tgtttgatacaattaacgttattattaaaaatactccctctgaaattgagaatataattcttaaaaataatgcagttatccacatcttgattcttgtttc<br>tgggtgaattttgacacatgacaccagctccctgccactgacaaccctccctgtcttctgggttaaaataacagcctgcagaaaaaacattcctaaaaca<br>attttaacctacaaaacttgagactctcactattactcaagtaaattcaagaagaagtaagaaatacaatgaaaaagagaacact<font color="green"><u>AAAGACCCAAACAGG<br></u></font><font color="red">AGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCCCTGACCCCCGAGCAGCCTAACTGGGA<br>GGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGTGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCA<br>GAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAAC<br>TGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTG<br>AGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAAT<br>GTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAG<br>CCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAAT<br>GAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAA<br>ACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTC<br>GAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTC<br>AAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATT<br>TTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGCAAATGCTGAGAGATTTTGTCACCAC<br>CAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCG<br>AGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAA<br>ATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAG<br>AGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCAAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACA<br>GACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATG<br>CACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCC<br>ACTGTCAATATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGA<br>ACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCA<br>AATGTAAAAGAACAGAAATTATAACAAACTGTCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTAC<br>ATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACC<br>ACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACA<br>CCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGA<br>AATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAG<br>AAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCAATCCCACAGAAATACAAACTACCATCAGAGAATACTACA<br>AACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCT<br>GAATAGACCAATAACAGGATCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAG<br>AGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTC<br>TGATACCAAAGCCAGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAA<br>CCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTA<br>ATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAGGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAA<br>CTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGA<br>AGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAG<br>AAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATGTAGAAAACCCCATCGTCTCAGCCC<br>AAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAAC<br>AGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAG<br>GAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGG<br>CCATACTGCCCAAGGTAATTTATAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATG<br>GAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACA<br>GTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACACAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGA<br>TCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACT<br>GGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGC<br>ATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGAGATCTAATTAAAC<br>TAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCATCCTACTCATCTGACAAAGGGCT<br>AATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAA<br>GAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACAC<br>CAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACT<br>AGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAT<br>GAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAA<br>TGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAA<br>ATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGATGGGAATTGAACAATGAGATCACATGGA<br>CACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTTGGGGGAGGGGGGAGGGATAGTATTGGGAGATATACCTAATGCTAGATGACACATTAG<br>TGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAATAAAA<br>TAAAATAAAATAAAAATAAATGAAAAAAAAAAAAACAAAAAACAAAAAAAGAAAAAAAAAAAAA</font><font color="green"><u>AAAGACCCAAACAGG</u></font>ccaataactattagttattat<br>ctctactgaaaaagtgggacttcctgttatgaataagggaactaactgaattccctgctacctaattaccttctgtagctatacttactgacaaaaacac<br>cattaatttttttagataccaattttttttaatactatgaatcttaagggaaaatggcttcacctcaaaaatactctgttacttgcttggaagatagacg<br>actttaagctgatgctgataaacttgtggcttccaaagttttccttactaattctaaacccaaaaggtgcctggcagtctctgctatgtctgtttcaagt<br>aaccctagctctatatcaggagacattttccttataaacagaaacatggtaaatcttaagttcc	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	60	5680	201	NA	promoter:C4orf35:NM:033122	
0	chr5	155421520	155427555	2000184	0	-	L1HS450; RIP_L1_chr5_155_01	GTGAAGACTGTTGGTCAGTTACTTGT	GTCATTGAGATTGGCAGGTAAAAG	LINE	L1	L1HS	catattctcactcataagtgggaattgaacaatgagaacacatggacacaggaaggggaacatcacactctggggactgttgtggggtggggaaaggggg<br>gagggatagctttaggagacatacctgatgctaaatgacgagttaatgggtgcagcacaccagcatggcacatgtatacatatgtaactaacctgcacat<br>tgtgcacatgtaccctaaaacttaaaataaaataaaataacataaaataaaataaaataaaaataaaaatataaaattctagggacatcacaggccactg<br>caggtagagaggaaggttgaacagtgaagactgttggtcagttacttgtttcaacaaaatttctaaagaaagaattttgccaatt<font color="green"><u>AAAAAAAAAAAAGTG<br></u></font><font color="red">GGGGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGT<br>ACCGGGTTCATCTCTCTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGAGCGAGGCATTGCCTCACCTG<br>GGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGATGGTCGCACCTGGAAAATAGGGTCACTCCCACCCGAATATTGCGCTTTT<br>CAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTC<br>TGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGG<br>TGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGA<br>CTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACAGACTGCCTCCTCAAGTGGG<br>TCCCTGACTCCTGACCCCGGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCT<br>GAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAA<br>AACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACA<br>GAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCA<br>AAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTGTAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGC<br>TCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCAATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGA<br>GAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTAC<br>CTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGAT<br>TCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATG<br>TTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGT<br>GGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTT<br>TATAGACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAG<br>CCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGAT<br>CAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATC<br>AGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAA<br>AAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCGACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAA<br>TTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGA<br>CTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCA<br>GCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTCTTCTCAGCACCACACCACACCTATTCCAAAA<br>TTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACT<br>CAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATA<br>AAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATG<br>CCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAG<br>GCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGATTTTTTGAAAGGATC<br>AACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATC<br>CCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACAC<br>TCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGT<br>CCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACATGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAA<br>TCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAA<br>CATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATG<br>CAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAG<br>CCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACC<br>CACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCGCAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATA<br>GTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACA<br>TGATTGTATATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAA<br>ATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGA<br>ATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCAT<br>GCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAACGCCATCCCCATAAAGCTACCAATGACTTTCTT<br>CACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATC<br>ACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGC<br>CCTCAGAAATAATGCCACATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTG<br>GGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAA<br>CCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAA<br>CAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGA<br>GAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAA<br>AAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAA<br>TGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAAT<br>AGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCAATTCCTGAGGGATCTAGAACTAGAAATACCATTT<br>GACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAA<br>TAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAA<br>TGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCA<br>CTCATAGGTGGGAACTGAACAATGAGATCACATGCACACAGGAAGGGGAACATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGC<br>ATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATG<br>TACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAA</font><font color="green"><u>AAAAAAAAAAAAGTG</u></font>aaaactcctggaattatcaccaaatatcttttacctgccaatctcaatg<br>actgaattattcaaagacatatattaatgtaacttggaggaacactccaacacatgtccccaaactgtcagttcatctatgaaactgtccagacaaccca<br>ttagatatttgttgcctttgggtcttactttttctttacattgagaataaatttctcctgttcctagttttctatttcttcctaattaacaacaattgtg<br>cattgtccttccactaacacctggcatagatcaaatttctactgtgattcctacatttaacacttcccctgaaaagagctttatttccattgaggggtcc<br>aattcattaacattcatgcagtgggtttgtttttaa	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	60	6179	128	NA	intergenic	
0	chr14	46265414	46266723	2000185	0	-	L1HS512; RIP_L1_chr14_046_01	AAAGAGACAATCCACAGCATAGTTG	GATTTATTCCTTCATGGAGATGTGC	LINE	L1	L1HS	tgttaatattttttaaaaaagaaatcacttatttgtctaacaaggggaattaagttaactttattataatatatgattcattcataaaataaactactat<br>gcagttatcaaataatattattgacaaatatttcatatcatgaggacatcaggaattttataaaatagtaagtatattacgattctctatttctaaagaa<br>tgtatataatcaaatgtatacttggatgtgcatataaagtattgatggatatttatcaaaatgtaaaggatggttctccctgaagtaagatattactgaa<br>gtgttagtgtaacttttattttttctttatattttttcaaattttcagagtaaacatattactgtcaggaagggaaaaatgttttaag<font color="green"><u>AAAGAAAATCTT<br></u></font><font color="red">GACTATGTATCTGGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTT<br>CCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCAT<br>TGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATGGGATCTAATTAAACTAAAG<br>AGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATAT<br>CCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGA<br>CATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTT<br>AGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTC<br>AACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTA<br>TAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAGAGACTTGGAACCAACCCAAATGTCCAACAATGATA<br>GACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGG<br>AAACCATCTTTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAG<br>GAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGT<br>GCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAGAA<br>AAAAAAAAAA</font><font color="green"><u>AAAGAAAATCTT</u></font>aaaatcacaaacatggatacaatatatgtaatacaacattttttctaaatggttattttgaattaattttgcttttag<br>aattttttctcagcacatctccatgaaggaataaatcataaaatgaatgaatatgctaaatcatgagagcagaatcattaattaagaggtagtgtgattt<br>aagagatggaaatggaaaagtggcaccagttatgctttttataaccataaatgataagtaatatatgctttctaagtgtttgatgtttgttttcaaagaa<br>cattggcatggtgtttgaattcaatattcagtcgttcacttttagtgagattatgccctttccagatgccttgtaatttatttcaaaaaagtatagaaca<br>gttaatgttt	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	61	2071	722	NA	intergenic	
0	chr18	70839486	70840318	2000186	0	+	L1HS558; RIP_L1_chr18_070_01	TGCTTTCTTTCTTTCACATAGATCA	GCAGACACGAATCACAGTTTGTAT	LINE	L1	L1HS	agctgcacagttaagaatcctttttttcatgggatgatgtttcttgtcaataagatttaattccctgaggcagagagagttttaattcctttttctttag<br>tttactcagcttagctcagtgaagggcaaagcaaaaacaccaagaaaaattactttttgaattaaatgaatgtcttctttgcctagccccatccttccca<br>ggctgtctgtcagctcttgcctccttcagtgtgggaaggtcccctgtcctatcactacaggcctttgatgggtcaaaatacctgtctgtgttctcctcta<br>atccacttttccatataatgctttctttctttcacatagatcatacttagatcatcacttctatgttgatgtacatatttttttcaattaacgaagg<font color="green"><u>ACA<br></u></font><font color="red">TGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCAC<br>TATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACAC<br>TGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCAT<br>TACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAA<br>CCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCC<br>TTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATT<br>GAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCT<br>AATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGA<br>GTATAATAAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>ACA</u></font>aaggtaaaacttaagtattttgtttgaaagttgtaggtttatttatacaaactgtgattcgtgtctgct<br>ttcccctggcttaaccctttggacatcttttcattgctaccatagccacatggcagaacatatttctgagaaagaaaataatttagagtctactccagga<br>atataggaatattgctcacaaatgtgccagacttttaatttcttatttttgaatcattgtattgaagaataacagtgaactcaaatctcataaagattgc<br>tgatagtgtaaaagagaatgattcttatactttgatgcccacaaaaagaataaatttttatgaatatgagtcactttaggaaatacgtcttgattattct<br>tccattattgaagaaattggcctgatca	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	61	983	128	NA	intron:ZNF407:NM:017757:7/8	
0	chr6	13611043	13611044	2000187	0	+	L1HS2; RIP_L1_chr6_013_01;AC208509;AC217408	ACCAAATATCTGGACACTTTCTGG;NA;NA	GAAGTCAGCAGTGGTTAATTTTACA;NA;NA	LINE	L1	L1HS	caccactgtactccagcctgggcaacagagcaagactctgcctcaaaaaaagaacaacttaaaaaaaaaagatactatatttaagccaatactataccag<br>actaaaagaatataccacagttatatgtgtcaatatgcattggtctcagaaacataacattgattaaaataaaaatgtgattacttttatattgatgtta<br>aaaccaatgcaaacaattctgcattttaatgaatacatatgtgtgtgtgtgcatgtgtgtgtgtatctgtttaaaacaaattggaagaactcataggact<br>gtgtgctaaaactgtatgtaaattaaacttcaatacatggcttaaaaaatagactgggaagtcagcagtggttaattttacatgtc<font color="green"><u>AAATGTAAAAATGA<br></u></font><font color="red">GAGTCGAGGAGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCAT<br>CTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCC<br>TCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTG<br>CGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCAC<br>AGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCG<br>AACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCT<br>CTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACAGGCAGACTGCCTCCTCAAGT<br>GGGTCCCTGACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCA<br>GCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGA<br>TAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCA<br>ACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAG<br>GCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGACGGAGCTGAAAACCAA<br>GGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAG<br>TGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTG<br>TACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCA<br>GATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAA<br>ATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAG<br>AGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAAGTAAGCTTCATAAGTGAAGGAGAAATAAAATA<br>CTTTATAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTAC<br>CAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATTGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAG<br>GATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCC<br>ATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAA<br>AAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGAT<br>CAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTT<br>AGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAAC<br>TCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCA<br>AAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGA<br>ACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAA<br>ATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAA<br>ATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAG<br>AAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGG<br>ATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACGCAATAAAAAATGATAAAGGGGATATCACCACCG<br>ATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCGCTACGCAAATGAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATA<br>CACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAG<br>AGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGG<br>GAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGAT<br>GAACATTGATGCAAAAATCCTCAATAAGATAATGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGG<br>ATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAA<br>AAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAA<br>ACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAAC<br>ATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACG<br>ACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACA<br>AAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTA<br>GGAATCCAACTTACAAGGGATGTGAAGGACCTCATCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTC<br>CATGCTCATGGGTAGGAAGAATCAATATCATGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTT<br>CTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGC<br>ATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAG<br>AGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTG<br>CTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTT<br>AAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGG<br>CAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATG<br>GGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATC<br>AAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAG<br>AAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGA<br>AATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAAGGATCTAGAACTAGAAATACCA<br>TTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCA<br>CAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAA<br>AAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCACATATTC<br>TCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGAT<br>AGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCAC<br>ATGTACCCTAAAACTTAGAGTATAATTAAAAAAAAAAAAAAAA</font><font color="green"><u>AAATGTAAAAATGA</u></font>ctgggccagaaagtgtccagatatttggtcaaacattattgtg<br>gatgtttgaataatagaataacatttaatgagatgaacatttgaatccatagactgaattcagcagattgccttcaccctggtagaggtggaggttggcc<br>tcatccagtctcttgaaggcctaactagaacaaaaaagccagctctcccctgagtaaaagagaatttctcctccctgactgccttcaaactgggacattg<br>gcttttttcctgcctttggactcaaactgaaacatcacctctttctgggtgtagagcctgccaccttcacattggaactataccatcagctctccttggt<br>ctccagcttgccaactcaccctgcagttcctgggactttccca	Other;OTHER;OTHER	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R,Wilson RK, Eichler EE. A human genome structural variation sequencing resource reveals insights intomutational mechanisms. Cell. 2010 Nov 24;143(5):837-47.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=21111241">PMID:21111241</a>.</LI><LI>Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R,Wilson RK, Eichler EE. A human genome structural variation sequencing resource reveals insights intomutational mechanisms. Cell. 2010 Nov 24;143(5):837-47.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=21111241">PMID:21111241</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR;E: fosmid-end sequencing;E: fosmid-end sequencing	NA;NA;NA	60;NA;NA	6131;NA;NA	74;NA;NA	NA;NA;NA	intergenic;intergenic;intergenic	
0	chr17	26683724	26684063	2000188	0	-	L1HS14; RIP_L1_chr17_026_01	AAGTGGATTAACAGTAACATACAGA	CCAAGCTGATAACTGATTATCTCA	LINE	L1	L1HS	aataaacattttaacattaattctttaggataaatgctaaaaagcagaattatgaggccaaaaggtatgaatagtcttaaggtcttgttatccacttcca<br>aatgcctttctagaaaaattgcctctactcacaattccacagaccaccaggaatggatcttaaaaaaaaaatctttgccaagctgataactgattatctc<br>actattctttcaattggcttttattagtgaatttcttaaaatataaatattctttttgagatgggggcctcactatgttgtccaggctggtctcaaactc<br>ctgggcttagcgatcctcctgagcaggtgggattacaggcatgtgccatggtgcctggcttttttctttttttgtacaaatattctttttt<font color="green"><u>AAAAAACAT<br></u></font><font color="red">AAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATA<br>TTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGG<br>GATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTG<br>CACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAA</font><font color="green"><u>AAAAAACAT</u></font>gatctgtatgttactgttaatccactttttattaatcggtcagcaccctt<br>catgattaaggattttattcattcattcattcatttattcattcatttatttattttgagacagagtctccctctgttgcccaggctggagtgcagtgga<br>gtgatctcggctcactgcaacctctgcctcctgggttcaagcaattctcctgcctcagcctcctgagtagctgggactacaggcatgtaccaccgagccc<br>ggctaatttttgtatttttagtagagaggggatttcaccatattggccaggctggtctcgaactccttaccttgtgatccacccacctcagcctcccaaa<br>gtgctgggattacaggcgtgagccaccgcgtctggccgatt	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	55	601	251	NA	intron:NF1:NM:001042492:39/58	
0	chr21	25747018	25747269	2000189	0	+	238468; L1HS132; L1HS78; L1HS16; RIP_L1_chr21_025_01	CCCTCACAGAGTGCTTGGTAA	GGGAAGGTAGGAAAACAGATT	LINE	L1	L1HS	ttattaatgagatattttatgttttatgcatgctatgtttctgaaatcttgttagtattttgtgcttatagcacttatcagcttggactggccacatctc<br>aagtgctggataatcacatgtggctagtggccatcatattgggcagtgaaggtctagagcagacaggcaaggtgaagcggaaagaagaacaaaaatgaag<br>acagaccagggtttaaactccaccctgtgactgaagctcagtgaatgctagctataatttctatgctcctaactggagaaccttcctgagccttggtttt<br>ctcatacataaatgagggataatagtacctcccttaaagagctgttataaagattcattggaaagcccctcacagagtgcttggt<font color="green"><u>AAAGTGTAGATGCTC<br></u></font><font color="red">TATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGA<br>GGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATG<br>TGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AAAGTGTAGATGCTC</u></font>aataaatatcaggcacttttcttttcctcttag<br>tcttcatatctgttttcctaccttccctcttcaaggaaaaagtctgcttattttacctttgtttccccagcctggcccactggtaggtgctcagaaagtc<br>gttgtagaattaatgagtggtcttaagttcctatagtggaatatatccaattgctaatttagattttcctttaataaatcatcctttaaaacactttggc<br>aagacttgcaagttgtggagctgttgacattgtagctggtggtccagtggagagatggtccaaggtctagtttggggattggagggaagagcctgttaag<br>ggaaaggaaatgtggcagcatcacaaacaaaacaaaccagatgagatgaacc	UCSC	<UL><LI>Bennett EA, Coleman LE, Tsui C, Pittard WS, Devine SE. Natural genetic variation caused by transposable elements in humans. Genetics. 2004 Oct;168(2):933-51.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15514065">PMID:15514065</a>.</LI><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	C:Reference; E:Insertion-specific detection:PCR	NA	56	753	486	NA	intergenic	
0	chr2	53479277	53481503	2000190	0	+	L1HS20; RIP_L1_chr2_053_01	AATGGAAGAGCTCTCAAATTCCTTA	GCAACCATTCAAAAATTTACAACAG	LINE	L1	L1HS	ctaaagggaccgagggacctctatctggtactttattaaaaagtcattaccatttccttgcacaattataagaaaaataaaatgcgaagagttagggaag<br>gtgttaaatagagaatttttataaaacttctcttaaaatctttcaacattttttaatgaagccatttagccattaaaaaaaagtgatataaaaaagttgt<br>atccatggttagagttaagacggttttattaaattcctgttcaagacattttaatggtgatctctataaattcttgatggacaccatcaatgagaaactg<br>ttcttactgttcttactagtaggtgatttaaaataaataaataaataaataaaacatttttatgcaaccattcaaaaatttacaacagtt<font color="green"><u>GAAATTATAT<br></u></font><font color="red">CTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAAT<br>CCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTAT<br>ATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGG<br>CTTAGGATTGACTTGGCGATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGG<br>GGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGT<br>GTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAA<br>GCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTG<br>AGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTT<br>GACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGA<br>GGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTA<br>TTTTGAAATACGTCCCATCAATACCTAATTTAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACC<br>TAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAAT<br>TAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAA<br>GGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCT<br>CAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCT<br>CACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGT<br>AAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACC<br>CAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACATATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCC<br>AACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGG<br>ATGAAATTGGAAACCATCATTCTCAGTAAACTATCACAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCAC<br>ATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACA<br>CATTAGTGGGTGCAGTGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAA<br>AAAAAAGAAAGAAAAAAAAAAAAAAAA</font><font color="green"><u>GAAATTATAT</u></font>ttaaggaatttgagagctcttccattgacaaatataactattcaattttttgtaataacatga<br>agacattttaaatccaattgaaattttcatatcaagtatttcaaaataatgaggaagccttgatttttagaatacatatattttagaacaaaaccctata<br>gctagcctggacataagtaaaacggcccatccatggatggacagaagtatctgatatttgacaagaaagagcttcttgattcccatctgggggtgcagtc<br>acaaggaacctccatctagcctgccagccccaccaccatcccactggcatcaccttaacctacacccttggctggtgctcttaagacacctagaacatga<br>gatcattcagtagtgcccagacttctt	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	61	2302	62	NA	intergenic	
0	chr7	144694162	144694317	2000191	0	+	L1HS32; RIP_L1_chr7_144_01	TCTCTAATCCAGCCTTTCAATTC	TGTTTCTTTTCCTGTGTGTTTCC	LINE	L1	L1HS	ttattatcatttcaggcctagttttaatcacaaatacttgaggacaaattttgtatctagaagtgtagcttttcctttgttcttcatttccagaattgtc<br>ttggctacatttagattcttgttattacacaggatcttttgaattcatttttctaaatacatgaaaagtactattgagattttcctttaattcattaaca<br>ggtaaaatttttatcatgcttttgagtattcccattcactaacttattatatttcatcatttattcatgttcctttaatgtccttcaatacaattttgta<br>tttctttcatatagcccttgcacatttgttgctgctgtcattgaaattatttcctgtttcttttcctgtgtgtttccagttagagtaagtgtt<font color="green"><u>AAGATAC<br></u></font><font color="red">GGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTA<br>ACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAA</font><font color="green"><u>AAGATAC</u></font>attcctaagtgagatttgcaggaaggaattaaagtat<br>cagcctttttgtaacatacacctgttgcattttacctgctacctcacataatggggcatttgcctgtcctgcaaatgcgccacttaccctggatcttttt<br>gcagcattttcgccacctgatccagaggtgcattcagttccgtcctgatggacaccggcttcttctgcaaagaagcttctattttcctggctttgaattg<br>aaaggctggattagagatttcaaagttagtttctatatctaaaaattaataatgattttatcttaatactctcatgtaaaatattactcatttataatta<br>cataatttattatgcagttaatgtggccactaaagtaaatattataaatgatctaa	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	57	463	280	NA	intergenic	
0	chr5	8802529	8802530	2000192	0	+	L1HS34; RIP_L1_chr5_008_01	ATGTCTGTCTTGACATTCCTAAGC	AATATGTAGAATGGCACAGGCTTC	LINE	L1	L1HS	tatataaaaattcatcatgacaactttataaaatgcatctcgactaaacagctaacattctgaattctgctttatgcagtgtgtttgggtcatacataga<br>ggccatgaaaacactgagcttggcttaaatacactggtttctcttatctacgtcaccatcagtttaaagtaaaatttggaagaaaaaatatattgaagaa<br>taatataagtaggcactcaaacaatgtgccacacacttccatcttaaaacaaagttaatatgtagaatggcacaggcttcagacattttcatattatctg<br>gtaacacttttctttaactacagcatttaaaatatataggcaggttaatataagaaatatcattccaaagagtaaattttctcttt<font color="green"><u>AAAATTTTTTAATG<br></u></font><font color="red">TGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGT<br>GAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAG<br>CATGGAATGTTCTTCCATTTGTTTGTCTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGA<br>TTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGA<br>TTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATC<br>ATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACA<br>CTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCGGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGT<br>GGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAG<br>GCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTT<br>GCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAAT<br>GTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGG<br>ATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTG<br>GACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCGATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAG<br>AGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTGTTTATTGCGGCACTATTCACAATAGCAAAGA<br>CTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTT<br>CATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGT<br>GGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGA<br>TATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAA<br>ACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAGTTTTAAATTTAAAAAAAAAAAAAAAAA</font><font color="green"><u>AAAATTTTTTAATG</u></font>aatccat<br>ttcaaaaattttaaatcaattatctttttcattacataaactcaggcatgtatgaacatattttttagtggaagtagtcaaataattttgatttgaagcc<br>ttttaaggcttaggaatgtcaagacagacatcaaatatttaacagatccatgatgcaaaagcaatttcagaggcttttgaaatagacttttggccttatg<br>ctgaatcatcccatactgaggtgctctttgagttattacatttgcccttcatgtttgtgtttttcacctgctattcgctggtatttcttgacaccacatg<br>cgttcctccctagaggattcttttcagtgttgtgtggtgcctgccctggtttgagcaggtgcatagccaaactcaacat	Other	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	58	2177	284	NA	intergenic	
0	chr7	107616500	107616501	2000193	0	+	L1HS43;1104685588367; RIP_L1_chr7_107_01	TTTATTGCACCTCCTGGTAAAGTAG;TAGAAGACTGGGCCTGGATG 	AGAGCACCATTAAACAACACAAGAT;TACCGCAGGAAGACAATTCC	LINE	L1	L1HS	tgcagatataatgaaattatgcttaataatgtattattaattttatcttatttatatcctcatctaaaatataagctccataaccacagagatttttgac<br>tattttgttttagaacaatgtctggcacacagtaggcactcaaaaatatctgttgaatgaatgagtaaatgaatgaaagagtagaaatgccttgaaatct<br>aatggtattattttaatataggaaaaaagagtctccaagccatctaaccagctaactctggctaatgtacccaatgagctagaagactgggcctggatga<br>atttgtgttctgatcaaggacattgaacactcaagtagggaaaagagcaccattaaacaacacaagatagaggaggggcttttgt<font color="green"><u>TAAATTTTAGTGGAA<br></u></font><font color="red">TAGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGT<br>ACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTG<br>GGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCAAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTT<br>CAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTC<br>TGAGATCAAACTGCAAGGCGGCAGCGAGGCTGGGGGAGGGGCGCCCACCATTGCCCAGGCTAGCTTAGGTAAACAAAGCAGCCTGGAAGCTCGAACTGGG<br>TGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGA<br>TTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCC<br>TGACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACATCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGG<br>GTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACC<br>ACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACACAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAAC<br>AAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGA<br>AGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGA<br>GAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAG<br>GGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGA<br>AAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAG<br>GAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCCGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAA<br>GGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGG<br>GCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATA<br>GACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGC<br>TGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCGAA<br>TTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTG<br>TGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGG<br>CAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCA<br>ACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCC<br>CACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTC<br>TGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGA<br>CCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGG<br>ATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGA<br>TGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTA<br>CAAGAGAAAGCAGGAAGGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAA<br>GAAATAACTAAAATCAGAGCAGAACTGAAAGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACA<br>AAATTGATAGACTGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCAC<br>AGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATAAATTCCTCGACACATACACTCTC<br>CCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAG<br>GACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCT<br>CCCTAACTCATTTTAGGAGGCCAGCATCATTCTGATACCAAAGCTGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATT<br>GATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAG<br>GCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTT<br>TGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATACATTAGGTATTGATGGGATGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACA<br>GCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGT<br>TGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGAT<br>TGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCA<br>CAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAGGAGAATAAAATACCTAGGAATCC<br>AACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAATGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTC<br>ATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACA<br>GAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACAC<br>TACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTC<br>AGAAATAACACCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAA<br>AACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACCTA<br>AAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAA<br>AGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAA<br>ATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAACAAACAACCCCATCAAAAAGTG<br>GGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAA<br>ATCAAAACCACTATGAGACATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAA<br>CACTTTTACACTGTTGGTGGGACTGTAAACTAATTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCC<br>AGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACATGTATGTTTATTGCGGCACTATTCACAATAGCA<br>AAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATG<br>AGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCAT<br>AGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGG<br>GAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCC<br>TAATACTTAGAGTATAATAAAAAAAATAAAAATAAAATAAATAAATAAATAAA</font><font color="green"><u>TAAATTTTAGTGGAA</u></font>atattctactttaccaggaggtgcaataaatc<br>aacacacctatcatttcagaatcatcttaggtagtcatcagaaaggaattgtcttcctgcggtatatgcctgaaggtaataatgtatttcaggcatgtga<br>cctgattgtgtctgcctcttaagtatctctttggttttacaattcaacttcgaagcttacctatagtctaattttattatgctcttctagtatccttatg<br>acattgtccttccttatcttatttcctaggccctaggcttatgtcaccaacgtgagaagctcacattgttgaatgggcaactttgtagcagggactaatg<br>gaaagaaagagacctaggttggaagttaaggtagaacctgttatctacgccca	Other;Venter	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Xing J, Zhang Y, Han K, Salem AH, Sen SK, Huff CD, Zhou Q, Kirkness EF, Levy S,Batzer MA, Jorde LB. Mobile elements create structural variation: analysis of a complete humangenome. Genome Res. 2009 Sep;19(9):1516-26. Epub 2009 May 13.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=19439515">PMID:19439515</a>.</LI><LI>The diploid genome sequence of an individual human. Comment in:    PLoS Biol. 2007 Oct;5(10):e266. PLoS Biol. 2007 Sep 4;5(10):e254.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=17803354">PMID:17803354</a>.</LI></UL>	C:Comparative personal genomics:Venter; E:Insertion-specific detection:PCR	NA;NA	58;55	6157;6284	89;217	NA;NA	intron:NRCAM:NM:001037132:20/33	
0	chrX	143234669	143237641	2000194	0	+	L1HS70; AL049588; AF417125; RIP_L1_chrX_143_01	GTTCATTTGAGTGAGGGTACTGTCT	TAAGTCCCAAAAATTGCATCC	LINE	L1	L1HS	gagttctctagtcaatagctttttttttttcctttttcctttttcctttttcttctttttttttttttttttttttttttagcagagagtacagttcttc<br>ttagaaaattattagatcagattagggagatttcaaaatatttatcaccttttaatttctttaaagaaattctaatcagactgaatatcaccaagatcat<br>aggcaagaaggctttgaattaatatgttctacttgcacaggaaaatatatcagttcatttgagtgagggtactgtctcagaccccatgctctattgggca<br>atccacccttattgacagagttgccagatttggcaagtaaacatacaggatgcccagaaacatttaaatttcagataaacaacaaataag<font color="green"><u>AAGAAAAAAA<br></u></font><font color="red">GAGACAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCT<br>CTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACCCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGA<br>CCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACA<br>AGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACC<br>AAAGCCTGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATC<br>CAGCAGCACATCAAAAAGCTTATCCAACATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGC<br>ATATAAACAGAGCCAAAGACAAAAACCACATGATATTCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAA<br>TAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGACAATATCATACTGAATGGGCAAAAACTGGAAGCATTC<br>CCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAA<br>TAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGATGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCT<br>CCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGC<br>CAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACT<br>ACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACT<br>GCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAA<br>AAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACCACAAGGCTACAGTAACCA<br>AAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGA<br>CAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCC<br>TTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCA<br>TTCAGGACATAGGCGTGGGCAAGGACTTCACGTCCAAAACACCAAAAGCAATGGCAACCAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAG<br>CTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCC<br>AGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACA<br>TTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAG<br>AATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAA<br>CCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATA<br>AATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGA<br>CTGGATTGAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAA<br>ACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGA<br>AGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCAGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGC<br>AGCACACCAGCATGGCACATGTATACATATGTAACTAACATGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAATCATTTATTA<br>AAACAAAGTTTTTATATTTTTATAATAGTGTTTCACTTGATAAATATTTTTGAATAAATGAATGAGGAAATTA</font><font color="green"><u>AAGAAAAAAA</u></font>aaaaagaagatatgcac<br>tatttggatgcaatttttgggacttaatatgtggtatacacttttattttaaaatatttatttacttgaaattcaactttaacttggtgtcctatatttt<br>atctggcaattctattgctataagatggggcatctgttaaagaattgtatcttagctcatgagaggctgccaagccacctgaattattccttacatcact<br>cccctgaggcacacaatccttattcaccatgggctctacaataagcagtttattcaatacacatctacataaactgatagatcacttactaagtactggg<br>cactggggtcacacggtaaataaggcccactccccaccctggagaagctcactatccagggaaggaggtaaac	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Boissinot S, Chevret P, Furano AV. L1 (LINE-1) retrotransposon evolution and amplification in recent human history. Mol Biol Evol. 2000 Jun;17(6):915-28.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=10833198">PMID:10833198</a>.</LI><LI>Ovchinnikov I, Troxel AB, Swergold GD. Genomic characterization of recent human LINE-1 insertions: evidence supportingrandom insertion. Genome Res. 2001 Dec;11(12):2050-8.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=11731495">PMID:11731495</a>.</LI></UL>	E:Library screening:TE-specific hybridization; E:Insertion-specific detection:PCR	NA	59	3174	175	NA	intergenic	
0	chr6	32485879	32486631	2000195	0	+	L1HS153; RIP_L1_chr6_032_02	CCAATTCACTTTGTCTCCTAGAAAT	AGTTCACGAAGTTGAAAGCTTATGT	LINE	L1	L1HS	ttgtcaagatatatgatctaatatgcaaatgtatcatcaaattctcaaaaacccatgtttaatttaatttaattttctggataaagtttaagtgttaaat<br>tgtaataataagtggtagcttatgtttaggcattagatgatgaacaattctgaatttcaaggcctatcctgcactgctaaaactcatatcaaagaaaatt<br>gcaaattactacgtatcatgggtcattagaacttttttcagtaaaagcctcaaatgttgctcctcaaaatgccaagcagccatagtaactgactggtaag<br>aataaattaacttagttcaggaagttgaaagcttatgtatcttagttcacgaagttgaaagcttatgtatctatgtagacatt<font color="green"><u>AAAAACAGCTATAGTTT<br></u></font><font color="red">GTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTT<br>GCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGG<br>TGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCT<br>TTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCAT<br>AAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATA<br>TTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAAG<br>GATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTG<br>CACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAATTAAAAAAAA</font><font color="green"><u>AAAAACAGCTATAGTTT</u></font>atcatatgttaaaacaatacatttttatagaga<br>aagctaaaataagatttctaggagacaaagtgaattgggtttttgtgtgtgtgtgtgtgaccttggacatctttctttacttttttgagcctgtattttc<br>tctgctgtgtggtggagacaatcatcctaatgttttccaagctgtgtcatgaccatgtgacataagaagacgtcaaggctcagggacacatgccccacat<br>catccatgacaaatgaaaatgtgatcctggttttcttgtttttaatttcgtgcttcttcctcactcagcctgcttcacaagaacactgtgagggtcaaat<br>gggctacaatcgcactttgaagactgcgcagtgggatataaatgtaagtg	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	60	931	169	NA	intergenic	
0	chr9	12546850	12549646	2000196	0	-	L1HS163; RIP_L1_chr9_012_01	GGGACAGGGGTTAAGATTTTATTTT	AGTTCTCAACTGTAAAGGCAGTGTC	LINE	L1	L1HS	tacatgctctttcagagcaactgtaaaaagagaaagtagcaggaggcaaagttcctttcctggagtacaaaatggtaatgcacataatcatgcccttccc<br>acttatgttactctatgggatattcagagactggggagctgcagcacctgccaacccttctgcctctgggttctagcctgaactgtgtggtacataaggc<br>cattgcatcaaccccttactcatcagtgttctccacattttcactcagaacatcaattggcataaatagcctgaggactctgaagaactctcttcctttt<br>gggcacttggagactgagttcattaacttctccccaggggaaagggcagttctcaactgtaaaggcagtgtctaattcgaggtt<font color="green"><u>GAAAAGTATTGTATTG<br></u></font><font color="red">ACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAG<br>GGCATCCCTGTCTTGTGCCGGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTAT<br>TTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATC<br>ATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGAT<br>CATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATT<br>CTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGTATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAAT<br>AGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGA<br>TTATTGCCACAATTTCAGAGCCTGTTATTGGTCGATTCAGAGATTCAACTTCTTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAAC<br>CCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACA<br>CCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGT<br>GAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATC<br>AATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTA<br>CTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACT<br>ATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCACAT<br>ATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATAT<br>GTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCT<br>AGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAA<br>CGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACT<br>CATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAA<br>CAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATG<br>AGATATCATCTCACACCAGTTAGAATGGCAGTCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTT<br>GGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACT<br>GGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCAGCACTATTCACAATAGCAAAGACTTGGAACCAA<br>CCCAAATGCCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTG<br>TAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAAC<br>AATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATG<br>CTAGATGACACATTAGTGGGTGCAGTGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTAT<br>AATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATTGTAAAAAAAAAAATTATAAATAAAACAAAGAAGAATAAAAAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>GAA<br>AAGTATTGTATTG</u></font>taaactaaaaataaaatcttaacccctgtcccgcccgctaccacgtgctgtacagaccccaaagggcccccagaaaaaaaaacttaa<br>aactaagttccttgcggccaaagggaccccacaaaaaaacaaaactgagttggtgacaggatgggaggtcagatatgctttgttatatccccccctttca<br>tggtttacccacaactgaccagcattaatgttaacatagagatcataagaccaacagaacagactctttgttgcaataagatgcccaattacaaacaaga<br>cctaaggccatgccaggcaagggtctggcatgggtacaattaaagaataaactatgctgtaactgtgctacaaagcttttctttttctctaggctaa	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	60	2898	85	NA	intergenic	
0	chr6	70776961	70783010	2000197	0	+	L1HS169; RIP_L1_chr6_070_01	TATTGAGGTGTAACCAGCATACAAT	CCACACGAAAGATATATGAATTGC	LINE	L1	L1HS	ataggtaatagaaataaatgtaaaaaccaaaactgtaaattttttagaagaaaatacagaataaatactttgtgactttaggttaggcataggtttttaa<br>ctatgacactaaaaagtcaatcaatgaaagaaatagttaaaaatatttcttctttgaaagacactgccaggagaataaaaagacaaagcacaccatggga<br>gaaatattttcaaattacatatatgataaaatgacttttatccagaatatataaatagctctaaacaaacaatccaatttttaaaatgagtatgattgta<br>atagcactccacacgaaagatatatgaattgcaaataaactcatgaaaagttgttcaacatgattagtcattagg<font color="green"><u>AAAATCAAAACAAAACAAAGCAAAC<br></u></font><font color="red">GAGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTA<br>CCGGGTTCATCTCACTAGGGAGTGCCAGAGAGTTGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCGGAAGCAGGGCGAGGCATTGCCTCACCTGG<br>GAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATAGGGTCACTCCCACCCGAATATTGCGCTTTTC<br>AGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACACCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCT<br>GAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCAGGAAGCTCAAACTGGGT<br>GGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGAC<br>TTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCT<br>GACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGG<br>TCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCA<br>CAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACA<br>AAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAA<br>GTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAG<br>AACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGG<br>GAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTATGTCTGATTGGTGTACCTGAA<br>AGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGG<br>AAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAG<br>GGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGG<br>CCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCACAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAG<br>ACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCT<br>GCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAAT<br>TCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGT<br>GCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGC<br>AGGGGTTGCAATCCTAGTCTCTGACAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAA<br>CAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTCACCTACAAAGAGACTTAGACTCCC<br>ACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCT<br>GCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGAC<br>CACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGA<br>TTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGAT<br>GTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTAC<br>AAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAG<br>AAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAA<br>AATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACAAAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACA<br>GAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACACAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCC<br>CAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATCGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGG<br>ACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTC<br>CCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTG<br>ATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGG<br>CTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTT<br>GACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGATGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAG<br>CCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTT<br>GGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATT<br>GTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCAC<br>AAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCA<br>ACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAATAAATGGAAGAACATTCCATGCTCA<br>TGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAG<br>AATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACT<br>ACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACAAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCA<br>GAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAA<br>ACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAA<br>AACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAA<br>GACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAA<br>TTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTG<br>GGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAA<br>ATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAA<br>ACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACC<br>CAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGC<br>AAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGAT<br>GAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCA<br>TAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTG<br>GGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACAAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACC<br>CTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAACACATGAAAAAAA</font><font color="green"><u>AAAAACAAAACAAAACAAAGCAAAC</u></font>atggaaatgtttgttattttaattg<br>ttatgatggtttcatggctgtttgcatgtgtcaaaactcatcaaatttgtgtacgttaaatatgtgaaacttattgtatgctggttacacctcaataaag<br>ctgttaaatttttttaaatttaaaaatattatttcaagaataaaataaccaaaccatattctgggagcaagtatttgcaaattatatatctgataaatga<br>cttgtatcaataatacataaagaacttttacaactcacaaataagaaggcaaactaaaaatggaaaaaagatttaaatagatgattcttcaaagaagata<br>tgtgaatgtctaacaagcagaggaaatgatcattaatcattaagaaaatg	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	60	6289	214	NA	intron:COL19A1:NM:001858:11/51	
0	chr9	10126524	10127713	2000198	0	+	L1HS172; RIP_L1_chr9_010_01	CTAAGATCAGTCACAGGCTTAATGA	CAGGTGCAAGTGGTTTAATTTTC	LINE	L1	L1HS	caaaaaggacagagcaagacattacataacaataaaatattcaattcaacaagaacacctaattatcctaaatacatatgcaatgcaacattggcactca<br>gattcataaaacaagtacttcttggactgcagtaagatttagacagctgcacaagaatagtgggggacttcaacgttccactaacagtgctagatagatc<br>atcaaggcagaaaactaacagaaattttggacttaaactcgacacttgacgaattgttcctaatagatatttacagaatactcaacctaacaaccgcaaa<br>gtacacagtcttttaatctgcactcagaacatactctaagatcagtcacaggcttaatgataaagcaagtctaaataaattcc<font color="green"><u>AAAAAATAGAAATTATA<br></u></font><font color="red">CCAAACAAACTTTTCAGACCAAAGTATGATAAAAATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATT<br>CAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCT<br>TCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAG<br>AATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGTGAAGGACATGAACAGACACTTCTCAAAAGAAGACATT<br>TATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAA<br>TGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACC<br>ATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGACATCCCATTACTGGGTATATACCCAAATGAGTATAAA<br>TCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACT<br>GGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAAC<br>CATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAG<br>GGGAATATCACACTCTGGGGACTGTGGTGGCGTCGGGGGAGGGGGGAGGGATAGCACTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAG<br>CGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAA</font><font color="green"><u>AAAAAAAAGA<br>AATCATA</u></font>accaagaatatctcaaactgcacaactacatgaaaattaaaccacttgcacctgaatggctttttggtaaacaacaaaattaagggagaaatt<br>gtaaaactctttgaaattaataaaaacagaaacacaacatatcaaaatctatgtgatgcagctaaagcaggattaagaggaaatgtatagtgctaaacac<br>ctacatcaagaacttagaaatataccaaattaataatctaacatcacacctagaggaattagaaaatcaagaccaaactaatcccaaagctagcagaaga<br>aaagaaacaacaaaaatcagagaagcactgaagaaaattgatatgcaaaaattcatagaaaagaccaacaaattcaaaagtgtatttcaa	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	60	1326	111	NA	intron:PTPRD:NM:130392:2/44	
0	chr7	134000548	134000962	2000199	0	+	L1HS180; RIP_L1_chr7_133_01	GGAGTGTAGAATACTGGGGAAAATC	CTTATTTCCCAATGAGCCCTGTA	LINE	L1	L1HS	aggatttcatttatatgaaatacccagaataggcaaatctttagaaacagaaggtagagtggttgttgcctagagggtagggaggatggaagattttgca<br>agtgatttgctgatgggtacagagtttcttgttggggtgataaaaatattctaaaattgattgtagtgagggttgcacaactctgaatatgctaagagcc<br>attgagttgtacactttgtgtgggtgaattgtatgtgaattatatctcattaaagctggaaaaataatcaatggaattgaaaggttaaaggatttgtcat<br>tggcctagaaaacagtggggggtggcaaacatacggaagtgataacaaaactgaaatgcatggctgtggagtgtagaatactggggaaaatc<font color="green"><u>AAAGTGCA<br></u></font><font color="red">CATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTA<br>TCGCAAGAACAAAAAAACAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGG<br>GACTGTGGTGGGGTTGGGGGAGGGGGGAGGGATAGTATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATG<br>TATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAATAAAATAAAATAAAATAAAAATTAATGAAAAAA<br>AAAAAAAAAAAAAAA</font><font color="green"><u>AAAGTGCA</u></font>gctttgaccactggggcagaagtggacttacagggctcattgggaaataagcaggcattggtcttcaggcagcttcc<br>agtccttcatctaaagggctttttattttattttattttttatttttatttttttaagttggaagtatgaaactgaatgaccttttcttttcttttagag<br>attaatgacattttcttttcttttcttttcttttcttttttagacaaagtctcgctgtgttgcccaggctggaatgcagtggttcgatcttggcccactg<br>caaccttcgcctcctgagttcaagcgattctcatgcctcagccttctgagtagctaggattataggtgtgtaccaccacacctggctaatttttgtaatt<br>ttttagtagagatgg	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	56	507	84	NA	intron:BPGM:NM:001724:2/3	
0	chr6	32784565	32784993	2000200	0	-	L1HS242; RIP_L1_chr6_032_03	AGTTCACGGTCTCTATCTCTCCTTT	AACCTGTCTTTGACTGTTGAGC	LINE	L1	L1HS	agtcccaagtacagattatataagtcatacccttagataacattatttgaggcctatgtatgccataaaataggtctaagtgttttatatgtattacatc<br>atgggtcctctcaacaacctactttgtggttactaaaggattacattgcatgtaaatataaaatactatattaatgaaatcttagttaatctacaaagtt<br>ccacaaaataaaaacagcctaaattgtaatgttgtcaataatcataatttatgagcttgagcacggagtaaatttagattgtgtttttactaccaccaaa<br>tgatgcacatccatttacctagttcacggtctctatctctcctttctcatttatgttaatccaaatagtgatacacacagtgttatgcagc<font color="green"><u>CATAAAAAA<br></u></font><font color="red">TGATGAGTTCATATCCTTTGTAGGGACCTGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGTGTATTCTCA<br>CTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGC<br>ATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATG<br>TACCCTAAAACTTAGAGTGTAATTAAAAAAAAATAAAAAAAATAAAAAAAAAAAAACAACCTAAAAAAAAAAATTACCTTCAGGCGCTATATGTATAAAG<br>TGTATATAAAACATAAATG</font><font color="green"><u>CATAAAAAA</u></font>aaaaagagttaaagaaagaggaaagaaacacaaaaagtggctcaacagtcaaagacaggtttattttggaga<br>ataaacctgagagggcttctggctgatttcagtcaggagccctctctcttacagactaagagtatttaagggtttggggcgaaaggcttgaatgtttctg<br>tgtggagaagaagtttattgtggggttggaatgtctctggttggaggggaggttatcttgggtttggcatctctccggtcagaggggaggttatcttggg<br>gctggtatgtctctggttggagaggggtttatctcagggttggaatgtttctggtcagaggtatcatttgtggtttaaggtcatgctgccattagccatt<br>aggctgatgccctttgggt	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	58	576	150	NA	intergenic	
0	chr1	101751578	101751579	2000201	0	-	L1HS308; database26; RIP_L1_chr1_101_01	CCTACTAGGCCCTCTTCTTTTGTAT	GTCTTGTTGTGCCAGACACTTTA	LINE	L1	L1HS	gtcatgagtgagactcatttgaatactatcagtttctacaatttaatttcctctcctacagggttgtaaactagtctggacagagaaacgcaaaggtaca<br>caccctataaagtcccattatccctaaagggaatctcatttaaacactcctctaaaaggacaatcatctcttttgccaatttctaaatctttgaatattt<br>tcttcacaaatctaacgtgaattatgtaatcattccttttcctgtataatggatctatagaaaatgaatgttttaattggcctactaggccctcttcttt<br>tgtatcaagatggtaataaaactttgtcatattctcataaattgtctgaaacattttcttttacagatttgttaaatttcaaactgtttaa<font color="green"><u>GAAAATCTA<br></u></font><font color="red">TTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGT<br>GCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCC<br>CGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGT<br>TCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTG<br>TTATTGGTCGATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATT<br>TGCATAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTC<br>TTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTT<br>TTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAA<br>TTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGTGTCCCAG<br>AGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGT<br>TGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGGACCTCTTCAAGGAGAACTA<br>CAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTG<br>CCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAA<br>AAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAA<br>AACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGAC<br>AAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCTTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCT<br>TCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCAT<br>TCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGC<br>TTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCA<br>GAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACAT<br>TTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGA<br>ATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAAC<br>CATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAA<br>ATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCTCAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGAC<br>TGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAA<br>CCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAA<br>GGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCA<br>GCGCACCAGCATGGCAGATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAA<br>AAGAGAGACAGAGAGATCACTTGGGTATTCGGCATATTCGATTCCCTCTAAAAGGTTCTGTATCATATTTATTCACTGAGCAAAGTCACCCTGTCAGTTT<br>CAGAATTTGAGGTCAAAGTCATTTTGAGAAATAAAGGCAGATTGTCTTTTGAAAAAAAAAAAAAAAAAAAAAAAAAG</font><font color="green"><u>GAAAATCTA</u></font>acatgacagctttt<br>aattttacattgaaatatctaactgatattttaatctaaaaggtatgaaagaaattaagtttgtgagcataacataaattttaggaaaaccctatttata<br>tttataagtttgatttgtcagatttacaaaatttgcttaaatgtttagaaagattatttcttaaagctttaattaaaagcacttttacatagtaatgtaa<br>atgttcttaatgaattatacactgaaaaatgtttaaaatggtacactttatgttatgtatattttatgataatagagaaagcacatttacttgtttttta<br>aagtgtctggcacaacaagacatttaaaatgtttcaatatagtataaaaaatttaagggaatttcaagtaactaaat	Other	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	62	3441	455	NA	intergenic	
0	chr1	82898565	82900157	2000202	0	+	L1HS320; RIP_L1_chr1_082_01	GGGATTCAAATGGGAAACAAG	CTCCTTTCCAGTATCTGCTCTTATG	LINE	L1	L1HS	ttgtatagaaaaaaactatataatctaaaaggaataaatgcttcaagaattctaaggaaaagatatttcaaaaatcaacatttattttttcagtggtata<br>tcctggttttattttcttaagagaattacaattatattattatgttggtacaaaagtaatggcggtttttgccattacttttgcaccaacctaatattaa<br>tactactttgtttagcaaagatggaatttacttgctaatgatcttttatcaggtcactcttcacacagtagcatttattgttttgaccctgggaaatagg<br>tgagcttgtattctgtgaagcctctgacctttctcctttccagtatctgctcttatgtttttcaaggctattatcatctttt<font color="green"><u>AAAAAAAATGGTTCATGC<br></u></font><font color="red">ACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGT<br>AACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATC<br>TTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGG<br>ATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCAT<br>TACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTA<br>AAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAA<br>TATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGA<br>AGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCA<br>GTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAGATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAG<br>TTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGA<br>GTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCAGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGCCCAACAATG<br>ATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAAT<br>TGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACA<br>CAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTG<br>GGTGCAGTGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAATAA<br>AATAAAAAAAAAAAAATAAAAAAAAAAGAATTGTAAAAAAAAAAATTATAAATAAAACAAAGAAGAATATGTGAGAGGAAAAAAAAAAAAAAA</font><font color="green"><u>AAAAAAA<br>ATGGTTCATGC</u></font>taaggagctaataaaaaaaaaaaatttctctctccacaaaaaagaagacaacttgtttcccatttgaatcccagttctgccacttgtta<br>agtatatgatcttggtcaagttatataacctgttggtttctgtgtgtgtgtgtttttttttttctcatttgtaaagtgaggacaataggagagttgtggg<br>gtgtttagagaattaaacgactattgtattagagggaaggggagaaagggacagaaagtgaagaaaagaagggagagaggaacaagtcaggaaggaaaac<br>cagatcagctgatgaagacaactcagcacaaaaggcagacgtgataatattggaatttctggctttaataagaagctactagtatagaggacc	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	60	1748	140	NA	intergenic	
0	chr2	126225984	126227106	2000203	0	+	L1HS335; RIP_L1_chr2_126_01	CATGCATCTCTGAACTACTGACTTG	ATAAAAACCTGTTTAGGCCAAGG	LINE	L1	L1HS	ttcttgtaatacaaaagaaaataaacaaaaatatttaagcagatctgtctatctatctatacatcaatccatccatatatatatctgcttaaatatttct<br>gtttatatgtatatctatcacctatctacctatctatatacatatatatgaagagagagagagaaagacagagatacttctcagatatttatttatttgt<br>catctgttgtctcttactgactggcatccattttcaaaatggacctccacaaaagtcaaaattcagtacattggccttgcaaaatattgtgatacaaagc<br>cagtcctcaaggaatggggcataactgcccactgggaggcacagggcttcaccatgcatctctgaactactgacttgggtcagcctcatg<font color="green"><u>AAATATAAAA<br></u></font><font color="red">GGAAATCTTTCAGTTGGTTTAGCCCCCAGGAAGAGAGCTTCAATGCCAAAAAGCTTCTCCTTCTGTGCCTGCTTTGAGTTTCCTCTTTCCAGTGAGTCTA<br>AGAGGCTGGGGAGTGGAGTTTGGGTGATACTTCCCGGGACCTGCGATAAGTCCCTCCCTTGATCTGGGTCTCCACTTCCTCATCTTTAGTAGACTTATAA<br>GAAATGGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTA<br>TAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGT<br>TTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATGTCTCTGTTTTGGTACCA<br>GTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACACATGC<br>ACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATAT<br>ACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCA<br>AGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTG<br>TGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATAC<br>ATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAGGGGGGATA<br>AAATAATCTCTAAAATTTCCTTC</font><font color="green"><u>AAATATAAAA</u></font>ttttataattaaaaaagtctactatgctgcccatgcggaaatgttatttgttgcctgaaaccaatcg<br>tgttgccttggcctaaacaggtttttatttccaggaatatcctcaccatgacaaccatcgatttaaatggggctgatgggctgtttttttaaagcccagt<br>gattttaggacttcaaaaattaggtgataagctaaagtaaacatcgaccactgcctttgttctttaggacccctggtattgtagtagtgtttgtaaaagt<br>ctgcttgatgtctttaaaaaaaattcaatccctttttcttctagcactactgatatttttctccaactagagaaaaataactttatatccaaagttacat<br>catgagaatgccatctttgctgg	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	60	1276	395	NA	intergenic	
0	chr3	41793081	41796497	2000204	0	+	L1HS375; RIP_L1_chr3_041_01	TGTGGTACAGTCACACTACAAAG	GATAGCATACACCATCATGCACT	LINE	L1	L1HS	agtttctaattcaagcatcttttcccaagtttactgaccattccaatttcttcttctataaagtaattcttcacattctatgcccattttgtcttaactt<br>ttccttttcattattaggctatttttcatatcctggatactaatcattaagaaaagtttccctacaacaagatcacaaagacagttatgtaaattttctt<br>ttaagtttttttcaagttttccttttcatattttagtcttatgtcagaaaaaaaatctaacactcaaatgtcaacaaaaaaactaattgaataaaaatgt<br>ggtacagtcacactacaaagtactaatttcaaaaaagatgaacatttctataaacagatacaaaatgatctctgaggtaagttt<font color="green"><u>AAAAAGGTACAAAATG<br></u></font><font color="red">AAATACGTCCCATCAATACCTAATTTATTGAAAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGT<br>GGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATG<br>GTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCT<br>TTTTTGGTTGTGTCTCTGCCAGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTT<br>TCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTAT<br>TGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCT<br>TCTAGATTTTCTAGTTTATTTGCGTAGAGGGGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATTGGTGGTGATATCCCCTTTATCATTTT<br>TTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGTGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTC<br>ATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCT<br>TGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCCTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACA<br>CTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCA<br>GTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAG<br>AGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTACATGGTCAATTTAAACCCACAGCCAATATCATACTGAAT<br>GGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGG<br>CAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCC<br>CACTGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCGCAAGCATTCTTATACACC<br>AACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGA<br>AGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAA<br>TATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACT<br>TTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTAT<br>ACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATAT<br>CTACAACTATCTGATTTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGT<br>AGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACCTAAAACCATAAAAACCCTAG<br>AAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATG<br>GGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCA<br>TCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCACAAAGTGGGCGAAGGACATGAACA<br>GACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAG<br>ATATCATCTCACACCAGTTAGAATGGCAATCATTCAAAAGTCAGGATACACAGGTGCTGGAGAGGATGTGGAGAGATAGGGACACTTTTACACTGTTGGT<br>GGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGG<br>TATATACCCAAAGGATTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCC<br>AAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAG<br>GGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAAT<br>GAGATCACTTGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGTGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTA<br>GATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAAT<br>AAAAAAAAAAAAAAAA</font><font color="green"><u>AAAAAGGTACAAAATG</u></font>ggccagatgccgtggctcacatctgcaatttccaacactttggaaacactttgggaggctgaggcagg<br>tggatcacctgagcccaagagctcgatagcagcctgggcagcatggcgaaacccagtctctaccgaaaatacaaaaaaaaagccgagtgtggtggcacac<br>acctgtggtcccagccaccctggaaggtggaaagacagcttgagcccaggaggcagcggtttcagtgagccaagatcacaccactgtactccagcctcgg<br>agaaagagaccccaccctgggtcaaaaattaaataaagtgcatgatggtgtatgctatcttttatcttttatattaaaatataaaaatttatattaaaaa<br>tataaaagatgttatc	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	60	3862	430	NA	intron:ULK4:NM:017886:21/37	
0	chr3	106788698	106793718	2000205	0	-	L1HS378; RIP_L1_chr3_106_02	CTCCCCTTTTTGCCTTACTTCT	CTTACTTGCAATAGCCCATTCAC	LINE	L1	L1HS	tttttcttttttttctgagacagagtctcgctctgtctcccaggctggagtccagtggcatgatcttggctcactgcaagctccgcctcccgggttgaca<br>ccattctcctgcctcagcctccccagtagctgggaccacaggcgcccgccaccacgcccggctaattttttgtatttttagtagagacggggtttcaccg<br>tgttagccaggatggtctcgatctcctgagctcgtgatccgcccacttcggcctcctaaagttctgggattacaggcttgagccaccgcgcccagccatg<br>aaccagatatttctaagtataggtgcatggaggtcattagaaaataaaataacgatcacaactttattcagctgaattttagtctt<font color="green"><u>AAAGAGAAGTATTT<br></u></font><font color="red">TTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGA<br>TAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTT<br>GGTTGTGTCTCTGCCCGGCTTTGGTGTCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGA<br>AGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCA<br>CAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAG<br>ATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATT<br>GTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATGCTTTCAAAAAACCAGCTCCTGGATTCATTGA<br>TTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGTTCTTGCTT<br>TTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTGGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCT<br>TTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGT<br>CATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGACA<br>GTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAAT<br>GTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCT<br>GTCTCATTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTCAGGACTTGCTT<br>TATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTG<br>TCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTTGCTTGGTAGATCTTCCTCC<br>ATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCT<br>GTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCT<br>CATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGCGCTT<br>CCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAGCGTTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAG<br>TTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGA<br>TCCGCTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGA<br>CAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAA<br>GTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACA<br>TAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTG<br>ATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAAGCTTCTGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGAT<br>GCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAATCTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCT<br>ATGACAAACCCATAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCT<br>ATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTT<br>GCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCA<br>ATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAA<br>ATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGA<br>ACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAAT<br>GACTTTCTTCACAGAATTGGAAACAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCT<br>GGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACA<br>GAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAA<br>ATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGTATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTA<br>AACATTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAG<br>CAATGGCAACAAAAGTCAAAATTGACAAATGGGTTCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTAC<br>AACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAAC<br>CCCATCAAAAAGTGGGCGAAAGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCA<br>TCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAGCAGGTGCTGGAGAGGATG<br>TGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAA<br>ATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCAC<br>TATTCACAATAGCAAAGACTTGGAACCAAGCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGC<br>CATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACTGC<br>ATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGG<br>AGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAAT<br>GTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAGAAAATGGCTTACATGAATTTCTCCTTTTTATCTTTAA<br>AAGCTTCCCCCTTTCCCCAACCCCTTTGGATGTGTCTATGGTTCACCATAGCATGCATATGTCCCAGATTGCAATCCCTTGCTATTCCTGAATAAACTAC<br>TTTTTGGGAAAAAAAAAAAAA</font><font color="green"><u>AAAGAGAAGTATTT</u></font>ggataattacagggaaaaacaaaggcattttaggtgaatgggctattgcaagtaagtcaacaacg<br>ttgaaataaaaaatattttttcatactgtggaatacagactcttcagaaagtacttttctgagcttcacattccttatttacatgaatagattgtgtgtg<br>tgtttataggtgtgcattacactttaaaatctaaatacaggctgagcacggtggctcacgcccgtaatcccagcactttgggaggctgaggcaggtggat<br>tacctgaggtcaggagttcgagaccagcctggccaacatgtgaaaccctgtttctattaaaaatacaaagaaacaaacaaaaaaattagcccggtgcggg<br>tgtcctggtgcatgcctgtaa	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	60	5569	646	NA	intergenic	
0	chr4	20770101	20776195	2000206	0	+	L1HS410; RIP_L1_chr4_020_01;AC226616;AC212263	GCTAAGCAATGGAGGAAAATATCG;NA;NA	TGTACATGGTGTGAGGTATGAA;NA;NA	LINE	L1	L1HS	tataatagcttcataaattgataacttagtaaagttatcaattttccccaaattgatttacagagtcaataaaatccaaaccaaactcacagcgggcatt<br>gtttatttggtagaaatcaacaagctgatttgaaattaatgtggaaatccaatgaatctagactagccagggaaattttaaaagaaaagaaagaacaaag<br>ttggaggaataacagtgccagaattcaagactgattataaagctacaattattaatatagtgtgtgtcattggtgtaataaaagacaagttaatcaatgg<br>aatagaaatggacccatgaatatgtagaatattgatttttaataatgctataggctaagcaatggaggaaaatatcgtattttt<font color="green"><u>AGAAAATTATACTAAA<br></u></font><font color="red">GATATGTTTGAGGGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTC<br>CATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATT<br>GCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATA<br>TTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAG<br>CACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGC<br>TCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAA<br>CCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCCGGAGATCTGAGAACGGGCAGACTGCCTCCTCA<br>AGTGGGTCCCTGACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCT<br>GCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGT<br>AGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCA<br>GCAACAGAACAAAGCTGGATGGAGAATGATTTTGATGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCA<br>AAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAAC<br>CAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGTGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATG<br>AAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTG<br>GTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGT<br>TCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAA<br>AAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAA<br>GAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAA<br>ATACTTTATAGACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGG<br>TACCAGCCGCTGCAAAACCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGA<br>CAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGA<br>CCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAA<br>CAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGG<br>GATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGA<br>CTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTG<br>AACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATT<br>CCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACT<br>AGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCA<br>GAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCAC<br>TAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAG<br>CAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAA<br>AGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCA<br>CCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACAC<br>ATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATCGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAA<br>AAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAG<br>AGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTT<br>GATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCT<br>GGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAG<br>AAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAACTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGA<br>CAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTC<br>AACATAGTTTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAG<br>ACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGT<br>ACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATAC<br>CTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACA<br>TTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGAC<br>TTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCTCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGA<br>GGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAA<br>CAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATG<br>GTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAAC<br>GTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAA<br>TGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAAC<br>ATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCC<br>ATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCA<br>GAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGG<br>AGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATA<br>CCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTAT<br>TCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCAT<br>AAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATA<br>TTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGG<br>GATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTG<br>CACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAATCATATGTTTGAAAGCATCAAAAAAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AGAAA<br>ATTATACTAAA</u></font>aattaggtattcaaatgaaaattatttaattcatacctcacaccatgtacaaaaattaactcaaaatgcatcatagatctaaatataaa<br>atgatacaacttctagaaaacaaggaaaaaaatcttagtactcttggattaggcaaaggttttctagatatgagaccaaaaacataatccataaaaaaat<br>taagtgggactccattaaatttgaaaattctggtcttttaaagacactgacaggaaaatatagttatatagctaatatgggggagggagtggtatggatt<br>gaatgtttgtgtcctctctaaaattcatgttaaaactaaatttccaatgcagcagcattaagaggtgcggcctttaagagatgacttggccatgc	UCSC;UCSC;UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R,Wilson RK, Eichler EE. A human genome structural variation sequencing resource reveals insights intomutational mechanisms. Cell. 2010 Nov 24;143(5):837-47.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=21111241">PMID:21111241</a>.</LI><LI>Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R,Wilson RK, Eichler EE. A human genome structural variation sequencing resource reveals insights intomutational mechanisms. Cell. 2010 Nov 24;143(5):837-47.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=21111241">PMID:21111241</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR;E: fosmid-end sequencing;E: fosmid-end sequencing	NA;NA;NA	57;NA;NA	6211;NA;NA	100;NA;NA	NA;NA;NA	intron:KCNIP4:NM:001035004:1/8;intron:KCNIP4:NM:001035004:1/8;intron:KCNIP4:NM:001035004:1/8	
0	chr4	79488159	79494219	2000207	0	+	L1HS413; RIP_L1_chr4_079_01;AC208184	TCATGAGCATCACTCTTACCATGT;NA	ACTCAGCTGACTTGCCATAAATGT;NA	LINE	L1	L1HS	tgttcctgtgtgcctctgtgctgttacatgctcttcccttctaacaagggtgtcctcaactggcaccatctgcaaacatcaaataagcactcaagttcaa<br>gttcctcttattcactttggataaaatattctctgatccttctttgacacctgttgcatttgggatgtgtatgtgtgtgtgtgtatgtgtgtgcgtgtgt<br>gtgtgtgttttttttttttttttttggtcatcccttcctaagcatcttgagagaaggattgaagtctgattcaatcctatattaccttccacagtgcctc<br>atactcagctgacttgccataaatgttaattgaagtgaactgttttcttttgtggagctaaactgagtaaaacataaattggatac<font color="green"><u>AAAGCTTCAAGATA<br></u></font><font color="red">GGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTA<br>CCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACTGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGG<br>GAAGCGCAAGGGGTCAGGGAGTTCCCTTTCTGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTC<br>AGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCT<br>GAGACCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCAGGAAGCTCGAACTGGGT<br>GGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGAC<br>TTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCT<br>GACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACAGCAGGGTATTCCAACAGACCTGCATCTGAGGG<br>TCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCA<br>CAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACA<br>AAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAA<br>GTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAG<br>AACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGG<br>GAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAA<br>AGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGG<br>AAACACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAG<br>GGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGG<br>CCAATATTCAACATTCTTAAAGGAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAG<br>ACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCACTAAACATGGAAAGGAACAACCGGTACCAGCCGCT<br>GCAAAGTCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAAT<br>TCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGT<br>GCTGTAGTCAGGAAACCCATCTCATGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGC<br>AGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAA<br>CAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTGAGTGACCTACAAAGAGACTTAGACTCCC<br>ACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACAAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCT<br>GCACCAAGCGGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGAC<br>CACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGA<br>TTAAGAATCTCACTCAAAGCCACTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACAGAACGAAATGAAGGCAGAAATAAAGAT<br>GTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTAC<br>AAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAG<br>AAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAA<br>AATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACA<br>GAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCC<br>CAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGG<br>ACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTC<br>CCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTG<br>ATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGG<br>CTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTT<br>GACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAG<br>CCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTT<br>GGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATT<br>GTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGTAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCAC<br>AAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCA<br>ACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCA<br>TGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAG<br>AATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACT<br>ACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCA<br>GAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAA<br>ACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACCTAA<br>AACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAA<br>GCCAAAATTGACAAATGGGATCTAATTAAACTCAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAA<br>TTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTG<br>GGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAA<br>ATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAA<br>CACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCC<br>AGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCA<br>AAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATG<br>AGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCTCAAGAACAAAAAACCAAACACCGCATATTCTCACTCAT<br>AGGTGGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCAGGGGAGGGGGGAGGGATAGCATTG<br>GGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACC<br>CTAAAACTTAGAGTATAACAAAAAAATTAAAAAAAAAATAAAATAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AAAGCTTCAAGATA</u></font>catggtaagagtgatgctcatgac<br>gtgttgttggcagtgcaagctggcaccaaaacctagagctttgcttttacatttgacactgccactcgccacctccccttaccctccccacttcaagctg<br>tttcctcggctcctacggcagccttcccaacacattggtgagtttgtctacactgggtagaaatcactgccctataacatgaaggtcattctgttgtcgt<br>gttttatttggttagttttttaagagtaaaacaatagccacagacactgaagaaagaagtctcatttggttggttggttttgttttgttttgtagctttt<br>gtactaattcaaagcctctaaagagaatacatgatttgtaacagcttacgggtgggctgagc	UCSC;UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R,Wilson RK, Eichler EE. A human genome structural variation sequencing resource reveals insights intomutational mechanisms. Cell. 2010 Nov 24;143(5):837-47.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=21111241">PMID:21111241</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR;E: fosmid-end sequencing	NA;NA	60;NA	6199;NA	127;NA	NA;NA	intron:FRAS1:NM:025074:20/74;intron:FRAS1:NM:025074:20/74	
0	chr5	96892180	96892181	2000208	0	+	L1HS437; RIP_L1_chr5_096_01	ATCTATCATTTATCTGCCCCGTCT	ACAAGGATTAGCAGGAAGTCTGTT	LINE	L1	L1HS	ttttttatcaacaaaatttacacacatagaaaaatttagaaaataaagaaaataaaagctactgatgctattgatgatacaaatgcacatacatttatgt<br>gaattctgtaatctatgtataacatgtatgtgatcacattatctttattattttgtgatatgctttttgatacttagcaatatagtgtggatatctatca<br>tttatctgccccgtctttcaaatgtatatacaagcattatttttaataaatacatagtggtattctataattgatttaatctatcatatactattgactt<br>tcatattgcttccaaattttacttttacatgtaattatgcaattagtctatacaaatattttgccattttttactgatttttt<font color="green"><u>AAAAAATACATTTTTAG<br></u></font><font color="red">CTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGG<br>GTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTT<br>CCTATTTCTCCGCATCCTCTCCGGCACCTGTTGTTTCCTGACTTTTGAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTT<br>GCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCA<br>CTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAAATT<br>TTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTGAGTTTAATTAGATCCCATTTGTCAATTTTGTCTT<br>TTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTT<br>AGGTCTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTT<br>TCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTG<br>AGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAG<br>TGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGGC<br>ATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGT<br>TCTTCCATTTGTTTGTCTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTA<br>TTTTGTTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACA<br>TTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTG<br>CAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAA<br>TAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCA<br>TAGATAGCTCTTATTATTTTGAGATATGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTG<br>CATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGG<br>GATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAG<br>GATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTT<br>TTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCCATTACTGGGTATATACCCAAATGACTATAAATCATGCTGCTATAAAGACACATGC<br>ACACGTATGTTTATTGCGGCATTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAGAATGTGGCACATAT<br>ACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCA<br>AGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTG<br>TGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATAC<br>ATATGTAACTAACCTGCACAATGTGCACATGTACCCTATAACTTAGAGTATAATAAAAAAAAAAAAAAGAAAGAAAAAAAA</font><font color="green"><u>AAAAAATACATTTTTAG</u></font>aa<br>tccataaattcataccaattaacagacttcctgctaatccttgttgcatataatagtaatgggtaattcccttaatcatattcaatttactaggcagatg<br>atatctttaatgtttatttttattaatattgatatttaaaatttttatttttaatatagtttgatttaatatctttgattttattatagttattacatat<br>ttgtatattaatatttcttttgtaaatggcctaatttttaatttctcacttgtatacaaggagataattcacatttttattatttataattgttattttg<br>ttgactgcatgatatcatatatatttagcatgatgaatataaaagagactttttctgttgcatctatattttggctacagc	Other	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	60	2954	256	NA	intergenic	
0	chr5	151456437	151456556	2000209	0	+	L1HS447; L1HS448; RIP_L1_chr5_151_02	GTACATCTCTTTGGACACTTCCACT	GTTTAAGTCCAACATCCTGTTCTG	LINE	L1	L1HS	actaaaagaggcttagtttgggagagggagaaaatgacatcaatccaagctggaggagcaagcaaggactagatcatgagttggatattcattttgttta<br>agtccaacatcctgttctgttgctccttttgtcaattagagcatgaagaagccacagattaattctcaaactttcatatacatcggtctctcccagggag<br>cttataaaagtgcaatacttgctcagagcttctgacacagtagccataataagcacaggttctttctgttggaagtcatagaaattcaactaaaatcaac<br>ttaagcaaagccaaaacagaagtaatggcttctctattttggaatcaaagaggtggtgttagcttcaggcatgactccatctagcagtt<font color="green"><u>AAAATAATATC<br></u></font><font color="red">CCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTT<br>AGAGTATAATAAAAAAAAAA</font><font color="green"><u>AAAATAATATCA</u></font>attaaagctccctctctcttttctaaaaagttgttcttctaatttatttattggcttcatccttagga<br>atgctttctccacatggtagtaaaaataggcatcagaactccaggcttgtattatcctcataggtagtgatcccagaggaaagggtgctatgttctcttt<br>ttcatttccacgttaacccctctaatggatttggattggccctgctcgggtcaaattcccacagtggaagtgtccaaagagatgtacatcatctctttgg<br>acactctctttagtttgctgcctaagcagagaaagcagggtcacttgagtgatagaatcaccagattcacttggcttggggaaaggatagtttccataaa<br>gaagaaatgttcaaacaggaa	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	59	691	560	NA	intergenic	
0	chr4	88702925	88705336	2000210	0	+	L1HS480; 238204; RIP_L1_chr4_088_02	AGAGGTAACCACTACCTTGCAACT	GCCTCATGACAGGAGAAGAGATAAA	LINE	L1	L1HS	aggttgtggatcagtagattagtttatagtttgctggtgggagtgttcaaccactttagcaaggaatttggcattatctcttaaagctggagactcatat<br>atctatgatgagtaattctacactgggcatatactcaaaagaaattattgcaggtgtacattaggagacatctacaagaatgtccatggaagcatttctg<br>tttgaaatagcaaaagctttgaaaaaaacttacatgcctcatgacaggagaagagataaattgtggtaccttcatacaataaaatatcttactggaaaga<br>aaatgaatataaacgatgctagaaatataatttgaataaaaattaagctctcaaaaggttacatgtactacaaaacacatttt<font color="green"><u>AAAAAGTTACAAACAAC<br></u></font><font color="red">ATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTA<br>TTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAA<br>TATTTTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTC<br>CCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAA<br>TAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCT<br>CCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGC<br>CAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACT<br>ACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACT<br>GCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAA<br>AAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCA<br>AAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGA<br>CAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCC<br>TTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCA<br>TTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAG<br>CTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCC<br>AGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACA<br>TTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAG<br>AATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAA<br>CCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATA<br>AATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGA<br>CTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAA<br>ACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGA<br>AGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTG<br>CAGTGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAGAA<br>AAAAAAAAAAAA</font><font color="green"><u>AAAAAGTTACAAACAAC</u></font>taaaactacccaatatgctttttaagaaatatttatattatggtaaaactgtagttctaaaaagcaaaggg<br>aagactaatacaagttgcaaggtagtggttacctctggcggagggaggcagggtatgagatagggaagataacattggaggatgttacaaattatgaatg<br>tttccattgtcatgcagggtggtgtatacacaggtatttattgcataacaaacaaattgttcaacaaacaaataggtaaataaataaataaataaaaaga<br>aggccatgcctgaaccaaggatgagaccatgtcatgaaccaagttttatgattaattaaattttaggcatccagcattagaaacacaactactggatttt<br>tgattgggcaga	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Bennett EA, Coleman LE, Tsui C, Pittard WS, Devine SE. Natural genetic variation caused by transposable elements in humans. Genetics. 2004 Oct;168(2):933-51.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15514065">PMID:15514065</a>.</LI></UL>	C:Reference; E:Insertion-specific detection:PCR	NA	60	2701	272	NA	intergenic	
0	chr13	85238148	85238149	2000211	0	-	L1HS513; RIP_L1_chr13_085_01	CCAAACTTGAGCCTCCTGTAATC	CCTTGAAATAAGCAGGAAGAAGC	LINE	L1	L1HS	atgttactttcttctctagccctgataaaaatataaaaggactgattcctatataatattaatttatagtgcatactatccctttatatgaaaagaatgt<br>gaattaaaagtaatatttaaagaaagaaggttattgtgaataaactaaaaacaaaaaggcatatactattttgaatgtggtaagattcaatattttgttt<br>ccttacaatcacgagatcaaagaagctaagctccttgctgggaacttccctgtatatgctaaggaaactcttggtaacttttggtatagaataatcttga<br>aagccccagggctattattattctaaattgagagaaaataaaaatatggcatatattgagtgggccccaaacttgagcctcctgtaatccttgacacg<font color="green"><u>AA<br></u></font><font color="red">TGTGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTCGAAGTCAGTGTGGCGATTCCTC<br>AGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACAC<br>GTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACAC<br>CATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAA<br>CAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGT<br>GGAGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATAT<br>GTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAATTAAAAAAAAAAAAAA</font><font color="green"><u>AA</u></font>gcttcttgatacacagctaggtcg<br>ttagttattatttattgaattcactgaaccaaggtttaggattactagccaggcttcttcctgcttatttcaaggatatgcctgtaccaaattgttaaat<br>cctcattccaatcccaaacttatacatatcccagaaatcttattaccatcttatacagtatgtgccttttaaaggcttggtattaggttagagcacctta<br>actctcatttctcttttgcttttaagtttataatgatagaaaatttcctcaactacttcattctacaaatctaattggtaaaatgaagtgtttaaggcac<br>tgaatcaaatttttctttttcatatgttttccttttactgcgaagtcatacctgtagaatgaagactgggcctt	Other	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	61	809	142	NA	intergenic	
0	chr16	18740046	18745877	2000212	0	-	L1HS526; RIP_L1_chr16_018_01	ACCCTCCAAGGTAACTGAATCTTA	ATGCCCATGCTTGTTAGCTACTAC	LINE	L1	L1HS	tatatttatacctatatatatatattttggagacagagtctcgctttgttgcccaggttggagtgcagtggcactatctcacctcactgcaacctctgcc<br>tctcgggttcaagcgattctcctgcctcagcctctgaagtagctgggactacaggcacgcaccaccatgtccagctaatttttgtatttttatagagacg<br>gggtttcaccatgctggccaggctggtctcaaactcctgacctcaggtgatctgcccaccttggcctcccaaaacactgggattgcaggcttgagccacc<br>gcacccggcctatattttttatttcttaccctccaaggtaactgaatcttatagtaacaggtatattttgaaccaggagt<font color="green"><u>AGAAACATACTAAATATCTC<br></u></font><font color="red">CGAGTCAAAGAAAGGGGTGACGGACGTACCTGGAAAATCGGGTCACTCCCACCCGAATATTACGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAG<br>ACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCT<br>GGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCC<br>TGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGA<br>GAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCCCTGACCCCCGAGCAGCCTAACTGGG<br>AGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACC<br>AGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAA<br>CTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACTAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCT<br>GAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAA<br>TGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGA<br>GCCGATGCAATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAA<br>TGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAA<br>AACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCT<br>CGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCT<br>CAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAAT<br>TTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATGGACAAGCAAATGCTGAGAGATTTTGTCACCA<br>CCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCACTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATC<br>GAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATA<br>AATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCA<br>GAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCAAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAAC<br>AGACTTCAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTAT<br>GCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCC<br>CACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAG<br>AACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGC<br>AAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTA<br>CATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACAC<br>CACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGAC<br>ACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGG<br>AAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAA<br>GAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTAC<br>AAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTC<br>TGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCA<br>GAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATT<br>CTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAA<br>ACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGT<br>AATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAA<br>ACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGG<br>AAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGA<br>GAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCATCTCAGCG<br>CAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAA<br>CAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACTTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAA<br>GGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATG<br>GCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATAT<br>GGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTAC<br>AGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTG<br>ATCTTTGACAAACCTGAGAAAAACAAGAAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAAC<br>TGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGACTTAAATGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGG<br>CATTACCATTCAGGACATAGGTGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAACCAAAATTGACAAATGGGATCTAATTAAA<br>CTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGC<br>TAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAA<br>AGAAGACATTTATGCAGCCAAAAAACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACA<br>CCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAAC<br>TAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAA<br>GGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACA<br>ATGATAGTCTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGA<br>AATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGG<br>ACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGCGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTA<br>GTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTGAGAGTATAATAAAAAAAAAAAA<br>AAGAAAAAAAAAAGAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AGAAACATACTAAATATCTC</u></font>aggtttttaatgaatttgataattactgtgccttaatacattaaggaa<br>attttgatgattagaaaaactttgaatactgaatttgttttgtgaaatgtatataagtagttctattttgtttattagtagtagctaacaagcatgggca<br>tttcttatgttgtatagataatggaattttgtgatgcctaaggcagcagaatatttttctgaactattatagtgactggatattgaaagctatgtacata<br>atccttctacttatttttttacataagagaaacttgccttaatgaaagttatgtgtatctttatattgtctgtcctttatacttcatgtactcagtagta<br>actgacatttttgtttttgtaaattaatagca	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	60	6076	223	NA	intron:SMG1:NM:015092:55/63	
0	chr12	60581313	60581484	2000213	0	-	L1HS5; 238698; RIP_L1_chr12_060_01	TCAACTACAAAGTTGAAGAATAGG	GTTTCCATCAACAAGATCATGTCAAG	LINE	L1	L1HS	gtatatctatttgtattgtaataaccagtaactggcatggtatacaatcaaaaattgcctcccgatgttgtgtgagacagataattaatgtaacaaacct<br>gtgtggagccaaatgtttgattagtgtggtgccttcaattcaactcctatagtacttcttctgatcttacctgaaaaaaataatttttacaggccaagta<br>ctaatgctttcttcaaatggcttctggagaaaataagtttttgttccagatattgtttatgttgtgtgtctttttttttgttatagaagtaccatatatt<br>tgtttcatcagagttggaaagtaacaatataatttatagaatgtttttcaactacaaagttgaagaataggattaaaattattgtt<font color="green"><u>AAAAAGTGAAATTG<br></u></font><font color="red">GTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTA<br>ACTAACCTGCACAATATGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AAAAAGTGAAATTG</u></font>aagagttaaaactt<br>ggaaagcaaattaagtttgacattagaataattattcttagaaaatatacaaaacactattgggaaaagattattagtcaagtgaacatatgtacaaata<br>catttcctaaagattgttataaagacatatatttggtaaagttcatggaaaagtgtctagcttcttaaaagagattccaacatacctgtaataaagtaga<br>ccaaaacaggtaatcacagacacagctcaaaactccacatggattggccaatttaatgaaaaaaacttgacatgatcttgttgatggaaacaaagaaatg<br>ataatactgtctgcttacttgaaaaattattcactgttcagaaattaatagataccaatgaaagtcataggt	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Bennett EA, Coleman LE, Tsui C, Pittard WS, Devine SE. Natural genetic variation caused by transposable elements in humans. Genetics. 2004 Oct;168(2):933-51.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15514065">PMID:15514065</a>.</LI></UL>	C:Reference; E:Insertion-specific detection:PCR	NA	58	546	376	NA	intron:FAM19A2:NM:178539:1/5	
0	chr2	159857373	159859894	2000214	0	-	L1HS21; 237829; RIP_L1_chr2_159_01	GTGTTGGCATATTTCTATTCG	TAAAGGCTGAACTTTGCATTG	LINE	L1	L1HS	aggtcaggagtttgagaccagcctggacagcatggtgaaaccttgtctctataaaaaaaaatacaaaaatcagccaggcatggtggcgtgcgcttgtagt<br>cccagctactcaggagactgaggtgggaggatggcttgagtccaggaggtcgaggctgcagtgagctgtgatcacgccattgcactctagcatggacaac<br>agagtgagaccctgcttcagaaaaaataaaatgcaaataaaatgaaaagaaagtaaccaaattatatttccctatagtagttttcaaattttggacaaat<br>aactataactaacaagtttgagtttaatccattttaagcaaagagatattgtgttggcatatttctattcgtaattcactgaagtgataag<font color="green"><u>GAAATTCTA<br></u></font><font color="red">TAGGAGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGAATTTCCATCTGAG<br>GTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACTGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACC<br>TGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTT<br>TTCAGACCGGCTTAAAAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAG<br>TCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCTGCCATTGCCCAGGCTTCCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTG<br>GGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAGCAAAAAGGCAGCAGTAACCTCTGCA<br>GACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTACCTCCTCAAGTGGGTC<br>CCTGACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTACTCCAACAGACCTGCAGCTGA<br>GGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAA<br>CCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGA<br>ACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAA<br>GAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTC<br>GAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCTATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGA<br>AGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGGCCAAATCTACGTCTGATTGGTGTACCT<br>GAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTC<br>AGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTT<br>AAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGGAAGCCCATCAGACTAACAGCGGATCTCTCGGCGAAGGACATGAACAGACACTTCTCAAAA<br>GAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACAC<br>CAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCAGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACT<br>AGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAG<br>GACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAA<br>TGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAA<br>ATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGA<br>CACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAG<br>TGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAGCCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAA<br>AAAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>GAAATTCTA</u></font>aacaatgcaaagttcagcctttaattactacacttctatctctctggcagttatctagctgcaaaagca<br>ggtacctcaaaacttagtggtttaaaataacaatctgcaacttggacggggcttgacaggaaggctcatctctgcttcacatgacatcagctttggtgtc<br>tccaccgagagttggcgacccctctccaagaggggtcactcacaggcactggttattggctgggagctcagcctggattgagagataggaacttcattcc<br>tctccatgtgggtctcttcatgtagcccaggcttcctcactgcacggtggctggctgctgagggaaagtgactcaaggaccgtattgcctcttaagaccc<br>aggcttggaagttatacagtgt	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Bennett EA, Coleman LE, Tsui C, Pittard WS, Devine SE. Natural genetic variation caused by transposable elements in humans. Genetics. 2004 Oct;168(2):933-51.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15514065">PMID:15514065</a>.</LI></UL>	C:Reference; E:Insertion-specific detection:PCR	NA	57	2606	84	NA	intergenic	
0	chr4	57782108	57782491	2000215	0	-	8419; L1HS57; RIP_L1_chr4_057_01	CAGCAAGACTCTGTCTCTAAAATGAT	GGACTTGAATTTGGTCTTGTTTCTA	LINE	L1	L1HS	ataagtcaggtatagtggtgcatgcctgtactcccagctacttgggaggcagtagtgggaggatcccttgagcccaggagttggatgctgcagtgagtta<br>tgatcacgccactgcactccagcctggattgcagtcaaagaaggtcaggcacatctagccacctattaagatctgtttgaggaagttagtttgaaaactg<br>gtctagaccacagccaatcacctcacctccaaccttccctccaccagctcccatagcagggttaacagagcaaatctgtgcttgtcaaagtcagactata<br>attttcttatttcagtttctccatgagcaaaatggggaagataatgccagcaagactctgtctctaaaatgataatgacagctgct<font color="green"><u>AAAGAACATTTACT<br></u></font><font color="red">CACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAAC<br>TATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTG<br>GGGACTGAGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACA<br>TGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AAAGAACATTTACT</u></font>at<br>gtatcagacactgtactaagcgctgtgcatgtataatctcatgtagtctttgcaacaaacccttgagataggtgttatttccatttttcaactaaattac<br>agaatgtgatagaaacaagaccaaattcaagtccaacagcatagcccatgctattaacgaccatgccttcttacctcctgtgattgctctgcagggcaga<br>atgactacgtaaagcctgactgaaactagtcatacaggaacaggaaacccagagtaagggtctgcctcaggcctcagcaaaggacatttagttacaggga<br>agaccagaagtatcaggttataacccagcttcacagacagctttctgtaggtgttgacacacatcctttcctctcttcctggtc	UCSC	<UL><LI>Bennett EA, Coleman LE, Tsui C, Pittard WS, Devine SE. Natural genetic variation caused by transposable elements in humans. Genetics. 2004 Oct;168(2):933-51.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15514065">PMID:15514065</a>.</LI><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	C:Reference; E:Insertion-specific detection:PCR	NA	59	589	195	NA	intergenic	
0	chr22	17091526	17092024	2000216	0	+	L1HS85; RIP_L1_chr22_017_01	TTTGTATGCCTTGTGTTTTGTATTG	AGGAGAGTCTCATCTCCAGAGTTAC	LINE	L1	L1HS	cgtccttatttctgttcctctgacttgatcatttcaagtgtcccatcttcaaattcactgaatctttcttctgttgctcaaatctgcttttgaatccctc<br>tggtgaacttttatttcaatcactacacttttagttccagaatttatttattttttttctttttaggttttctatctctttattgatattcccattttgt<br>ttacacataattttactgactttctccacatcttccttcagttctttgaccatctttaagaaagttgttttaaagtatttgtgtagtaggttaccatctg<br>gtctttctctggaacagtttctgttgttgtttttcctttgaaataccatattttcttgttttttgtatgccttgtgttttgtatt<font color="green"><u>GAAAACTGGACACTT<br></u></font><font color="red">AAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAG<br>ACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGTCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGA<br>AACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGG<br>AAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTG<br>CAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAA</font><font color="green"><u>G<br>AAAACTGGACACTT</u></font>gaatataataatgcagtaactctggagatgagactctcctcttcctcagggtttgctgttttggggttttgttatgttttacattg<br>ttgtaggttgtctccatgctgaggatcaacctgagttgtaagcttgaggtcttctcaggtctgaagctgctcctttccctgggcacacactcctctctcc<br>aaggatgtgtggtaactttaatttcctctgtgtatgccattgcttttgagtgtcctagtctttaatgtttggctcccaaaaaaggaaaagagaacaacga<br>aggggaagggaaatggggttctggccttttctatctcctagaagttgcttcagtctggtaagggcttgcagcagtggagtggggagttgtgagcaataa	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	58	593	79	NA	intergenic	
0	chr5	57715759	57721852	2000217	0	+	L1HS220; RIP_L1_chr5_057_01;AC226350	ATTGGCCTTCAGAAGTGATTAAGAC;NA	TAGATAGCCAGACAAACAAACCTTG;NA	LINE	L1	L1HS	tttaaccactatgcaatgctatcacttatatgataatcaataattaggcaagtatgcatgcaatttgtatacatacaagacagagacaaaaaaggttgtt<br>acgtttttcttaccgactcttgttcaaaaatgaataaatccctgctggcttctttaataaagattgagtaaatatatttagttatcttaaattattaatc<br>tataaatcagctcatactcagatatatgaaatacattctgcttttacctcattgtaaagattatgcctactgtttgcctttaaaacttaatttaaaaaat<br>gtaactttaaaagatgccttctattattggccttcagaagtgattaagacccagccaatgcagaaagagaacaaaacaaacacat<font color="green"><u>AAAAACAAAAAACAC<br></u></font><font color="red">GGAGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGT<br>ACCGGGTTCATCTCAATAGGGAGTGCCAGACAGTGGGCGCAGGTCAGTGTGTGTGCGCACCGTGCGCAAGCCGAAGCAGGGCGAGGCATTGCCTCACCTG<br>GGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGTACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTT<br>CAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTC<br>TGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGG<br>TGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGA<br>CTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCC<br>TGACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGG<br>GTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACC<br>ACAAAGATGGGGAAAAAACAGAAGAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACTAGCAACAGAAC<br>AAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGA<br>AGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGA<br>GAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGTGATGGAAGATGAAATGAATGAAATGAAGCGAGAAG<br>GGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGA<br>AAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAG<br>GAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAA<br>GGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGG<br>GCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATA<br>GACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCACTAAACATGGAAAGGAACAACCGGTACCAGCCGC<br>TGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAA<br>TTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTG<br>TGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCAAATGGAAAACAAAAAAAGG<br>CAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTCAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCA<br>ACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCC<br>CACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTC<br>TGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGA<br>CCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGG<br>ATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGA<br>TGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTA<br>CAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAA<br>GAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACA<br>AAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCAC<br>AGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCAACACATACACTCTC<br>CCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAG<br>GACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCT<br>CCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATT<br>GATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAG<br>GCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTT<br>TGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACA<br>GCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACTGCTCCTATTCAACATAGTGT<br>TGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGAT<br>TGTTTATCTAGAAAACCCCATCATCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCA<br>CAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACTTAGGAATCC<br>AACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAAGAAATGGAAGAACATTCCATGCTC<br>ATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACA<br>GAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAACCAAAAGAACAAAGCTGGAGGCATCACAC<br>TACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTC<br>AGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAA<br>AACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGACTTAAATGTTAGACCTA<br>AAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAA<br>AACCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAA<br>ATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGT<br>GGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCA<br>AATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGA<br>ACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACC<br>CAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGC<br>AAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGTCTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCTTAAAAAATGAT<br>GAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCA<br>TAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTG<br>GGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACC<br>CTAAAACTGAGAGTATAATAAAAAAAAAAAAAAGAAAAAAAAAATAAAGAAAATGTGGTATAAATACACAATCAAATACTAAAAAAAAAAAAAA</font><font color="green"><u>AAAAAA<br>AAAAAACAC</u></font>cagaacagaataaagtaaatgaaagctaacaaattcaaggtttgtttgtctggctatctattttaaacctcaagtggagacttaaccaaat<br>gtgggtttatttttctcacataagaagatgttcagaagtaggtagtcccaggcctttacagaggtttggaatgtcactaggcacgtcttatcttcccatg<br>ctgtcatcctcagtgtggggctttcatcttcatgctcacaagatggctgttgcactcctaggcatcacatacacattccaggcagaaaacaaaaaaaggg<br>caaaaggcaaagggaaagatgcccaatgcatttgtccctctcaaaacacccccagaccaccagaagatttctgtttacgacaaattaatcagaa	UCSC;UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R,Wilson RK, Eichler EE. A human genome structural variation sequencing resource reveals insights intomutational mechanisms. Cell. 2010 Nov 24;143(5):837-47.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=21111241">PMID:21111241</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR;E: fosmid-end sequencing	NA;NA	60;NA	6244;NA	135;NA	NA;NA	intergenic;intergenic	
0	chr6	66316761	66318742	2000218	0	-	L1HS226; 54985; AF417134; RIP_L1_chr6_066_02	CCCTAAGCCTGTCAGAAGTTAGTATC	GCCATGAAAGATAAGGAGATAAGAG	LINE	L1	L1HS	ttggtagtttgtgcaatatttgaaaaaaaaattgcagtttaaagtaaaattatttaaaataatttgaatcatcaagccaatttcattttcatgttaagta<br>taatgattacaagatttttaaaaataaactcctgttaaaatgtcttgaacaacttgagagaacaatgtttatttcttagttagtggattcttacttctaa<br>taaagatggatcacttttgcttagggtcactgaaaaagttccaaataaatgtaaaagcaatctttaaagacaacataaagctagcaaagtagtcgagata<br>acaagtttgagatgccatgaaagataaggagataagaggtaagtctggaatctgaatccattttgccttgaggtttctccctgatcag<font color="green"><u>AAAGATATAGTA<br></u></font><font color="red">TCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGT<br>CTGTTCATGACCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAG<br>ATGAGTAGGTTGCAAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATC<br>CCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCT<br>TCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTC<br>TACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTA<br>GATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAG<br>TATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTA<br>AAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGAT<br>ATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCC<br>TTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGTCATCTCACACCAGTTAGAA<br>TGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACC<br>ATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAA<br>TCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACT<br>GGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAAC<br>CATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAG<br>GGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAG<br>CGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAATAAATAAAAAA<br>CAACTCTCAGAAGCAAAAAAAAAAAAAAAAAGCAATCTTGCAGATATCTGACCAGTCTAAGCTGTTCAAAGATATGTTGCATGGAGAAAATAGAATAGTA<br>GAAACCTAGACAAAGACTGGGAAATAAAGATGGTCTTATCCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AAAGATATAGTA</u></font>gagtca<br>gatactaacttctgacaggcttaggggaaaaacaggttcagctacaaaagggctcagtgaaaaataatggatgggagtggacaaaaagcatctgtctagt<br>catttggggaattcactgtaccactggtccagggaggatggttgccaccttgcccctccctgagacatttctggccaactccagagcccaatgctccctg<br>cattccagaccaggacatctgtatggtggaacatcgatctccctgactaatgtaatctgtaactgttctggccaatgggcggcagccattgaaccagatc<br>aggaaggacaaggataggcagacagggttgactgggagaagctgtcagaaaaattcttcctgaggagaaagtcaggttggaa	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Bennett EA, Coleman LE, Tsui C, Pittard WS, Devine SE. Natural genetic variation caused by transposable elements in humans. Genetics. 2004 Oct;168(2):933-51.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15514065">PMID:15514065</a>.</LI><LI>Ovchinnikov I, Troxel AB, Swergold GD. Genomic characterization of recent human LINE-1 insertions: evidence supportingrandom insertion. Genome Res. 2001 Dec;11(12):2050-8.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=11731495">PMID:11731495</a>.</LI></UL>	E:Retrotransposon display:L1 display; E:Insertion-specific detection:PCR	NA	60	2114	120	NA	intron:EYS:NM:198283:1/10	
0	chr12	42263728	42265816	2000219	0	+	L1HS293; RIP_L1_chr12_042_01	TTACAATGGATACGTTAGACAGCTC	CCATAATTGGTTAGGATGATGAGAC	LINE	L1	L1HS	atccaacatttattgagtgaccatgatatttcaggcactgcaccaggtgctgaaaacacagacatccataaattatattctttgtccaaaaaaagacaaa<br>caattatataattatattacaatggatacgttagacagctcccagtaataaggaatctgacgccaatttcatttttgatgtttgactattgacagctttc<br>atgccctaccctacgcctttcccttttgtcccacataaggggaagataaaaagaaaaccttggggctccattcattggtgttggcggagaagtgcacacc<br>attcaaacccagttcctctgggaacattcactacagccccaccctctcagcacaatagaaaccaaagccactggcttcccttttcactc<font color="green"><u>AAGACATTCCA<br></u></font><font color="red">TGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGT<br>TTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGG<br>GCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCT<br>CCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTC<br>CAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTT<br>TTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTA<br>CATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGACAAGCTTTTTGATGTGCTGCTGAATTCGGTT<br>TGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGA<br>ATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCT<br>GGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAG<br>AGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTG<br>TAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCT<br>TTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTC<br>CTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTG<br>TCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGG<br>TGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGCCCAGTAGTCATTCAGGAGCAGGCACTATTCA<br>CAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAA<br>AAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAAATGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTC<br>TCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGAT<br>AGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGATGCAGCGCACCTGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCAC<br>ATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAGGAAAAAAAAAAAAAAAAAGGAATTTTGATAGAAAAAAAAAAAAAAAAAA</font><font color="green"><u>AAGACATTCCA<br></u></font>gaccagcttttatgcctgcccagcttttttttagaaagtctcattatgtgagcaataaatcttttcctaccgcttggatggagggatggaagcatcttca<br>gtctaacagtctcatcatcctaaccaattatggatgagtgtttattgccctccacaaagcaaccacaaaacatacccccgcctcctggtattcatgccct<br>tgtataattctctctgcttgaatgtgggctgagcctagtaactagcttcaagcaaatagaatacagcaaaagtaatgggatgtcttttccaaattaaatg<br>tcaaaaagactcttggtttctctcttgctcaacttctattgctctcttgctttctctgatggaaaccagttacctatgaacaggtccac	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	60	2517	417	NA	intergenic	
0	chr12	40524316	40525153	2000220	0	-	L1HS298; 31032; database22; RIP_L1_chr12_040_01	ATATACCATACTCCTTTCCCCTTCC	TGAGCCCTGTATTTTAATCACTTGT	LINE	L1	L1HS	agatgagacatgggtgatggtgatcatggaagggccttaaagccacagcagggactttggcttttactcttgaatttgatgggatgtcatgagaaggttt<br>tgaacagagaaattgcatgatatgacatatatttttgcaaatttttccttgaataccaaatacatgatatatatgtcatatgaaatatgtacatataaat<br>atattaaatataagtatagtatacatatatgtatgttcataagtatataccatactcctttccccttccctccttctttttctccctccctgtgctatta<br>attaaaataacaattttacagttaatcacagtctgtttgtaactcctgcactattgttttatatcacaggagcttaatttatattgcccaatag<font color="green"><u>AAAATA<br></u></font><font color="red">TGTAGCATCCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGG<br>AAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGA<br>TTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACAT<br>GCACACGTATGTTTATTGCAGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACAT<br>ATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGCTGAAATTGGAAACCATCATTCTCAGTAAACTATCG<br>CAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGAC<br>TGTGGTGGGGTTGGGGGAGGGGGGAGGGATAGTATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTAT<br>ACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAATAAAATAAAATAAAAAAAAAATAATTGAAAAAAAAA<br>AAAAAAAAAAAAAAAAGGAAATTTTGTGCCTTCTCCAA</font><font color="green"><u>AAAATA</u></font>gcttggaaatttacaagtgattaaaatacagggctcaaggttattaaattttgaac<br>ttgttttgctttcatactgttaaaaaaaagttcctcaagggcagggtgcaggttgagtttccctcatctaaaagcttgggaccggaagtgttttaaattt<br>aaaatttttccaaattttggaatatttgcacaaacataatgagatatctgggggatgggaaccaggtctaaacatttatgttttatatataaaccttatg<br>catatagcctgagggttttatttataatatttaaaataactggggcataaaacaaagttttgatggggttttgactgtgacctgtgatatgaggtcaggt<br>gtggaattttccacttggggcatcatatgagggtggaa	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Bennett EA, Coleman LE, Tsui C, Pittard WS, Devine SE. Natural genetic variation caused by transposable elements in humans. Genetics. 2004 Oct;168(2):933-51.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15514065">PMID:15514065</a>.</LI><LI>Boissinot S, Entezam A, Young L, Munson PJ, Furano AV. The insertional history of an active family of L1 retrotransposons in humans. Genome Res. 2004 Jul;14(7):1221-31. Epub 2004 Jun 14.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15197167">PMID:15197167</a>.</LI></UL>	C:Reference; E:Insertion-specific detection:PCR	NA	60	1037	80	NA	intergenic	
0	chr2	76380021	76382401	2000221	0	-	L1HS345; 239018; RIP_L1_chr2_076_01	CACAGCATTTACCAAAGCACTC	CTCAGTTCATTGCACAGTTTGG	LINE	L1	L1HS	aaagatgtggagctctaatgtagtcaccacgaaagcccatgattgccctatagggtattctgaagcagggacaggctcccagatttcttggtcgttgcgg<br>ggaaagcactgggccttcactccctttccacattgacagggcactggacatactcaccctaaggagagggcacacctgtgggtgaaacagctctccttag<br>ccaagaccaagagggctgagagctgagcactgctgctggccgtaccctcagtccctcccacctgaagggtgatcagggcagcttgtcacagcatttacca<br>aagcactctttacaattctacaaataaatttaccatttcagagctaatttttaaaaaatatataaaattaccaaaattcacttaat<font color="green"><u>AAAACATGGAAAAC<br></u></font><font color="red">TTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATT<br>TGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCT<br>CTTTGAAGCAATTGTGAATGGGAGTTCACTCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTG<br>TATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGG<br>ACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGTGG<br>TGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCT<br>CTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTG<br>AGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATTCAATG<br>CCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCTCCAAGTCAAT<br>CCTAAGCCAAAAGGACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCCACAGTAACCAAAACAGCATGGTACTGGTACCAAAAC<br>AGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGG<br>GAAAGGATTCCCTATTTAACAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAA<br>TTCAAGATGGATTAAAGATTTAAACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGAC<br>TTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCA<br>TCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAAACTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAAT<br>TTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAG<br>AAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAA<br>ACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATT<br>CCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGC<br>ACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATAT<br>ACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCA<br>AGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTG<br>TGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATAC<br>ATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAACATTTAAAAAAAAAAA</font><font color="green"><u>AAAACATGGAAAAC</u></font>ctaaa<br>agatattgtacccctgttaagcattttaataaaaagttgacaaactgtcccccaaactgtgcaatgaactgagattttagtggggagttgtattgagact<br>gcaaaaaaaaaaaaaccaataaaattataaaccaaacttatttataaatacagttgtcaaaatgtaaataaaacatggactaacataacccagccctgtg<br>gtataatgacatcatgcccaaatatggtttatttacgatatggggtataatacaataggatgtatgattatctcgatagatgtccctaaaagcgcattta<br>atttgtgtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagagagagagagattgatttctcatt	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI><LI>Bennett EA, Coleman LE, Tsui C, Pittard WS, Devine SE. Natural genetic variation caused by transposable elements in humans. Genetics. 2004 Oct;168(2):933-51.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15514065">PMID:15514065</a>.</LI></UL>	C:Reference; E:Insertion-specific detection:PCR	NA	60	2587	192	NA	intergenic	
0	chr4	44202023	44202488	2000222	0	-	L1HS393; RIP_L1_chr4_044_01	TACACAGAATCTGATGCTAGGAGAG	CGGGAACATAAAGTCATAGCGTAAC	LINE	L1	L1HS	atgcaaataagcagaaaaatacagcaaaatggtgaaaaattattaaagcaatccagaaagcaaacaaatgatagaatatttgcacccattagcaaaacca<br>gaatgacgctttttgtcagattataaacacctgaaggcctggaattacattttgtatttaatttataaatctcaaagggagagagacctgtagtatactt<br>gacccatcactgagagtgacatgagtgctaatttattaataacctgcatgtattatacaataataaatttttaaaaaattgacctcccattttacaaagt<br>acatttatatgtgttacattatttgttcataatataaaactggagaatagagccatttacacagaatctgatgctaggagaggttaaacaac<font color="green"><u>TTACTTAA<br></u></font><font color="red">GAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCT<br>TTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTG<br>AACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTA<br>ATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAG<br>TATAATAAAAAAAAAAAAAAAAAGTTTTAAATTTAAAAAAAAAAAAAAAAAAAAGATTATAGAATT</font><font color="green"><u>TTACTTAA</u></font>atactctagttttcttagttctttcc<br>atacattatagtgcctttctgttttattctgtaatgaaaggtcaactaaaagagaagagtttatactgaataacatagctttataaattcaatgtgatat<br>aaatttaatatgacattaacattaaaatttagagttgtcatttttatatggattataattctaatatcttgaatactctgtctgttacgctatgacttta<br>tgttcccgttaacaaatattttaaacaatgttgatttgtgttaggtgttggacatcctggaactcttaatggagtagtaacaccatctaaggctagccaa<br>tgtaaattgtggtctgaaaagcctttaagcactagccagtataccttgtggtgctattgcatcaag	UCSC	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	61	751	277	NA	intergenic	
0	chr15	51743408	51743409	2000223	0	+	L1HS404; RIP_L1_chr15_051_01	CCACCTTACGTTCAGCTGTTAAT	CGGTGATTAGGTGACAGCTTTT	LINE	L1	L1HS	agtagctatgaagctcttcaagagagtgaaataaatatcagtcagtttaccttctgggagttaaattagttaaaatgacacttgatgaatgagatttgct<br>cctgcagaccctagacatctgaaacgcataggtcaagagacattcccccggttctcagctaatactctgacatataatttccactataagatgctaactc<br>tgttatgaatagtgagcaacaaagacacatcaagatggggatgcttggcagctggctcagctcactcactgggctttattcactatagccttatgatacc<br>taagactgtcagtgtggttcaatttcccaccttacgttcagctgttaatgttgaagtttcaatgcatctctataactgtcctt<font color="green"><u>AGAAAAATGACCTTTTC<br></u></font><font color="red">GTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATT<br>GAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCA<br>TAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTG<br>TGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCGATTCAGAGATTCAACTTCTTC<br>CTGGTTTAGTTTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATG<br>GTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTA<br>GCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCT<br>GATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCC<br>AAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTG<br>ATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGG<br>CACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAA<br>TTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCATCTCAGCCCAAAATCTCCTTAAGCTGATAA<br>GCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGA<br>ACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTC<br>AAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTT<br>ACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCAT<br>TGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTAC<br>TGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAA<br>ACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTA<br>TACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGC<br>GTGGGCAAGGATTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAA<br>AAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGA<br>ACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAA<br>AAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTA<br>AAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTC<br>AGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTAT<br>AAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAA<br>TGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAG<br>TAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACA<br>CTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATG<br>GCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAA</font><font color="green"><u>AGAAAAATGACCTTTTC<br></u></font>aagttaagaataggaaaaataggttttaaaaacctaaagacaatggattaaatgagaaaagaaaaaaagctgtcacctaatcaccggtttcaatatctga<br>aggaggaaagtacaaacaaaagcaggtgttctaaatggagtcttaagaagagaaatacaaaattcagaaatgtttccatgcattattagctttgaccaag<br>ggagatggtactctgctgggctgaaagcattggctacattcaactctcagagctcagtgaatgaatatcctctgggctctgactccatttccatcaaggc<br>accctgtaatacaatttcccctggcctcagatttgctacagtgagaatgtaccaagcaataaccagaatgccaattaaagaat	Other	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	60	3262	163	NA	intron:WDR72:NM:182758:14/20	
0	chr14	42738619	42738620	2000224	0	-	L1HS561; RIP_L1_chr14_042_01	TACCCATTTAAAGGGCAAAGTG	CTACCCATTTAAACCACTAATGCTG	LINE	L1	L1HS	tcactggaatgaatgtgaaggcttaacttgactattttgaagatatcaaactcatttagtgtataagaaaaaattaattccatagttatacattataact<br>cttaaaagtctcagaaatagctaagtgaggagatttgaatgccagcaaagccactttgtaactccatgacatcaacattaaacattccattccatcccta<br>cctgtaaaattttcacattttttctcatattctcttaaatgcatttttctctctgtttgtatttaacaggaggaaaagtgcagttgatttggggaggaag<br>acttattctgagtaacaggagtaaaaagaggatagttttacccatttaaagggcaaagtgaaacatacaatataagattgcttttt<font color="green"><u>AAGAGTAACTCAGA<br></u></font><font color="red">CACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGA<br>GGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTG<br>CACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAATAAAAAATAAAAAAAAAATAAAGAGAAACAAATGACAAAAAAAAAAAAAAAAAAAAA<br>AA</font><font color="green"><u>AAGAGTAACTCAGA</u></font>aatttcaaaatacaaatttgaatagcagcattagtggtttaaatgggtagtgtattactcagggttctcaggagggacagaagc<br>aataggatacacgtatgtacaaagaggagttcattaaggagtattgattcatacaatcacaaggtgaagtcccacaataggccatctacaaattgaagag<br>caaagaagccagtccaagtcccaaaacctcgaaagtgtggaagccaacagtgcagccttcagtctgtggttaaaggcgcaagagtcccaaagctgaaact<br>cttgggagtttacctgatgtttaaaggcaggaagcatccagcacaggagaaaggtttagcctggaagactaagctagtctattccttcaacattcttctg<br>cc	Other	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	61	430	114	NA	intergenic	
0	chrX	42649558	42649559	2000225	0	+	L1HS564; RIP_L1_chrX_042_01	TGCAATTGACATAGATACTGCAGAG	CCCTTCCCTTTCTGTACATGTCTT	LINE	L1	L1HS	cacagagttgaaaaatgcaattgacatagatactgcagagtatctatgatgttagagtgtaggggttgcttttgttacctttactttccttgtcatcaaa<br>gttaagtcattatcagtttaaaataacctgttataactataagatattttgtaagcctcatggtaaccacaaacaaaatcctgtaatagatgcactataa<br>acaaatagtacagcatcaaaacatactgttagagaaaaacacttaagagcaggaaaacagaaagacagaaatggagaaaggatttacaaaagaaaaaaac<br>aaaaaaaataagtatcaaaatggcagtagaaaatccttacctatcaatatcattgaatgtaaatggattaaattcttcaattagaataaat<font color="green"><u>AGAGTGGTT<br></u></font><font color="red">ATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGAT<br>CCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAA<br>GATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTT<br>ACTGTTTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTA<br>AAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCATCCTACTCATCTGACAAAGGGCTAA<br>TATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGA<br>AGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCA<br>GTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAG<br>TTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGA<br>GTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATG<br>ATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTTGGGACATGGATGAAAT<br>TGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACA<br>CAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTTGGGGGAGGGGGTAGGGATAGTATTGGGAGATATACCTAATGCTAGATGACACATTAGTG<br>GGTGCAGCGCCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGACATGTACCCTAAAACTTATCGAGTATAATAAAAAAAATAAAATAA<br>AATAAAATAAAAATAAATGAAAAAAAAAAAAAAAGAGAAATGCCATATATAGTCAAAAGTTACTGACTTGTAGAAAGATTTAGCATGCATATCACAAGGA<br>CTAATGTCTTTTAAGTTTCAGAGCCCATGTGGATTTCTTCTTCAGTGAATAAATACATCCTTTAGCTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGA<br>ATAAAT</font><font color="green"><u>AGAGTGGTT</u></font>gagtgattttaaaaaacaagaaccaaatacatactgtctacaagaaactgacttcacctataaagacatgtacagaaagggaagg<br>gatagaaaaagtgaagaatgaaaaatattgcaatcaaatggacacaaaaaaagagcaagaatagatcttttactagtaactcttttttttaaagtagagt<br>ttaaataaagaatggcaaaaaaggacaaagaaggccattatataatgataacaagatcaatatagcaagagacatacaattttacatatatatgcactca<br>accctgaagcagccaaatatataaaacaaatattaatagacctaaaaagagagattagctacaatacaacaacagtaggggatatcaccacctcactttc<br>agcgat	Other	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	61	2085	471	NA	intergenic	
0	chr11	55075383	55075384	2000226	0	+	L1HS287; RIP_L1_chr11_055_01	CCTTTTATCTGAAATAAGTGGTTGG	CTTCCTTTAGCTGGGCTGTTCTAAG	LINE	L1	L1HS	aagtaattttagattaagagaaaggttgtgaagatagtatagagagcttctgtatactactcacttagtttcccttaatattttcttcttacactactat<br>ttgtgaagactatgaaatgaacgttgatatatactattaactaaacaccaggtttattcatatttgactattttttctcctgtcttttttctattctagg<br>attcaatcttaaacaacacatcacatttaagactcttttaaaatgatttaaaaccataaatcttgttatcatacattatgaagatgctatactttctatt<br>gtcaaagtttccacactaattttggaaattccttttatctgaaataagtggttggtttctttatatctactaaatattttaattc<font color="green"><u>TAAAATGTTATTCTT<br></u></font><font color="red">TTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAG<br>CCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGT<br>TTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTGTGTCCTGAATGGTAATGC<br>CTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAG<br>TTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATC<br>AGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTG<br>TAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCA<br>TATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGCATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAAT<br>CAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACA<br>CTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAG<br>CCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAA<br>GACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAG<br>TTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAG<br>GTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGGTCTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGG<br>AGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCT<br>AAAACTTAGAGTATAATAAAAAAAAAAAAAAAGAAGTTAAAAAAAAAAAATAAAATAAAATAAAAAAAAAAAAAATAAAAAAA</font><font color="green"><u>TAAAATGTTATTCTT</u></font>ct<br>tagaacagcccagctaaaggaagtggagagattaagaattgtttaattattagattaatatagaaccttgtctttctttccatctccaacttttatggag<br>ttttctatgtacaatgaagctatttgaaatagaagtggatatttgacagaatgggggccacagtactttattcagggattactaaagacatttaaaagtg<br>ttgtgcattttaaaatatcatgtctgcactgagacagaccaaataaaatatttaacatttttcaaaatttatttttatttttatttttttctcttttaaa<br>atttttttattatactttaagttctagggtacatgtgcacaacgtgcatgtttgttacatacgtatacatgtgccatgttggt	Other	<UL><LI>Myers JS, Vincent BJ, Udall H, Watkins WS, Morrish TA, Kilroy GE, Swergold GD,Henke J, Henke L, Moran JV, Jorde LB, Batzer MA. A comprehensive analysis of recently integrated human Ta L1 elements. Am J Hum Genet. 2002 Aug;71(2):312-26. Epub 2002 Jun 17.  <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12070800">PMID:12070800</a>.</LI></UL>	E:Insertion-specific detection:PCR; E:Insertion-specific detection:PCR	NA	61	1693	95	NA	intergenic	
0	chr9	112219202	112225295	2000227	0	+	L1HS260; RIP_L1_chr9_110_01	GGCAACGGAATAATAGCTTCA	GTCAGCACTCCCATCTTAAATGTCT	LINE	L1	L1HS	tagtcatctcatagcaaaacactaaaacaacaaagacaagtttttaaaaagtaaccaaagagaaaacatattacttatacagcaacaagaatttgaccag<br>agtttctcaatttcagcactactgacattgtggaccagatacttcttagttgtggaggactgttctgtacattgtaggatatttagcatttttcctagat<br>tctaactattagatgctagtagcatcttccccccagttgtgacaaccaaaaatgtctccagacattgccagatgtccttggagggcaatattgtccttga<br>ttgaggatcactaaattagactcataaaggaattctgaatagcaacattagaatcataaggcaacggaataatagcttcaaaatacttatg<font color="green"><u>GAAAAATTG<br></u></font><font color="red">GAGGAGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAG<br>GTACCGGGTTCATCTCACTAGGGAGTGCCAGACGGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACC<br>TGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCCAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTT<br>TTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAG<br>TCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTG<br>GGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCA<br>GACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTC<br>CCTGACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTAACACGGCAGGGTATTCCAACAGACCTGCAGCTGA<br>GGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAA<br>CCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGA<br>ACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAA<br>GAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTC<br>GAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGA<br>AGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCT<br>GAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTC<br>AGGAAATACAGAGAATGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTT<br>AAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGG<br>GGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCGTATCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTAT<br>AGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCG<br>CTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAA<br>ATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGT<br>GTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAG<br>GCAGAGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGATAAAGGGATCAATTC<br>AACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTC<br>CCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCT<br>CTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTG<br>ACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAG<br>GATTAAAAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACAGAACGAAATGAAGGCAGAAATAAAG<br>ATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCT<br>ACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCA<br>AGAAATAACTAAGATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACTCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAAC<br>AAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCA<br>CAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTAGGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCT<br>CCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCA<br>GGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCC<br>TCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACAT<br>TGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAA<br>GGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCT<br>TTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCAC<br>AGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTG<br>TTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGA<br>TTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATC<br>ACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATC<br>CAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCT<br>CATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCAC<br>AGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCACATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACA<br>CTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCT<br>CAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGA<br>AAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCCTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACCT<br>AAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAA<br>AAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAA<br>AATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAG<br>TGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGC<br>AAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAACAGG<br>AACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGAC<br>CCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATAGCGGCACTATTCACAATAG<br>CAAAGACTT